© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0045800.1
AGAATTTCCAACTTTTAGCTGTTTGCCTGTTTCTGACTCAAACTGAAATTGGCAAATTGTACAAATGAAAGAAGAAGGAAAACCTCCCTCCCTTGATACAATAATCAAAAGAATAGTTAGACAAAGAGCTAGCTTTCAGATGAAAGGATCAATAAATTATATCAGAATAAGCATTGTTCCTCTTCTCAAAATTTGTATGACAAATTTCTTCCTAGCTGAGAAATGTACAAGGGAACTACTATTACATCAAGCGGACTGGCACTACATTGTCAGGGTATTAGACCTAGAAACGGTTAGACACATCTATTGAGACTCAGATCGGTGTATTGTTAGCCCCAGGATTAGCTTAGCTAATATGAATCTAATATATCCGCAAAATCCACCTGGGGAGTGTAATAGATGAGCAATGCTGCAGTAGGGTGCTTGGAGACCGGACAGACATCACACCACCAGACGGCAAGCAAAGAATGAGCACATGCTATGGTACCAAAAAGAATCAAGGTCAGTCAATCAAGTCAAGACTAGTAGATGCTATCTAGCCTGGATGGATTTAGAGTGTTCTGATTTGTTTGAGCGGCACATGCAGTCGGGGCATGGAAAGGTGTATATAGATTCATTTGCTCTTTTCATTTCAATACCCTTGGCATCGCTGTGTGTTCTCATATTCACCAACTGACGTTTCAGTGACTTCCATCCGATACGTGGACTATCGAAGAGTATGGCTAATCTTCTTTTATCAGGCTTAATTGTCTTCGAATGACCACCATAAATGTATCTCCTATGACCAAGAAGGAAATGAGGAAAATTTCCACCTTGGGTAGTCACGAAAACTTCACTATGAACACATACTGTGTAATCGATAGCTGCCATCCTTGAAGAGAAATTCTTGAATGGAGCAAGTTCTTCATCTGATGCCAATGTTTCTTTTGTCTGCAAGAGAGGAAACATTTCAAGGAGAGGTGCCATGTTCTTCTCTGATTTATATATCCTCCCAGAAGCCAAATAGATCGCGGTGTTATTGCTGAAACCCATCCCGCGAAGCATTAACCCAACCTCCAAAGGTGTAAGTGGACATTTCCCATTCATCCTTATTGCTCCAGGCCTTATTACACGTCCTGGCCTAGTAAACTTTCCTCTCCAACCCCTCTCCCTGGCTGCATCCAGTTCCTTCTTCTCCTTTTCACCCCCGTCGAAGACACAACAAGAGAATGCAACCATATCCTCTTCAAAACGGAGATGCACCGCTACATATTTCCCATTGTTTTCGGCACTTTTTTCTCTCATTCGAGATACTAAAATGTCAGATAAAGTTGTGATCGGCTTAGAAAACTTTAAGGCTTCAAAATTAGCCAGACATCTCAACCGTTGAACAGCTGATGGAGCATCAAAGGACAGTCGGTTTGCAAAAGGTGATATCCTTATAAGCCTTTCTTCGATCAACTTAGGAAGAACAGCTTCTTTGTAGTATCGGATAGAAGACCAAGCCTTTATCTTGAAATTAAACACATTACTCAAATTGTGACCAAACCTCTCCATAATAAACTCAGGCACCTTGTCAACTACTCGGACATCATTTTTCAATCGTTGGACGAAGTGTTCCTCATCATAAATATCACTAAATTTGCTAGGATCCCTCCAAATGCTGTGATAGTGGAAGTTTGGGATCACAAGAGTTGCATTTAGAAAACCAGCAACCGCAACAGCATTGCATATCGATGCCCTTTGCTGATTCAAACCACCATTCGCCTCCACGTATATGTAGCCATTTAATTCAGGCAAATCATATGTAATATTGTTTATGCAAGGTCGCCAAATGCCACCCTTGTAAGCATGTCTCCATACAGTTGCTAGCGCGTCAGTGGCGTTGTCGGCGTCCATGTCGGCGCGCAGGCGGGCGTAGAGCTGCGGGCTGCGGTACAGCGAACCAGGCGCCGGGCGCGAGATGATGCGGGGCACGCTGTCGAGAGAGATGGAGCCCATGTAGAGCAGCATCGCCGCGACGTACAGCAGCGGAGCGAAGAGGAAGACCGCCTGCCGCCGCAGCAGCGCGGCGAGCACCACCCTCGCCGCCCTCCGCACGGCGCCTCCGCCCCGCACAGCTCCGGCCGCGCCTGCCCCCGCCCCCGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0045800.1 | 1 | 36105491 | A | C |
| Osa01LNT0045800.1 | 1 | 36107132 | A | G |
| Osa01LNT0045800.1 | 1 | 36107602 | T | C |
| Osa01LNT0045800.1 | 1 | 36108212 | A | G |
| Osa01LNT0045800.1 | 1 | 36108383 | A | G |
| Osa01LNT0045800.1 | 1 | 36108564 | T | C |
| Osa01LNT0045800.1 | 1 | 36109855 | A | C |
| Osa01LNT0045800.1 | 1 | 36110188 | A | G |
| Osa01LNT0045800.1 | 1 | 36106222 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0045800.1 | osa-miR5143b | Translation | 5.0 | 19.416 | 1 | 24 |
| Osa01LNT0045800.1 | osa-miR1440b | Translation | 4.0 | 14.983 | 1 | 21 |
| Osa01LNT0045800.1 | osa-miR1437b-5p | Translation | 3.5 | 14.314 | 1 | 21 |
| Osa01LNT0045800.1 | osa-miR159c | Cleavage | 5.0 | 14.228 | 1 | 21 |
| Osa01LNT0045800.1 | osa-miR159d | Cleavage | 5.0 | 14.228 | 1 | 21 |
| Osa01LNT0045800.1 | osa-miR159e | Cleavage | 5.0 | 14.228 | 1 | 21 |
| Osa01LNT0045800.1 | osa-miR443 | Translation | 4.5 | 21.432 | 1 | 22 |
| Osa01LNT0045800.1 | osa-miR812a | Cleavage | 4.5 | 16.324 | 1 | 22 |
| Osa01LNT0045800.1 | osa-miR812b | Cleavage | 4.5 | 16.324 | 1 | 22 |
| Osa01LNT0045800.1 | osa-miR812c | Cleavage | 4.5 | 16.324 | 1 | 22 |
| Osa01LNT0045800.1 | osa-miR812d | Cleavage | 4.5 | 16.324 | 1 | 22 |
| Osa01LNT0045800.1 | osa-miR812e | Cleavage | 4.5 | 16.324 | 1 | 22 |
| Osa01LNT0045800.1 | osa-miR1846d-3p | Translation | 5.0 | 17.806 | 1 | 20 |
| Osa01LNT0045800.1 | osa-miR1860-3p | Cleavage | 3.0 | 13.283 | 1 | 22 |
| Osa01LNT0045800.1 | osa-miR1863a | Cleavage | 5.0 | 17.074 | 1 | 24 |
| Osa01LNT0045800.1 | osa-miR1879 | Cleavage | 3.5 | 10.744 | 1 | 24 |
| Osa01LNT0045800.1 | osa-miR2867-3p | Cleavage | 3.0 | 12.776 | 1 | 20 |
| Osa01LNT0045800.1 | osa-miR812k | Translation | 4.5 | 16.324 | 1 | 24 |
| Osa01LNT0045800.1 | osa-miR812l | Translation | 4.5 | 16.324 | 1 | 24 |
| Osa01LNT0045800.1 | osa-miR812m | Translation | 4.5 | 16.324 | 1 | 24 |
| Osa01LNT0045800.1 | osa-miR5143a | Translation | 5.0 | 19.416 | 1 | 24 |
| Osa01LNT0045800.1 | osa-miR5338 | Cleavage | 5.0 | 14.38 | 1 | 21 |
| Osa01LNT0045800.1 | osa-miR5506 | Cleavage | 4.5 | 15.243 | 1 | 21 |
| Osa01LNT0045800.1 | osa-miR5521 | Cleavage | 4.5 | 9.825 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0045800.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0045800.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0045800.1 | 1 | qChll1a | Morphological trait | Culm/leaf | C86 | C813 |
| Osa01LNT0045800.1 | 1 | qH2O21 | Others | Others | C86 | C813 |
| Osa01LNT0045800.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0045800.1 | 1 | sf1.1 | Physiological trait | Sterility | RM212 | RM315 |
| Osa01LNT0045800.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0045800.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM543 | RM472 |
| Osa01LNT0045800.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0045800.1 | 1 | ng1 | Morphological trait | Panicle/flower | RG374 | RG394 |
| Osa01LNT0045800.1 | 1 | sf1 | Physiological trait | Source activity | RG374 | RG394 |
| Osa01LNT0045800.1 | 1 | nan | Physiological trait | Source activity | RG374 | RG690 |
| Osa01LNT0045800.1 | 1 | ng1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0045800.1 | 1 | sf1 | Morphological trait | Seed | RG374 | RG394 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)