© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0045700.1
ATATGACGTTTGTTACGAAAATTGTGATGAGTGGCAGTATTTCAAAGTTTCTCAACGTTTACAGCCCAAGCCACACAAATACAACCAGAGCTTTAGAATAGGTGACAAACATGTCCCAGTGCTATTCAGCCTTCCTGGGAGACGAAACCGCGACCACCACCAGGCACACTATGGGAAGTACAGAGGGGGAGAAGTGAATTGCTAGTGTCAACTGACATTTGGAAATCGACAGCCAAATCATGCACATGTGACGTGGTATGGTTAACTTTCCCCAGTACTGCCGGTTTCTTCAGAGCATTTCTTGTGATTTCCTTACAAGGCGCCTAACCTTTTTCTTGAAGTCATCCCTCTTCTCTCTCCATTCCTTAGCTGCTTCAATATTTGCTGGTGATTCATCATTTGGACCAGAAAGCATCGAAATGATGCTCAGAACTATGCTCTCAACCGTATGCACTGGTGTCCAACGCTCACTCGCAAGCTCATAACCATTGGGATCATCACCAGGCGGATGAAGAATAGAAATGCATACACGTCCATCCGGATAAACTGGCAATTGACCAATATTATGCTGTGTTAAAATTATGGATCATGGAGTTACAGAAACATGAAGTTACAATGAGGAAAGCTGACCATTTGGATGCCACATTTCTGAGGTAAATCTGACAGTTGGAGGACTGTTAGGATAATTCTGTGGAAAGCTCATTATTGCATTAAAGTAACCTCCATCACTGAAAATAAATGTCATTGTCACAAGGCAGTTTGAGAAAGAACAGTTTAGATCATCAAGCTAACAGCCCAAACACCAAAGATGAATAGATGACAAATCAGCAAGCACATGAAAAGGGCTCTATATCTGAAATAAGGACTGTTATCAGTTACCACTTACTAGAAGTTTAAACCATAGTAGCTAACTCATTTTGAGCTCATATCAAATGTTTACACATTTGAGATTCTGGACCATGGAACAAGCAAACCAGTAAATTCGTTTAATGTGTAAAGAATCCTTCTGTCCAAGCCAAGAAAACACCAAAGAGCGCATTATTTGAAAGTAGAAAATATATTGAACGCATATGCAAGCTCCCTGACAAGAGTGCACGATTCCATTTTAAGCTTACCGAGACTATTCTTTAGTTTTCTTTCAAATAACTAGCTGGGTGGCCCGCGCAATTGCGCGGCTAGCATCCGTACAAAACTATCTATCTTTTACATATGATTTTACTTAAAATTTGTTAAACAACTATCTCGTTGTCTTGGGACATTGGACCGAACCTTATCATCTCGGTGTTTCTACTTTTATAGTTTATAAGAGTCACGTCGGTCGCTACCACTTACTCCTTTGTCACATCTCCGTTATTTGCTTGCTCGATCTACTATTGCTTCTATTCATTCTCCTTAGAACCTTAAAAATTATATCTTGTAGTTTTTAGAGTTTATTGGCTTGTTTGGTTTCATTTTTATAATATTTAGAAGTTCCGTCAAATGCTGCCAATGTACTTCTCTACGGCCAGTCCACTATCCTCTCTTTATTAACATTGGGATTTTAAAAATCGAACATAATTATCTAGAAAGTCCCGTCAAACGCTACCATTGTACTCCTCTACGGCCCGTCCACTGCCTCATCTCTTTATTAATATTGGGATTTTAAAATTCGAACATAATTATCTAAGAAGTCCCGCCAAACCTTTAGCGGCTTTGCCAATGTACTCCTCTACGGCTCGTCCACTGCTTCCCCTCTTTGTTATTATTGATATTTTAAAATTTAAACATGATTATCATTGGAGTTTATTTGTTAATTTCTAGAAATCCTGCCAAACCATCAACGGCTTTGCCACTGTACTCTTCTATGGCTCGCCCGCTGCCTCCCCTCAAACGTTGTGACAGTGCTACTTAACAACATGTCTGTGTTCCTCCTCTTAATCTTAATTGGGATTCTATTTGGAGTTCTGTTTATAATTTTTAGATGTACCATCAACCGTCATCTACTACTTTACAGGCATGTTGTTTCTCCTTTTTATTATCATTTGTCATCATTGTATTCTAGATGGACTTTTTTTTTTGAAAATTCTATATTCTTTATTCTGGCATTTTATTTATAAATTGTATTCCTGCATGAACTCTTCTATAATTTTTAGAAGTCCTGTTAAACACCGCCACTGTACTCCTTTATGGGGTGCCCACTGCCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0045700.1 | 1 | 36017429 | C | A |
| Osa01LNT0045700.1 | 1 | 36019789 | T | C |
| Osa01LNT0045700.1 | 1 | 36019925 | A | G |
| Osa01LNT0045700.1 | 1 | 36020091 | A | G |
| Osa01LNT0045700.1 | 1 | 36020253 | A | G |
| Osa01LNT0045700.1 | 1 | 36020759 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0045700.1 | osa-miR5794 | Cleavage | 5.0 | 12.352 | 1 | 21 |
| Osa01LNT0045700.1 | osa-miR1440b | Translation | 5.0 | 20.141 | 1 | 21 |
| Osa01LNT0045700.1 | osa-miR5512b | Cleavage | 4.5 | 9.473 | 1 | 21 |
| Osa01LNT0045700.1 | osa-miR319a-3p.2-3p | Cleavage | 5.0 | 12.514 | 1 | 20 |
| Osa01LNT0045700.1 | osa-miR319b | Cleavage | 5.0 | 12.514 | 1 | 20 |
| Osa01LNT0045700.1 | osa-miR171g | Translation | 5.0 | 18.619 | 1 | 21 |
| Osa01LNT0045700.1 | osa-miR408-5p | Cleavage | 4.0 | 12.603 | 1 | 21 |
| Osa01LNT0045700.1 | osa-miR395v | Cleavage | 5.0 | 9.549 | 1 | 21 |
| Osa01LNT0045700.1 | osa-miR817 | Cleavage | 4.5 | 14.142 | 1 | 21 |
| Osa01LNT0045700.1 | osa-miR1426 | Cleavage | 3.5 | 22.683 | 1 | 21 |
| Osa01LNT0045700.1 | osa-miR1426 | Cleavage | 4.5 | 10.881 | 1 | 21 |
| Osa01LNT0045700.1 | osa-miR1426 | Cleavage | 5.0 | 11.338 | 1 | 21 |
| Osa01LNT0045700.1 | osa-miR2094-3p | Cleavage | 3.5 | 19.536 | 1 | 22 |
| Osa01LNT0045700.1 | osa-miR2101-5p | Translation | 4.0 | 9.429 | 1 | 22 |
| Osa01LNT0045700.1 | osa-miR2878-3p | Translation | 4.5 | 21.177 | 1 | 24 |
| Osa01LNT0045700.1 | osa-miR5512a | Cleavage | 4.5 | 9.473 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0045700.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0045700.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0045700.1 | 1 | qChll1a | Morphological trait | Culm/leaf | C86 | C813 |
| Osa01LNT0045700.1 | 1 | qH2O21 | Others | Others | C86 | C813 |
| Osa01LNT0045700.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0045700.1 | 1 | sf1.1 | Physiological trait | Sterility | RM212 | RM315 |
| Osa01LNT0045700.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0045700.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM543 | RM472 |
| Osa01LNT0045700.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0045700.1 | 1 | ng1 | Morphological trait | Panicle/flower | RG374 | RG394 |
| Osa01LNT0045700.1 | 1 | sf1 | Physiological trait | Source activity | RG374 | RG394 |
| Osa01LNT0045700.1 | 1 | sf1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0045700.1 | 1 | ng1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0045700.1 | 1 | nan | Physiological trait | Source activity | RG374 | RG690 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)