© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0045100.2
CATAACCAGAAAAACCCATGTCTTACAATTAATAGGTCAACCCATAGTTCATGGAGTATTGTACATTGGAAGAGAAGCACACACAATATTAGAACACACCACCATTTTTTTCCACCGCTTCATTTTCTTTTTCTTACTCTTCACACACAACAATCATCAGGAAAAAAACTGCCTGTAAACAGTTAGAATTGTCTCAAATCAACCCTGACAAATCATACATTTTCACGGAGGGTTCAACCTCGACTCTCGAGAATGCAATCTAAATTAGAAAATACACAAAGGAAGAAAAGCAACCTAACAATAATAAGCTCTGATAATATGACTGAATTATGAAACCGGAACATCCTTCAGTGAGGCAGGATCCACCTTAGGAGGGTCTGAATGACGCCTCCCTCTTTCCATCAGCTTATCTGCATGCTCACCATTTGGTTTGTCTGCGACTGGGAAGGATAAGCGCTTCTTTATTGAAGAATGGACCAGGGGTACTCTCTCAGGAACCTCAAACCTGTCAGTCAATAGACTGCGGTACCGAGACTTCGCCCTTGCAGACTCTGTGGACTGCATGTAGCTGGGGAGAGCTGGTGTGCTTGTTAGGCTCGCATCATCCCGAACAGAGGCACCACCTGTGCTCTGCCTCCTTGGGCGTTCAGAGCGTATGCTTGTGATGCTCCTCAAGTCATCCTCCTTATATAGCCAGCTATCCCGTGGACTTGCTGGTCTGATCTTTCCGGTAACTGAGGGGACCCTTGACGGGGGAGTTGATGGCGATTGCCGACTTGGTGGACGGCTTGACTTGTTTGGTGTTGCAGGTCTCTGGATTGAGATTGCGCGGGGTACATAAGTACGAGAAGCGCTAGTGCTGGGATTCTTTGTTGAATAATGGTCCTTAGGATCCTTATCTGATATCACTCGGCTCTCCCAAGGCCTTGATGTCATCCAGCGTTCCATCCAGCTCCATCCCCAGTTAGGATTCCCTTGATCCGTGAAGGTAGGTGTTATAGTTCGGCCAGAATTCTTCCACTGGTGAGAAAATGCATAGGCAAGAGCTCTTTCCCGCCTTAGCGCAGCTTCTTGTTTCATCATTAGGCTGGTCTCAACCTGCTCCTTGGACTGATGGCTATGATCCCAATCTTCATCAATCTTCATTTTCTCAAGTTCCCTCTGATGCTTTAATTGTAGCTGCCTTTGAAGAGCCTGTTTTTCCTCCTCCATCTTCACCCTTCTAGAGTATATTTGAGTTTGAACTCTGGTCATGGTTTGTGTGCAATGCAAGGTGTGCGCAGTTTGTCGTTTGACGGCGTTTCCATCAACCAGCGACTTCAATCTAACTAGCCCTCTAAGTGCTCGCAGCGCTCTTCTTGCCAGATAACCCCTGAAGGCAGTCTGAATCTTGATAGCGGCAAGCTCATCCTTTGAACTAACAGGCGATTTCGGCACAGCCGTGGTGGCTGTTGTGAGGCGGACCACCTCAGCAGCGGCCTGGGCAGCGACGGCAGCAGCTTCTGCAGCAACAGCAGAGGCAAGTGCAACAGAGTACGCATGCTTGTTCTGTTCACTGTCAGTTTCAACAGCCTTGACATCTTTGATCTCCTCAGGCTGTGGCTGGATAGGGTGTGTTGGCGGTGGCGGTGGCGGCTGTGGAGGCGGTGCTGTAGAGGTAGGCACTGCCACTGTTGAGGTCCAAGGATCAGACTTCTTAGACTTTCCAAATGGCCATTTCCTCCTGGATCTCGACTTGTCCGCCTTCTCGATCTTAGCTTCCCTCCCATCTGGATCGGATGAGCTGAAGACTTTCTTGACAGCACTGAACCAATTTCCTTTCTTACCCATTTTTTTGGTGTTCCTTTATTGTGTCTTCAGCTAAAGCCTGTTTTTTTTTCTTCTCTCCTTTTTTTTTTTTTACTTTCCTCGCCCCGTCGAAAGGCGCCGCCGCTTTGGCTTTTATCGGCAGCACGCAGAATTGATTCGCTCTCGCGGTCGCGGCCACCACCACCCCGGACGACGACGACCCCGCCCTCCTCCTCCTCCTCCTCACCACCACCAGCCGTTACGTGGGCCCCCCCGCGCCCCCCTCTGACCGCGTGGGGACCACCGCGAGCAGCAGCAGCAGCAGCAGCACCGGGCCCCACGACGACGACGAGCCGTTCGTTCCCTCCTCTTCCTCTAGTACGATTCTACGAACTCCTCCTCTCTCTCTCTCTCTCCGTCGCCGCGGTCACCGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0045100.2 | 1 | 35709887 | A | G |
| Osa01LNT0045100.2 | 1 | 35713641 | G | C |
| Osa01LNT0045100.2 | 1 | 35713397 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0045100.2 | osa-miR5830 | Cleavage | 4.0 | 21.147 | 1 | 24 |
| Osa01LNT0045100.2 | osa-miR395b | Translation | 4.5 | 9.833 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR395d | Translation | 4.5 | 9.833 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR395e | Translation | 4.5 | 9.833 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR395g | Translation | 4.5 | 9.833 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR395h | Translation | 4.5 | 9.833 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR395i | Translation | 4.5 | 9.833 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR395j | Translation | 4.5 | 9.833 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR395k | Translation | 4.5 | 9.833 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR395l | Translation | 4.5 | 9.833 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR395s | Translation | 4.5 | 9.833 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR395u | Translation | 4.5 | 5.071 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR395u | Translation | 5.0 | 9.833 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR166h-5p | Translation | 5.0 | 15.339 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR437 | Cleavage | 4.0 | 18.706 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR395m | Translation | 4.5 | 9.833 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR395n | Translation | 4.5 | 9.833 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR395p | Translation | 4.5 | 9.833 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR395q | Translation | 4.5 | 9.833 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR395v | Translation | 5.0 | 9.833 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR395r | Translation | 4.5 | 9.833 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR815a | Translation | 5.0 | 9.772 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR815b | Translation | 5.0 | 9.772 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR815c | Translation | 5.0 | 9.772 | 1 | 21 |
| Osa01LNT0045100.2 | osa-miR1865-3p | Translation | 3.5 | 17.731 | 1 | 24 |
| Osa01LNT0045100.2 | osa-miR2919 | Cleavage | 4.0 | 9.284 | 1 | 19 |
| Osa01LNT0045100.2 | osa-miR2919 | Cleavage | 4.0 | 18.238 | 1 | 19 |
| Osa01LNT0045100.2 | osa-miR2919 | Cleavage | 5.0 | 13.454 | 1 | 19 |
| Osa01LNT0045100.2 | osa-miR2919 | Cleavage | 5.0 | 17.493 | 1 | 19 |
| Osa01LNT0045100.2 | osa-miR2922 | Translation | 5.0 | 15.175 | 1 | 20 |
| Osa01LNT0045100.2 | osa-miR395y | Translation | 4.5 | 9.833 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0045100.2 | 1 | ng1 | Morphological trait | Panicle/flower | RG374 | RG394 |
| Osa01LNT0045100.2 | 1 | sf1 | Physiological trait | Source activity | RG374 | RG394 |
| Osa01LNT0045100.2 | 1 | ng1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0045100.2 | 1 | sf1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0045100.2 | 1 | nan | Physiological trait | Source activity | RG374 | RG690 |
| Osa01LNT0045100.2 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0045100.2 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0045100.2 | 1 | qChll1a | Morphological trait | Culm/leaf | C86 | C813 |
| Osa01LNT0045100.2 | 1 | qH2O21 | Others | Others | C86 | C813 |
| Osa01LNT0045100.2 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0045100.2 | 1 | sf1.1 | Physiological trait | Sterility | RM212 | RM315 |
| Osa01LNT0045100.2 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0045100.2 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0045100.2 | 1 | nan | Resistance or Tolerance | Insect resistance | RM543 | RM472 |
| Osa01LNT0045100.2 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)