© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0044300.1
CCCGAATAAAATGTGGTGAAGACGGCAGTTATTTGTAGTAGGAAACATTGCAGTAACATAATAATCTACGCCCAAGACATCTTTACTTCGATTTTCATCTACACCTTAAGACATCTTTCTATACTTCGATTTAATCAGTAATAAAGGCTGAAATGACAGAAGTATGATAAATTTCCTCAGAAAAGTTGACAACTAGGCCTGAACATCTATATTCACACAGATTGACAGTATGATGCAATGTATGTCTTTGCTAGTCACGAACCTACGTGTTCGCCGGATTAAGCCGCTTCAACAGCACTGCATCCAGGAGATTTCCTCACATCAGTATCAGCCATACATTGCCTGACGTTCATAGCTTCGCTCCATCTATGAGCACTCGCATATGCATTGCTTAACAGAGTATAGTTTCCGCTGTTGCTGGGCTCTAACTCATTGAGCTTCTTGGTGACGATCTCTGCAATGGCTACATCACCATGCGTATTGCATGATCCCAGAAGTATCCTCCAAACAACAGGGTCAGGATCTATGGGCATCTCAGTGATGAATCTCAGTGCCTTCTCCAACTGACCAGCACGGCCGAGGAGATCAACAACACAGCCGTAATGCTTCATCTGGGGTTCTAAGCTGTAAAGTCTTTTCATGCTTTCGAAGTGGTCAAGCCCTTCCTCAACAAGCTTAGCGTTCGCGCAAGCGATCAGTACACCAAGGAAAGTGACTCCATTTGGTCTGAATCCTTCAGTAAGCATAGCTTGAAACAAATTCAGAGATTCCTTCTCGAAGCCATTGTTTGCTAGCCCAATTATGATTGAGTTCCATGACAAGGTGTCCTTCTCCTTCATTTCTTTGAACACTTGCAATGCTTCCTTGGCACTTCCACATTTCATATACATGTCAATCAGAGAATTCTCCATAATGGTGTCAGCTTTGATGTTGTTTCTCCTCACGTACTCATGAACCCACTTACCAAGATCAAGTGCACCCAAATGTGCGCAAGAAGACACTACACTGGCAATCACAATGGCATCTGGTTTCACCTTGGCTCTCTGCATTTGCCTGAAGATCTCAAGAGCATCAGAGAAGTGATTAGCTTGTGAATATCCAGATATCATAGAACTCCATGAAATCAAATCTTTCTTAGGAATTTGATCGAATATTTTCCTTGCTGAAACTATATCTTGTCCTTTTGCATATGCAGCGATCATTGCATTCATTGTTACAATGTTCCTAACCTTCATGTTAAAGAACACCTTTTCAGCTGATTGTAACTGTCCACGTCTTCCAAAGTAATCTACCAATGTATTGCCCAAGTAAACATCCACCTCAATGCAATAATCCTCTATGTACCTGACCATGTAATCTGCCATGCTATAATCTCCTAAACGAGTACACGCAGAAACAACCTTGATCATTGTAACCTTATCAGCTTTCACTCCTTCATTCTGCATTAACTTGAACAGTGCCAAAATATCTTTAAATCTATTGCACTGGCTATATCCACAGATCAGCGAATTCCAGGATACAACATCCTTAACTACCATCTCATCAAAAACAGATCTTGCATAACAAAGATTACCACAGGCAGCATATAGATGAATCAACGAATTGCTAACAAAGATATCTGAAAGAAGACCAAGTTTTGTTATATGGTTGTGCATCTGTTCCCCTTCATTGAGAGCATTGATTCTAGCACAGGCCTTTAGTATGAATGGAAATGTCAGGTTGTCTGGCACCATTCCTCCTCCTTGTGCCTTCTTGTAGAAAGCAATGGCATCTGCCGGTGCATCACTTTGAGCAAGCCCTCTAATTAGGATATTCCAAAGAAAAGTGGTTGGTGCTTCAATCTGATCAAACACTTTATGAGCAAAAACCAAATCTGGTTGGAGAATGGCATAGGATCTGAGAACCTTAGACATTGCATAATGGCAATTGTACAGCCCAGAAACGATGTAATAGGCATGAAGCCTTTTTATGGCTTCCATCCTTACAATGTTGAAAAATGACTGAATTGTTCCATAAACAATGAGCTAGTTAAGGATGAGCAAGGACTGGATATAGTTCAGTACATCTGCTTCCTTGGGTTGCACTTGCACTTGCGCTCGGATCGGCAGCGTAAATGCGACGGGGAAGACGAAGCAAACGCCAAGGCGGGAATGCAGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0044300.1 | 1 | 34685689 | G | A |
| Osa01LNT0044300.1 | 1 | 34686134 | T | C |
| Osa01LNT0044300.1 | 1 | 34686465 | T | A |
| Osa01LNT0044300.1 | 1 | 34687042 | G | C |
| Osa01LNT0044300.1 | 1 | 34687117 | A | T |
| Osa01LNT0044300.1 | 1 | 34687894 | C | T |
| Osa01LNT0044300.1 | 1 | 34688081 | A | G |
| Osa01LNT0044300.1 | 1 | 34688809 | T | C |
| Osa01LNT0044300.1 | 1 | 34688921 | T | C |
| Osa01LNT0044300.1 | 1 | 34689031 | T | C |
| Osa01LNT0044300.1 | 1 | 34689116 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0044300.1 | osa-miR5530 | Translation | 4.0 | 19.752 | 1 | 21 |
| Osa01LNT0044300.1 | osa-miR5793 | Cleavage | 5.0 | 11.458 | 1 | 21 |
| Osa01LNT0044300.1 | osa-miR399a | Cleavage | 5.0 | 10.222 | 1 | 21 |
| Osa01LNT0044300.1 | osa-miR399b | Cleavage | 5.0 | 10.222 | 1 | 21 |
| Osa01LNT0044300.1 | osa-miR399c | Cleavage | 5.0 | 10.222 | 1 | 21 |
| Osa01LNT0044300.1 | osa-miR167h-3p | Translation | 4.5 | 12.594 | 1 | 21 |
| Osa01LNT0044300.1 | osa-miR171h | Translation | 4.5 | 15.51 | 1 | 21 |
| Osa01LNT0044300.1 | osa-miR1854-3p | Cleavage | 5.0 | 17.236 | 1 | 22 |
| Osa01LNT0044300.1 | osa-miR1876 | Cleavage | 4.5 | 15.191 | 1 | 24 |
| Osa01LNT0044300.1 | osa-miR2091-3p | Translation | 5.0 | 12.032 | 1 | 22 |
| Osa01LNT0044300.1 | osa-miR2095-5p | Translation | 3.5 | 9.118 | 1 | 22 |
| Osa01LNT0044300.1 | osa-miR1863c | Cleavage | 5.0 | 15.985 | 1 | 24 |
| Osa01LNT0044300.1 | osa-miR5519 | Cleavage | 4.0 | 20.605 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0044300.1 | 1 | qLEJ-1 | Morphological trait | Shoot/Seedling | RM212 | RM297 |
| Osa01LNT0044300.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0044300.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0044300.1 | 1 | Pi35(t) | Resistance or Tolerance | Blast resistance | RM1216 | RM1003 |
| Osa01LNT0044300.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0044300.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM543 | RM472 |
| Osa01LNT0044300.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0044300.1 | 1 | ng1 | Morphological trait | Panicle/flower | RG374 | RG394 |
| Osa01LNT0044300.1 | 1 | ng1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0044300.1 | 1 | sf1 | Physiological trait | Source activity | RG374 | RG394 |
| Osa01LNT0044300.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0044300.1 | 1 | sf1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0044300.1 | 1 | nan | Physiological trait | Source activity | RG374 | RG690 |
| Osa01LNT0044300.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0044300.1 | 1 | nan | Morphological trait | Root | RM212 | R2417 |
| Osa01LNT0044300.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)