© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0045000.1
AGGATGAACTCTTCGTATTTTTATATTCCATTCTTAAAAAACAATTCTGTAACACTCCAGTAAAAAGCATAACTTTGGGGTAACATTTTACAGTGTAAAGGAAAAACAGCATGCATTACGTATACCACATATTTATCCACGTCGGGACAACTCACTGAGCAAGCTATCTAAGCTTGGCAGAAAATCAGAAGCTCCTATGTACTGCAAATGTGCGCAATTACTTGACTGGAACAAACTAACTTTAATTTGCGCGTCAAACCACTTGGTAGTTATAAGTAACCAATCGATTCCTCTGAGAAAACTTTGGTGGGCTACCTTCCCTCAGCGGACGGATGGCGGTCACCTTCAAATCACTAAATGTATTTGATGCAGAAAACCCAACAGATATCGGGAAGAATGTTGATGGATCAGCTGCAGGGACAGTGAACTCCAAAGAACCACTGCGGTTTGATTGATCAACAAGAATAATGGACCACTCCAACACTGAATTTCTTGAGTCATACCTCCATTCTCCGTCTATCTGCCTAACACCTGGAGCCTCCCTAAGTGCGGGGAGAGGGATAGAGATGACAACATTGTGCAAATCAAACATCTCTGAAGCTTCATATTCAATGTTCACATAGGTTTCATTTCCGGACACCGAAGGCCAACAGTTCACTGCCAATGGAAGAGATGACTCATTCAACTCCTGGATTCTCCATTTCACCAACGGTGTTTCATTTTGACCACTGGGGAAAGGCCTGTTTGGATCTTTTGCCCCCACAATTTGTTGACTGTTGAATAACTCTTTGTTGATATTGGGGTGTGTCTTGAAGTTAAGGCCAGGTACATCTTGGTTCTCAATCTGTAACTGAATAAAACCATCAGTGTCATTCAGAATTTGGAGAGCCAGGGTTCCTTGAATATCAAAATTGCTAACTCCCCCATCCCTTTTAACAGTGACATTGAGCTTCTCTTCAATTGTCACTGTGATAGGATCGCTTGGTGGGATATATGATGACCTTGATTGAGTTGCACTTGGTTGAGTGTCCTCCAAAATGACTTCTCCTTCAGCTTTCAAAGACTCAAGGAACTGGTTTGTCTTCTGTGCTTTGCTTAATTTCATACCACCAGGAACTTTAGTAGAAGCAGATGCAGGAGCAGGAGCAGATGGGCGGCCTTTGGCCTTGTGGGTGAACGAGTCCATATCACCAAATATAGGATCGCCCCCTGGACCACCACCTCTAATGCCCATGTCACTGAAGCTGTTTGGAGTTCTCAAGGATCCAAATCCTCCCTTGTCAGGCTTCCCTCTATCAGTCTTGCTTTTCTCAATCTCAGTGACTTTCCTCCTCATGACATCCTTAGTTTCATTTATTTTGCTTTGCATAACCAGCTTGTGCAGCTTTTCTTCATGGCTCTCCATTTCACAGTATTGTTTAACTTGTGCAACAGTTACGTTCTCTTTGTTTCCAAGAGAAATGGCTTCAATAAAGGCAAACAGAAGCTCGAATGCTGCCTTACAGACACCCTCTTCATCCAAAGAGGGAGCATATTCAGGTATAAGCTTGGAGAGTAGCCTTAAAGTATCCAGATCTTCAAGAATGTTACTTTGCTTATTTGTGATGAGAAGCAAATACAGTGCTTCAATTGGTTGATAGACATAACGAACATTTTCAGTCTCAACATAAGTATGTTGCTTTCCACTTCCGACCAGCTTCGGAAATGCTGCAAGCAGCCCATCGATCCTTATCCGGGACATGTCAACAAATTGTCTCGAAACAAGAGCTTTTCCAGACTTCGATATAATAGAAGCTGCAAGAACCACCATTTTGAATGGCCTTTTTAGTTCCAGGGATTACCAAATCCAAGTTGACAAGATATAGAACTCAGATCCGCGAGGGAAGGGAGGAGCCGAGCCGAGGACGACGACGCAGGCAACAGTGAGCTCGCTCGCTCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0045000.1 | 1 | 35701753 | G | C |
| Osa01LNT0045000.1 | 1 | 35702316 | A | T |
| Osa01LNT0045000.1 | 1 | 35702539 | A | C |
| Osa01LNT0045000.1 | 1 | 35704301 | A | G |
| Osa01LNT0045000.1 | 1 | 35704897 | C | T |
| Osa01LNT0045000.1 | 1 | 35706489 | T | C |
| Osa01LNT0045000.1 | 1 | 35706543 | T | G |
| Osa01LNT0045000.1 | 1 | 35707332 | T | C |
| Osa01LNT0045000.1 | 1 | 35707843 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0045000.1 | osa-miR5818 | Cleavage | 4.5 | 12.109 | 1 | 21 |
| Osa01LNT0045000.1 | osa-miR5837.2 | Cleavage | 4.5 | 18.494 | 1 | 21 |
| Osa01LNT0045000.1 | osa-miR5837.2 | Translation | 5.0 | 23.005 | 1 | 21 |
| Osa01LNT0045000.1 | osa-miR396a-3p | Translation | 4.5 | 9.604 | 1 | 20 |
| Osa01LNT0045000.1 | osa-miR396b-3p | Translation | 4.5 | 9.604 | 1 | 20 |
| Osa01LNT0045000.1 | osa-miR439a | Cleavage | 3.5 | 24.229 | 1 | 21 |
| Osa01LNT0045000.1 | osa-miR439b | Cleavage | 3.5 | 24.229 | 1 | 21 |
| Osa01LNT0045000.1 | osa-miR439c | Cleavage | 3.5 | 24.229 | 1 | 21 |
| Osa01LNT0045000.1 | osa-miR439d | Cleavage | 3.5 | 24.229 | 1 | 21 |
| Osa01LNT0045000.1 | osa-miR439e | Cleavage | 3.5 | 24.229 | 1 | 21 |
| Osa01LNT0045000.1 | osa-miR439f | Cleavage | 3.5 | 24.229 | 1 | 21 |
| Osa01LNT0045000.1 | osa-miR439g | Cleavage | 3.5 | 24.229 | 1 | 21 |
| Osa01LNT0045000.1 | osa-miR439h | Cleavage | 3.5 | 24.229 | 1 | 21 |
| Osa01LNT0045000.1 | osa-miR439i | Cleavage | 3.5 | 24.229 | 1 | 21 |
| Osa01LNT0045000.1 | osa-miR1846c-3p | Cleavage | 5.0 | 22.366 | 1 | 21 |
| Osa01LNT0045000.1 | osa-miR1862f | Cleavage | 5.0 | 11.399 | 1 | 20 |
| Osa01LNT0045000.1 | osa-miR1862g | Cleavage | 5.0 | 11.399 | 1 | 20 |
| Osa01LNT0045000.1 | osa-miR5499 | Translation | 4.5 | 18.51 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0045000.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0045000.1 | 1 | sf1.1 | Physiological trait | Sterility | RM212 | RM315 |
| Osa01LNT0045000.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0045000.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0045000.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM543 | RM472 |
| Osa01LNT0045000.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0045000.1 | 1 | sf1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0045000.1 | 1 | ng1 | Morphological trait | Panicle/flower | RG374 | RG394 |
| Osa01LNT0045000.1 | 1 | sf1 | Physiological trait | Source activity | RG374 | RG394 |
| Osa01LNT0045000.1 | 1 | ng1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0045000.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0045000.1 | 1 | nan | Physiological trait | Source activity | RG374 | RG690 |
| Osa01LNT0045000.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)