© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0003100.1
GCTCCTTCAACCCCACTCAATATATAAATTTCAAAACCTTTCAGCACATGAATTGAATTCCTAAGCCCTAACAAGTAACAACCACCCCTCCAAACCTTGTTCTCTTCAAGGAGAGAACAGAAAGAATGTTAATATATACATGAGGATAATAGCATTCCACCATATAGAACAGCTAAACCAACAAAATTTTTAGGGGCAAAATAAAAAAACTAGCTAGGCTCAAAACTTTGCAAGCTGAAGAGTGAACTCTGTCAGAAGCCTGTCAAACACAAAGTCTGCCAACATGTTCCCCAAGTGATCAGCATCTCTCTGAAAATTCACCCAGTGATCGTTCTTGGATAGATCATTCGACAAAATTGTGTCAATTTCTATGCTGGACTGTGGCTGTTCATCCAGATGGCAGCTTACTTTAGACCACAATTCCTTGAGGGCATGGTTTCCCACAGGTTTCGGTCTATCAAAAGACGAAAACCGGGAGAGCAAGGACTTGGAAACAGAATATTTCTTGTAGATGTCGAGCAACACTTCATTTGTCAAGTCAGACAGAAGTAGCTGATCAGCTGACATCTCAGTGAAATCAAATGCAGCGGCAGCAGCCTCGTAGTGTTGGCAATCCTCTTCTTGGAGAACTGTAATGTTCTGTGAGCACCATTCATCAAATAGTACTTCATTGCGGAAGCTTGATTTCATGAATATATTCTTCACATAGATCAACCCATCTTCATTCTTTGGATCTGCTTGGAGAGAGCTTAGTTCATCAGAGTCACTTTCTTGAACATTTTTGTGACCCAGGCCAGCAGTTGAAAGTTCCATGGAAGTGCTGGTATTGAGATCCATATCAGCTGAATCATCGGTATCACTTAAATGGAGGACTCTTGGCTTCAACGACGAATCATCCAGGATTGTATATTTCACTGGACTAGCAGGATCATCTGGGAAGGTCATGTCAAGAACAGACATTGGACTATCAGTTTCTTGTTCACAGCTTAGATTTATCTCAGCTTCAATTTCTTGACTGGGACGAGGAACACAAAAAGTACCTTCTCTTGACTTCAGAACATCGGATGAATGAATTTGTTTGTCATCTGAAGTTGTTGTATGTTCTTCTGAAATCCTTCCGTCTTCTGAAACTTTAGTAGTATGCATACCTGCTTCTGTTGACAAATTAGTATGGTCATCGTCACAAGTTGTTCCATGTTCTTCTGGGACATCAATTTCTTCTGATTTTGAATGAACAGTACACATATTATCTTCAGTTGATGAGTGAACCTGATCGTCATCACAAGTTGCTACATGCCCCTGTGAAATATCAATCACTTCTGAAAGTAAAGGGGGAGTACATATATTAGCTTCAGTTGACACAGAAACACCACACTTTTTGTCAACGATGTACTCTTCGATTAACACAGTATTTTCAGAGCCATCAGCATCCTTATGACCAGAGATCTCATCCATAGCAGCATCCACATCTCCATCCACAATAATTCTCTCTGGAACATATGGTGCCAAGGCATGTTCTGGGATCACGAGATTTTCAGCAGTCATAACCAAACTCTGCAACCCAGTCATCACAGCAGGCGCATCCAAAGAATGATCCCTAGTAGATTTTGAACTTGTCAGCGTCCTCTTCGACTGGTTGCTTGAAATAGAATCCAGCAAGTGAGAATATTTCTCCAATGATTCAGTGAGGGAACGTGAACGCCGAAAACCTTGGTTTACAGGTCTTTTTGCAGCAGTTACAGTATAAGATTTCAAACCATCCCTGTCATATGTGGCGGAGGCTGACCGGGAAAGTCCTTCTTTAATTACATCTTCAGATGCCTTATGTCCATAAGGGACCTTATGAAGAACTCCATCCATTGAAATGCTACGGTGGCTCCTTTGTTTCACATGAATGTCACCTCTCTTTAGAAGCGAAGAACTTGTATCATTATCGCAACCATCCTGGGTGTTGAATGTAGCATTTTGGATATTTGTATCTGTGGAATTTGGCATAATACTTTGTGAAGAACCATCACCATTGGAAGCAGATTCACCATCAAGAACATACTCATTGCTTTCCAGGTAATGTATTGAAAGGGTACGGAGTAGCTTCGGTGCAACAGGAAGCATCTTTTCTTTATGGCCTTCCTTTCCATACAGCTTTTTTAGAATCAAGGAGCCCAAACTTCCCTTACCAGAACTCTTTTTTGAAGACTTGTTTTTCTTTGTTGTCTCAGTGTGTTTGTCATCGTCCATGACACTAGTGTCTTCATCTTTCAGTGGAACATATGAACCTCGGCGTCTACTTCCACCACTGCCTTTTCCCTGACTCTGTTTCTTGTCAGAGATCATCTTAGTGGATCGCAGGCGGCGACGGAAGCCAAAGAACTGAAGAATGCTCCATCGGCGCCCATGGAGTTCCTTCCCATAAAACGCGGAGTCCTGATGGTGCAACAGCTGGGCCATTTGGTGTTAGCCCGTCAACAAAGGTAGGAGGAGTGGTTCCTTATAAGCACCACCTTTGCAGAATAAGGAACAATTCCTCAACTTTTCTTTAAACCTTCGATTTCAGATGACGCCTGCAGCCGACGCAACCCAGAAAAAAAGGGATTTGGTGTCCGATTCGAGGGTTTGGTGGTGCTTTTGCCGCAAGGAGGGAGTTGGTGAAATGGAAAGTTGGAGGAAACGCGAATTCCCCGAATAAGAACGGGAGGAGGAAGAGGAAAGGATCGCAAGTGCGAGGAATGGGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0003100.1 | 1 | 2702094 | G | A |
| Osa01LNT0003100.1 | 1 | 2699862 | T | C |
| Osa01LNT0003100.1 | 1 | 2700617 | A | G |
| Osa01LNT0003100.1 | 1 | 2700866 | A | C |
| Osa01LNT0003100.1 | 1 | 2701689 | T | A |
| Osa01LNT0003100.1 | 1 | 2701715 | G | T |
| Osa01LNT0003100.1 | 1 | 2701794 | T | C |
| Osa01LNT0003100.1 | 1 | 2701958 | T | G |
| Osa01LNT0003100.1 | 1 | 2702246 | A | T |
| Osa01LNT0003100.1 | 1 | 2702598 | C | T |
| Osa01LNT0003100.1 | 1 | 2702870 | T | A |
| Osa01LNT0003100.1 | 1 | 2702892 | A | G |
| Osa01LNT0003100.1 | 1 | 2703459 | T | C |
| Osa01LNT0003100.1 | 1 | 2703674 | T | C |
| Osa01LNT0003100.1 | 1 | 2703808 | G | A |
| Osa01LNT0003100.1 | 1 | 2704225 | T | C |
| Osa01LNT0003100.1 | 1 | 2701848 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0003100.1 | osa-miR5792 | Translation | 4.0 | 14.754 | 1 | 24 |
| Osa01LNT0003100.1 | osa-miR5823 | Translation | 5.0 | 16.574 | 1 | 24 |
| Osa01LNT0003100.1 | osa-miR5837.1 | Translation | 5.0 | 20.726 | 1 | 21 |
| Osa01LNT0003100.1 | osa-miR156l-5p | Translation | 4.5 | 14.969 | 1 | 21 |
| Osa01LNT0003100.1 | osa-miR167e-3p | Translation | 4.5 | 17.357 | 1 | 21 |
| Osa01LNT0003100.1 | osa-miR167i-3p | Translation | 4.5 | 17.357 | 1 | 21 |
| Osa01LNT0003100.1 | osa-miR171d-5p | Translation | 4.5 | 17.696 | 1 | 21 |
| Osa01LNT0003100.1 | osa-miR1439 | Translation | 4.5 | 14.8 | 1 | 21 |
| Osa01LNT0003100.1 | osa-miR1865-5p | Translation | 5.0 | 14.274 | 1 | 24 |
| Osa01LNT0003100.1 | osa-miR2921 | Translation | 4.5 | 19.093 | 1 | 24 |
| Osa01LNT0003100.1 | osa-miR5147 | Cleavage | 4.5 | 11.151 | 1 | 21 |
| Osa01LNT0003100.1 | osa-miR5502 | Cleavage | 4.5 | 18.824 | 1 | 22 |
| Osa01LNT0003100.1 | osa-miR5524 | Cleavage | 4.0 | 14.908 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0003100.1 | 1 | gp1a | Morphological trait | Panicle/flower | RM1 | R753 |
| Osa01LNT0003100.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Osa01LNT0003100.1 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0003100.1 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)