© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0045200.1
AGGATTCGAATTTGTAATTTCTTCTTCTAAACAATGAATGTTAAAAATCATAGTATTTATGTAAGATGACAATGTTATACATGCCCATTCGGAGATGAACAAGCAACATAAATTCTTACAGAGTACTAAATGATTTTATTTACACACTATCGCTCATGCCATGTAAAAAGCCAACAGGATGGTAAGATCACCCAAATCCACATATCACATACACTTTTTTCAATGATGGTTATGTAGCCATTAGGAATGAGGCCAAAATAATTTAGAGAAAGTTTTGTGCGACTTATCAGGGCTAAGCTAAAAAGAAAGATAACCTGAAATGGGCAAACAGTAAATCAAGGCCAAACTATACTTAGGAAAATGAATCATTTGGTTTTTTTCGAGAAAATACATACTCAGGGAAATAAATCATTTATAAATAAGAGGGACAGAATCAATTTATAAATAAATCATTTCTTAAAGATGTTCAAAACATCATGCTGCTAGTTGGTGAATTATGATAGTAACATGCCCGTGCTAACGGTATTATGGCATTATTTGTTAATGCAAAACAGTCAAAAGATGATCTATGTTTTGACAATTAAACATATAATGGGATGTATATATGATTCAAACAAAAAGGAAACAGTGATTATGAACATTCCAAAGTGGTTCGTCCAGTGAACAGGCAAAGGATCCCATTCCACCCTAACATGTGAACTATAAAGCTAACATATGCAAGAGGATGAGTAGTATATACCTCAAGAATGAACCACTAACCACTCCTAGTGGGAGGACATGCGTTTTTTCCTTCAATCTGAGGAGAACATGTCAAGCACATGAAACCAAGCAGAAGGTCATGACAGATTGCACTAAACCATGTTAGAGGCCATAGATTAGATTGGATCATGCTAATGCTATGCAGTTCATGGTGCAATCAAATTACAGTTGATTTGAATATGCAGTTGGTAGCAAAAAAAATATTAGACAGGAAAACATGAATTTATGATAAAAAAATGGACCATGTTAACTCTGCTCAATCTAGGATAGAAACTGAATTGATCTTCACTCCTAATAGACCATACAACTCTCTCATTAAAAAGTATATAGATCTAGGGCATAAAAATTCTGCAATTTGATCATCCAACACAAATTCCTGATGCATGAATAAAGGAAATCCAATCATTGAACCTTCAAGGATACCATAACTCTGACTAAATAACGTATTTGCTAATATTTGGCAATGGACCAACGGACCTCAGAAAACTACAATACATGATTTGCAATTGATTCTTTAAGAGAAATTTCAGGGATTGCAAAAGGATCAGATGCATATTTATGATCCATATGGCTATGGAAAATATCTTGATTGTTTTGGAGATTAGCACTACCAGACATCGATAAGTTGAATACAAACGTCAATGATTAACTGGGCTTTTTATTCTTATGCTCCTACAGATGTCGTGGCTGCCCTGTTGCTCATTATTGCCATAAACCAGAGTATCCAAGTGTGATTAGCGGAGGAAAAGAAACAGCTTCCATCTATCCAAGCGGTGCCGCACCTCACCACCTCTATCTATCTATCTCTCTCTCTCTTGATAGGATGGTTTAGTGGTTTAGTGGTTTAGTGTGGTGACTTGCAAGATAATACAAAGTTATACTTAAGTGCTTTTGTGTAGTGATTAAGTGTAAACTTTGTATGCTACAAGATAACAAAAAAGGTATGTGTACTTGTGTACTAATCAACCTTTACATAAATACTGTGACATGAAAGATCTATGACGTGCAGAATATATAGGCCACTATATACCAAAAACCTTATTTCAGAGTTTAGACTTTAGTGGCCGATTCTTCCATGGATCCGGCATGCACAAATAAATCAAGAATGAGTCAGGAGCTGAATGCATACATCCAGTAGGCCAACAAAATACATCTAACTAATCATATAATCTTAAAGGCAAGCAAACTACATCCAGCACAACAGAATTAATGCATACACCTAGCAGCACCAGGCCATCAAGATCTATATCTTGCAAATTTTATACTTACTATGGTTACATGTTCTTCTGAATTAGAGAAATTTCAGGGTGTGATGTAAACATATATACCAATTGCAAAGCGAAAATTTCGAACCGGAAAAGATGACTAATTTAAATGAGACACACACACACCTGAAACACTGATCTGATGTTGAGGAGGCCGGATGCTGGCAGTAATATTTGGAAGTTAAATTCAACTGCAGTATATGAACGTCAGCACATCTACTGTCAGAAAATTAGTTGATTCAACCTGTAACTGTTGACATATAGATTTAGTTTATTAGCATCTAATAAGTATCGAATGTGACTTGACAGAAATGTGATTACATCGGATGCAGAAGATTTATTATAAGATCGGTGCAAGAAGATAAGTGCTGAATGATTAAGAGACCAAATTTCCCCGGACAGAAAAATAAATTACTTTCATTGATATGGAATGAAAAGAAAATAAGAAAAGGTCTGAAAATATAAATTTTGCACTGAAAAATTGAAGTGAATTTGACAAACAGATTTCCAGTCCACTGGTAAACAGATTTTTGTCCCTATACTTACCTAATTGACAATATATAAGATTAGTAATCCAACTCATGTTTGCTATACGTGCACATGCACCATTTACACACACCGACAAAACCAGATCGATTTGTAAGATATCGAAACTAATTTATTGGATGAAATAGGATGGTTTCCTTCAGGATACAGCCCCAATACTTTTGAGTATTTCACCATTTAGTAATATCATAGAATCCAACCTGCTGATTGCAGTTATACTATACTCCATCGTTTTGTGTCGACCTACTATATCTATCCTATAGCTGGCTAATGAGAATTAATTAAGTTTCAGAAGGAGGTGTCAAATTAAAAGCGATCGAAATGATAAGCTGTCTTAATTTGCACTGGGATGCTTGTGTGCGACACAAACGCGTCTCTGCAGGCCATAGATTATGAGTTTATGACAGTACAAATGTACAATTACCGTCAGACTGCCTTTAAAAACAAATTAGCCATACAGCCATACGGGGAGAGATGTCTAAGCATGGTTTCCTCACTTAACTTTACTTAAATCACACAATAGAAGAATTGACTAAGTGGGCAAACCCATATGTTTACTATCAACACAGCACCGACATCTCTTCCTAGTTCCTCCTACTTTTTTATTCCTTGACCACATATGACTCAGTTGGCTATATGTATATAATTACATTCCAGCCGTATAAGCTAGGTTAATGGTTCCTTAGCATGCTTGCAAAACATATAATTCAGTTAGTTATTTGACAATGTTCATAGAGTAAATAGATATGAAAATAAAGCTCCAGATTTACCAGGGACCACACGATCTGGCAGCTTGGCTCCAACGCAAACTAAACCCATACATAAATGGCATGTTCTTAACATCAAGCTTTATTTTCAGCCTCCATCGTTGAGTCGACCTCTCATCTCATGCAGAGCCTTAACATGCCCCGTTGAGAACCTCGTTGCTGCTGCGGCGACTTGGCGCTTAAAGGAGATAGGGTTGGAAGGGAGGGGCATGGTGGGAGGAACTAAGAAACCGAGGTGACGGATTAAGGAGGAAGACGCCGCACGTCTACCGCTGCTCTATCTCCTGGCCGCGGTCCGGGTGGCGACGCGGCGCGATGGGGTCCGAACGGCGACCTGAACGCGGGCAACGGTGGCCAGGGTTTAGGGGGATCGAAGTCAAGGCGGCGTTTGGCGAAGGGCGGAGAGCAAAGGGCGGCGGGCGGCGCGGGATGGGGCCATGGGGGTGCGAGGGCGGCGGTTGGCGATCCCTCCGGAGGGCGAAGGAAAAGGGAAAGGAAACCGAGCGCTGGCGATTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0045200.1 | 1 | 35746515 | T | A |
| Osa01LNT0045200.1 | 1 | 35747831 | A | C |
| Osa01LNT0045200.1 | 1 | 35747951 | T | G |
| Osa01LNT0045200.1 | 1 | 35749000 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0045200.1 | osa-miR5533 | Translation | 4.5 | 19.628 | 1 | 21 |
| Osa01LNT0045200.1 | osa-miR5543 | Translation | 3.0 | 11.445 | 1 | 21 |
| Osa01LNT0045200.1 | osa-miR5822 | Cleavage | 5.0 | 15.978 | 1 | 21 |
| Osa01LNT0045200.1 | osa-miR5822 | Translation | 5.0 | 12.559 | 1 | 21 |
| Osa01LNT0045200.1 | osa-miR6252 | Cleavage | 4.5 | 17.533 | 1 | 23 |
| Osa01LNT0045200.1 | osa-miR6252 | Translation | 4.5 | 7.155 | 1 | 23 |
| Osa01LNT0045200.1 | osa-miR1437b-5p | Translation | 4.0 | 17.784 | 1 | 21 |
| Osa01LNT0045200.1 | osa-miR7693-5p | Cleavage | 5.0 | 22.571 | 1 | 24 |
| Osa01LNT0045200.1 | osa-miR159a.1 | Translation | 4.0 | 18.118 | 1 | 21 |
| Osa01LNT0045200.1 | osa-miR159b | Translation | 4.0 | 18.118 | 1 | 21 |
| Osa01LNT0045200.1 | osa-miR159f | Translation | 3.5 | 18.118 | 1 | 21 |
| Osa01LNT0045200.1 | osa-miR159f | Cleavage | 5.0 | 22.636 | 1 | 21 |
| Osa01LNT0045200.1 | osa-miR171f-5p | Cleavage | 3.5 | 15.95 | 1 | 21 |
| Osa01LNT0045200.1 | osa-miR171i-3p | Translation | 4.0 | 13.906 | 1 | 21 |
| Osa01LNT0045200.1 | osa-miR810b.2 | Translation | 5.0 | 17.226 | 1 | 21 |
| Osa01LNT0045200.1 | osa-miR810b.2 | Translation | 5.0 | 12.312 | 1 | 21 |
| Osa01LNT0045200.1 | osa-miR1438 | Cleavage | 4.5 | 12.201 | 1 | 22 |
| Osa01LNT0045200.1 | osa-miR1850.3 | Cleavage | 4.5 | 11.904 | 1 | 22 |
| Osa01LNT0045200.1 | osa-miR1850.3 | Cleavage | 4.5 | 9.366 | 1 | 22 |
| Osa01LNT0045200.1 | osa-miR1875 | Cleavage | 4.5 | 11.952 | 1 | 24 |
| Osa01LNT0045200.1 | osa-miR2055 | Translation | 4.5 | 14.974 | 1 | 21 |
| Osa01LNT0045200.1 | osa-miR2101-5p | Translation | 5.0 | 14.742 | 1 | 22 |
| Osa01LNT0045200.1 | osa-miR2118i | Translation | 4.5 | 18.603 | 1 | 22 |
| Osa01LNT0045200.1 | osa-miR2864.2 | Cleavage | 4.5 | 18.765 | 1 | 21 |
| Osa01LNT0045200.1 | osa-miR2874 | Translation | 3.5 | 8.443 | 1 | 24 |
| Osa01LNT0045200.1 | osa-miR2876-3p | Cleavage | 4.5 | 8.543 | 1 | 21 |
| Osa01LNT0045200.1 | osa-miR2921 | Translation | 3.5 | 23.78 | 1 | 24 |
| Osa01LNT0045200.1 | osa-miR1862f | Cleavage | 4.5 | 12.901 | 1 | 20 |
| Osa01LNT0045200.1 | osa-miR1862g | Cleavage | 4.5 | 12.901 | 1 | 20 |
| Osa01LNT0045200.1 | osa-miR5514 | Cleavage | 5.0 | 22.278 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0045200.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0045200.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0045200.1 | 1 | qChll1a | Morphological trait | Culm/leaf | C86 | C813 |
| Osa01LNT0045200.1 | 1 | qH2O21 | Others | Others | C86 | C813 |
| Osa01LNT0045200.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0045200.1 | 1 | sf1.1 | Physiological trait | Sterility | RM212 | RM315 |
| Osa01LNT0045200.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0045200.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM543 | RM472 |
| Osa01LNT0045200.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0045200.1 | 1 | ng1 | Morphological trait | Panicle/flower | RG374 | RG394 |
| Osa01LNT0045200.1 | 1 | sf1 | Physiological trait | Source activity | RG374 | RG394 |
| Osa01LNT0045200.1 | 1 | nan | Physiological trait | Source activity | RG374 | RG690 |
| Osa01LNT0045200.1 | 1 | ng1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0045200.1 | 1 | sf1 | Morphological trait | Seed | RG374 | RG394 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)