© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0044700.1
GATGTACATATATCCTGAAGCTATCGTAATACACAATTGTGAAATAATACATTGGGCATAATCATGTCCATATAAATGATTGGGCTAGTTTACAAAATGGGAATATTCTCGACAGAAAGCGAAAGAAAAAAAAAGAAAAGAAAAATTCATCCTTGTACAACACTTGTATGACGATGGCGCTTCACATCCCAGTTGAAGACGTCCTGCCTATTCTTTGTGCGCCAAGCTTTGGCTGAGCTGGCTTTGTTCCTCGACCCCTACCTGATGAAGCTAGAGGTCTAGCTTTGGTTGATGGTGGGGGTGCAGCGATGGCACCCCATAAATCGTCACTGTTTGCTGCTGCTGGTGGCTTCAAGGGCTTCCCAGCTGATTTCGGTGGAGGTGCAGCTATCGAACCCCAGAGGTCATCGTCATCATTGTGCGACGTTGAAGGTTTGATGTCTGAAGACTTCGATGCATTTTTGGGTGCTGGAGCAGCTATAGAACCCCATAGAGGATCCTCTTCTGGTTTGGGCACCTTTGGTTGATTTAATCTTGACGAATTTGATACTGGTTGTTTTGGTTGCGCCACAGGACGTTTCTGAGCAGCCTGTATGTTAGAGAGAAGAGATGGTGGAGGCTTCTCGTCAAACGGATCTACATCATCCCATCCTTCTTTATCACTACCATTCTCTTCCTGAGTATTATCGTTTTCAATTTCACCCCACCCATCCACCGAGGACCTTGCTGATGCTGGTGCAGTTTGATCAAGAGAGCTAGAAGTGGATGGTGCATATGCTACGGTGGAAGATCTATTATCTGATGTGACACTGGAGGTTGCTGAAATTTGAGAGTTGCTAGCATTTGCACTAGAAACCGGACCATGGTCAGAACCTTTTCCCTTCTGAGTAAGAGAACTCATAGCCCACCCAAGTAAACCAGCATTTCCAGGCTTTAACTGGATACCAGTAGCTTCGGCTGCGCTGTTGTCTCCCATAGTAAGCTTTTCATGATGTTGTTTTGCTATTTGCAAGAATTGATCAGTAGCCTGGAAAGCCTTGGTCCTCACATCACTATCTGGATCAAATGTGAGGACAACAACGTTAGGCAGAATACGAGTTGCAATCTCTGTCATTTCATAGTATGAACTAGTGACACTTAGCGCCATGATGCCAGCTGCTCGAGCAGGGGGGAAGGTATCACGTAATGCACGGACAGTAAATGCGTTGATCAATACCCTTTTCCTAGTCCCATCATTCATGTAGTTTGCAATATTTCCAAGAAGAATTGTAGTGTTTGTCCTGATCGCAGGTTCTTCATCAACCTGGAGCTTAGATAGATACTTCAAGAGAGATCCTGAAATCGTACGCTGAGATAACTACAGTAACAGATTGGTGAATTAGTCATAAAGAAGCAATAATCTTCCTGAAAAAATAATACCACAGAAATTTGCAATCCCAGGATTTTTTTTTCTTTAAAAGCCCGCTGTGCACACAACCAGAGAGAGCGATAGATAAATTTAGAACACTTTTTAAAAAGAAAACTGTTAACACAGCACAATCAGTAAAAATGAAAGACATCCACAAGGATTTTGTTCGGGGTGCAAATGTTGATCATGCAGAGGGTTGGGAGGGTCTTACTTTGGGTGCCAATACAAGCATAGACTTCAAGGTCAGTTCACGAAGAAAAGCAGAAGTATCAGAGAACCCAGTGGCAACATGGGGGAAAACTTGCTCATCAACAGTTTGAGCTGTCAATGACTCCCCAAACTGATCTATGTGCTGCAAAAGGCTAACTCGGATAGCTCGGTCATTAGAGGCAAAAAGCTTCACAATTGTAGGCAAAACCTTTGCACTAAATTGGTCAGCTGGAAGCCAGGAACCCATCTTCAACAATACAACCAAGGCTGGTGCAGCAGCTGAACCAAACTCAAGAGCAGATGCCAGCACAGGGAGCAACTTTTTCAGGACTATCTCACGAGGAAGCTGCTCAGCTATGTTCGGTAGTTTACGGAAAAAGCTATCTTTCTCAACACTGTCCTTTAAGTTAAGAACTTCCATGAACTGTATGGTCTCTACTAACTTGTTCTGGAAAAACTCACTGTTGTCAATAAGTTTAGAAGGGTTCATTCTACGAGAAGGGGCAGAACTCAAGAGCCTCTGGTAATCTGGAAGTAAAGACTTTGGGATTGAAGCAGTGTTCCGAAGGTCCTCTGTCCTGGTTAGCTTTGCACCAGAAAAGAGCTCATAAATTAAACACCCCAGTCCCCAGGAATCAATTGCCCATGGAGGTGATTTCCTAATTGACACCCAATCTGACTTTGTTAGCTCCATTGGCTTATATTGTGTTCCAACTAACCATTCAAATTGCAACATGGGGCTATTAGAGGCTTCGTTGTTAGCATCAAATTCAGAAAGAACATCAAAAGCATGAAGCTTCCAATCTAGAGTTTGAGTAACAACTACGCTCGTCACGCATACATTCCCGTGAACAAGCTTGCAGTCGTTGTTGAGAAAGCTCACAGCTTTTGATATCTGGTGAAGACCCCAAGCAAAGTACTCATCTCTCTGTGTGCCTCCCAGGTTCAGTTCCTTAAGCTTTTCTGAAAGTGGCGTAACAGGCTCTGTTACAATATAAATTGTATGCTTCATGGCAGGTCCATCAGGAACTTCTGCTTCAGTACTGTGAAGAAAGGATAAAATGTTTGGATGACGCACTGTTCGTAATCTCTTAACACCATTCCGACCAGCAACCAAGTGCCTGTCCTGAGGATTGCTCCCTGACAGAGAAAAGATTGACACGGGCGACCCATCATCCTTGGAGGTGCCGCGGTGGTGCGTCCACGAGCCCCACGCGGAGGCGTAGGGCTCGCCGATGGTGTAGGGGAAGTCCTTGAGGCCCGATCCGGATCCCGCGACCACCTCCTTGAGGAACTTGAACATTCTGCCCTAGGATTATCCCGGCGCGATTCCCCCCTCGGGTTTTTTCGATCGCCTCCTCCCCGCGCGGCCGCCGGTGGGTTCCGCCCGCCGACGCGGCGCCGAGGTAGATCCGGGCGGGCAGGAGGAGGCGTCGGGTGAAGCGGAGGAGAAGGGGGGAGGTAACAGAGGGCTCGGTGGCGGGGGCCTA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0044700.1 | 1 | 34949186 | T | A |
| Osa01LNT0044700.1 | 1 | 34949510 | G | C |
| Osa01LNT0044700.1 | 1 | 34949606 | C | T |
| Osa01LNT0044700.1 | 1 | 34950900 | T | C |
| Osa01LNT0044700.1 | 1 | 34951253 | T | C |
| Osa01LNT0044700.1 | 1 | 34951415 | T | G |
| Osa01LNT0044700.1 | 1 | 34952175 | G | A |
| Osa01LNT0044700.1 | 1 | 34952549 | T | G |
| Osa01LNT0044700.1 | 1 | 34953662 | T | C |
| Osa01LNT0044700.1 | 1 | 34953962 | G | A |
| Osa01LNT0044700.1 | 1 | 34954642 | C | T |
| Osa01LNT0044700.1 | 1 | 34955289 | A | C |
| Osa01LNT0044700.1 | 1 | 34955300 | A | C |
| Osa01LNT0044700.1 | 1 | 34955910 | T | C |
| Osa01LNT0044700.1 | 1 | 34955967 | C | T |
| Osa01LNT0044700.1 | 1 | 34956595 | G | A |
| Osa01LNT0044700.1 | 1 | 34957009 | A | G |
| Osa01LNT0044700.1 | 1 | 34957295 | T | G |
| Osa01LNT0044700.1 | 1 | 34959145 | A | G |
| Osa01LNT0044700.1 | 1 | 34959280 | A | G |
| Osa01LNT0044700.1 | 1 | 34953765 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0044700.1 | osa-miR5535 | Cleavage | 4.0 | 18.961 | 1 | 22 |
| Osa01LNT0044700.1 | osa-miR5812 | Translation | 3.5 | 16.433 | 1 | 24 |
| Osa01LNT0044700.1 | osa-miR6250 | Cleavage | 5.0 | 14.471 | 1 | 22 |
| Osa01LNT0044700.1 | osa-miR167c-3p | Cleavage | 5.0 | 19.202 | 1 | 23 |
| Osa01LNT0044700.1 | osa-miR171a | Translation | 4.5 | 18.904 | 1 | 21 |
| Osa01LNT0044700.1 | osa-miR166k-3p | Translation | 4.5 | 21.233 | 1 | 21 |
| Osa01LNT0044700.1 | osa-miR166l-3p | Translation | 4.5 | 21.233 | 1 | 21 |
| Osa01LNT0044700.1 | osa-miR171b | Translation | 5.0 | 18.904 | 1 | 21 |
| Osa01LNT0044700.1 | osa-miR171b | Translation | 5.0 | 8.781 | 1 | 21 |
| Osa01LNT0044700.1 | osa-miR171b | Translation | 5.0 | 20.836 | 1 | 21 |
| Osa01LNT0044700.1 | osa-miR171c-3p | Translation | 5.0 | 18.904 | 1 | 21 |
| Osa01LNT0044700.1 | osa-miR171c-3p | Translation | 5.0 | 8.781 | 1 | 21 |
| Osa01LNT0044700.1 | osa-miR171c-3p | Translation | 5.0 | 20.836 | 1 | 21 |
| Osa01LNT0044700.1 | osa-miR171d-3p | Translation | 5.0 | 18.904 | 1 | 21 |
| Osa01LNT0044700.1 | osa-miR171d-3p | Translation | 5.0 | 8.781 | 1 | 21 |
| Osa01LNT0044700.1 | osa-miR171d-3p | Translation | 5.0 | 20.836 | 1 | 21 |
| Osa01LNT0044700.1 | osa-miR171e-3p | Translation | 5.0 | 18.904 | 1 | 21 |
| Osa01LNT0044700.1 | osa-miR171e-3p | Translation | 5.0 | 8.781 | 1 | 21 |
| Osa01LNT0044700.1 | osa-miR171e-3p | Translation | 5.0 | 20.836 | 1 | 21 |
| Osa01LNT0044700.1 | osa-miR171f-3p | Translation | 5.0 | 18.904 | 1 | 21 |
| Osa01LNT0044700.1 | osa-miR171f-3p | Translation | 5.0 | 8.781 | 1 | 21 |
| Osa01LNT0044700.1 | osa-miR171f-3p | Translation | 5.0 | 20.836 | 1 | 21 |
| Osa01LNT0044700.1 | osa-miR1870-3p | Cleavage | 4.0 | 14.712 | 1 | 24 |
| Osa01LNT0044700.1 | osa-miR2055 | Translation | 4.0 | 17.666 | 1 | 21 |
| Osa01LNT0044700.1 | osa-miR2100-5p | Translation | 5.0 | 17.54 | 1 | 22 |
| Osa01LNT0044700.1 | osa-miR396f-3p | Translation | 3.5 | 12.636 | 1 | 24 |
| Osa01LNT0044700.1 | osa-miR2118d | Translation | 5.0 | 15.773 | 1 | 22 |
| Osa01LNT0044700.1 | osa-miR2870 | Cleavage | 3.5 | 18.0 | 1 | 21 |
| Osa01LNT0044700.1 | osa-miR5484 | Translation | 5.0 | 17.525 | 1 | 21 |
| Osa01LNT0044700.1 | osa-miR5503 | Cleavage | 5.0 | 15.268 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0044700.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0044700.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0044700.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0044700.1 | 1 | sf1.1 | Physiological trait | Sterility | RM212 | RM315 |
| Osa01LNT0044700.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0044700.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0044700.1 | 1 | Pi35(t) | Resistance or Tolerance | Blast resistance | RM1216 | RM1003 |
| Osa01LNT0044700.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM543 | RM472 |
| Osa01LNT0044700.1 | 1 | Pi37 | Resistance or Tolerance | Blast resistance | nan | nan |
| Osa01LNT0044700.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0044700.1 | 1 | ng1 | Morphological trait | Panicle/flower | RG374 | RG394 |
| Osa01LNT0044700.1 | 1 | ng1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0044700.1 | 1 | sf1 | Physiological trait | Source activity | RG374 | RG394 |
| Osa01LNT0044700.1 | 1 | nan | Physiological trait | Source activity | RG374 | RG690 |
| Osa01LNT0044700.1 | 1 | sf1 | Morphological trait | Seed | RG374 | RG394 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)