© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0045900.1
CTATTATATGAGAGAAAATATAATGATGCTAGCCGTATAATCTGCGCGGGCCACCATGCTAGTTAACATAACAGTAGAAAATGCATCCAACTATACAGTTATCCCCAAAAGTCCGCGTTTGAACCTGAACATAGCAAAGGTCCTACTTAACTCAAATGACCAGATCTGTTCCTTCACCTGATTGTCTCGGACTCAAAATGGATGTACAAGTTAGACTACTGGTACCTGTTAAAAGATTCAAAATGTGACCATACCCCTGAACTGTACTCGTTTGGTCCAAGCAATATGGACTTCGTAGTTGTAAACTGAAGAAGATGGTCTCGAAGTGGAGATCGTTGCCTCAGGTGCATAGGTAACAAGTCACCTCTTGCATTTACATCAGAATCAATTTCTTCATACCTTCACTATAGAGGAAACGACAGGTGCAATTCTGCTCCTTGGCAAGACCAAATAGCAAAGCTATGTTTCCTAGGTGCACAAAGTTGCTGCAGTAGTACTGTAGTATTGTCCAAGGTTCTAAGTTCAGATCGTGAGGCAGTTTGCATAAACAAGGGATTGCATTTTTACTCATCTTAAACTTCTGTAATCTCTGTGACTGATAAGATGTCATCACGTGGATGGGCTGCTTCCACAACGACACTAACTTCATCTCCCACTTTCCCAGTTGAAACCACGGCTGTAGCTTGGATCCCAACCTCTATAACAAGCAAAGTTGCCAAACGATCCTTAATAAACTTAAGAATCAGGGCTTTATACTTCTTTCCCTTTGGTTGTCTTCTCAAGTATTCCAACAACCAGTAACGTAAGTTGTTGCTATGGAGTCTCCTGGCAACTTTAACATGCATGCTTGCAATAAAGGTCATTCCTTCTAGGTCACCAGCTGAATAGGGTGGAGATTCACCTCTAAGAAAAGCCTTTATCTGATAATGAGCTAGCAGATCAACATATCTTCGAATAGGGGAGGTGAACTGTACATAACCAGGAATACCGAGGACACCATGTGGTACAGGTTTTTGGAAATCCATTTCTGCAGCACGGAGCACACTGATGTTGGCAAAACTCCTGGCAGGCCCTTCAGGGAGATGAGTAAATGCTGACACAGCTGTGTTAGACTGGGGATGCCCTCTGTATGGCAAAGCAATATTGTTGTCAGAACCAAAAGCAGCCACGGCCTCCCCACAGAGTATCATCATCTCAGATACAAGCTGCATTGCTGGGTTGGATTGGTCTTCAACATATAGATTAATGTTTGGTTCAGGATCATCAGGATTTGCCACCTTGATACGTGGTTCTATCATAGCAGTATCAATCGAACCCTGACTACGACGCCACTGTGCACGAAGGGAAGCAGCTTCTTGAAGAATTCTCAGTTCTTCCTCTTCTTCCAGGTTCATATACAGTAGTTCAGTTGCACTCTCATATGTTAACATGTAGGTAGGTTTTATGATTGAATTCTCTATACTATATTCTGCAATACTTCCATCTGGCTGCAAAATCACAGATACAGTAACAGATTTACAACCCCTGCCTTGTTGCAGGCTCATAGCATTCATAGCAAGCCTCTCTGGGAACATTGGAAAGGTAGCAGTTGGTAAAAAGATCGAGGTTCCTCTGTGCATTGCTTCCCTGTCAATGATGCTCCGGGGTTGAACCAAGCTTGTTGGGTCAGCAACATGTATCCAGACCTTTATCCTACCATCAGGTAATCTAGCAGCACTTAGTGCATCATCAAGCTCATCAGCTTCATCCACATCAATAGCATACACTTTCAAAGTTGAGAGATCCTTCCTGATATCCTTGTCTGAGTCAGGACAGTCTACCAGAAGTTCCTCTGCAGCTGACAAAACTTCCTCAGTGTACCTGATGCGAACATCATACCTGTAAAGATCAAGATTGACATGCACAGGGAAGTATCCAATATTTATAAGGATCTTTAGAGCAGCTGATGAAGTCTTTGAAAAGCCCATAGCCTTGAGAATGTTTCCTGCCGTTCTCCTTTGTTCATCATCACATGCATCAACTGCATATGCCTGAAGTGACTCAATTTTTCGCTTAACTTTCTCCTCCATCAACCATGAATCTTTTGAAGGTTTAGCATCTAGAGGCAATGCTTTGGCAGACTTGATTAACTGGACAAATTCTTCCATCTCCTTCTCAGCTGCCTCTTTAGCAAGTTTCCGTCGTAAGAGTTCCTCCACCTGAGCAGGTGGGCGAGGTTGGTACACAGAAGAATCCCGGCTTTCGACCTTGACAAAATAGACTATGTCCCTTGATAACAAGAAGTGTGCACAGTAGCTTTCCAGAGACTCCTTGCTACCATAAACTATCTCTGCGAACTCCTCTACTGTTACTGATTTATCATTCTCAGAAAGCTCCATCCAAGCACACTCCAAAACAGTAGGGTCCAAAAGATCTTGTGCTTTCTTGATAAATTCATCTATTCTTGAATGATTGTAATTGATGATACCAGGTATAACATATGTAACCTGCTGGGGTTTTATAGAAGACAATATACCATTCTGGTCAGTCACCTTCCAGTTTTTCTTTCCATCGGGCCTTTCTACAACAGCAAGCAAAAATCTCTCAGAATCTTTCTGAAATTCAAGAAGCAGGCCTTTCTGCAATGTTCTCTTATCTATCTTATTGTCAGACAGTTCCTTTGTCCCCTGCAATCCTATCTTTGCCGAAACCCGACCACGCCTCTGTGATCGGAGCTCCTCCAGGACGGAGTCGACGAGGCCATGGACCTGGCGTCCCCGGCATCCGCCGTACAGGGAGAAGTGCCAGCCGGCGCGAGCGGAGTCCGGGCGGACGGCGCGGCCGAGGGGACGGAGGCGGAAGAAGGCGAGCGTCGCCGCCGCCGCCGTGGAGCAGCCACCCGCCGCCCGCACCGCCATGGGCGACGGCCTCATCGAACCCGCCGCCACGAAGCTGCCGCCGGGGAGGAGAGGGTTTTTGGCGATAAGAGCCTCCCGCGAGTGGAAGGCGAGGATTCAACGGTGCATCGAGAGGTTAGCAAGAGGGACAAAAATC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0045900.1 | 1 | 36142522 | A | C |
| Osa01LNT0045900.1 | 1 | 36143528 | T | C |
| Osa01LNT0045900.1 | 1 | 36144030 | C | T |
| Osa01LNT0045900.1 | 1 | 36144466 | T | C |
| Osa01LNT0045900.1 | 1 | 36144530 | G | T |
| Osa01LNT0045900.1 | 1 | 36144845 | A | G |
| Osa01LNT0045900.1 | 1 | 36145104 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0045900.1 | osa-miR5543 | Cleavage | 5.0 | 17.09 | 1 | 21 |
| Osa01LNT0045900.1 | osa-miR5794 | Translation | 5.0 | 16.717 | 1 | 21 |
| Osa01LNT0045900.1 | osa-miR5795 | Cleavage | 5.0 | 12.265 | 1 | 22 |
| Osa01LNT0045900.1 | osa-miR168b | Translation | 3.5 | 19.785 | 1 | 21 |
| Osa01LNT0045900.1 | osa-miR172a | Cleavage | 4.0 | 17.559 | 1 | 21 |
| Osa01LNT0045900.1 | osa-miR172a | Cleavage | 4.5 | 19.355 | 1 | 21 |
| Osa01LNT0045900.1 | osa-miR172b | Cleavage | 4.0 | 17.559 | 1 | 21 |
| Osa01LNT0045900.1 | osa-miR172b | Cleavage | 5.0 | 19.355 | 1 | 21 |
| Osa01LNT0045900.1 | osa-miR172b | Translation | 5.0 | 19.432 | 1 | 21 |
| Osa01LNT0045900.1 | osa-miR172c | Cleavage | 3.5 | 17.559 | 1 | 21 |
| Osa01LNT0045900.1 | osa-miR166i-5p | Translation | 4.5 | 17.171 | 1 | 21 |
| Osa01LNT0045900.1 | osa-miR172d-3p | Cleavage | 4.0 | 17.559 | 1 | 21 |
| Osa01LNT0045900.1 | osa-miR172d-3p | Cleavage | 4.5 | 19.355 | 1 | 21 |
| Osa01LNT0045900.1 | osa-miR426 | Translation | 4.5 | 17.428 | 1 | 21 |
| Osa01LNT0045900.1 | osa-miR1846a-5p | Cleavage | 4.5 | 23.771 | 1 | 21 |
| Osa01LNT0045900.1 | osa-miR1846b-5p | Cleavage | 4.5 | 23.771 | 1 | 21 |
| Osa01LNT0045900.1 | osa-miR1846c-5p | Cleavage | 4.5 | 23.771 | 1 | 21 |
| Osa01LNT0045900.1 | osa-miR2101-5p | Cleavage | 5.0 | 14.755 | 1 | 22 |
| Osa01LNT0045900.1 | osa-miR2927 | Translation | 4.5 | 15.217 | 1 | 23 |
| Osa01LNT0045900.1 | osa-miR5077 | Cleavage | 4.0 | 16.784 | 1 | 19 |
| Osa01LNT0045900.1 | osa-miR5338 | Cleavage | 4.5 | 14.982 | 1 | 21 |
| Osa01LNT0045900.1 | osa-miR5339 | Translation | 4.5 | 17.266 | 1 | 21 |
| Osa01LNT0045900.1 | osa-miR5510 | Cleavage | 5.0 | 18.452 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0045900.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0045900.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0045900.1 | 1 | qChll1a | Morphological trait | Culm/leaf | C86 | C813 |
| Osa01LNT0045900.1 | 1 | qH2O21 | Others | Others | C86 | C813 |
| Osa01LNT0045900.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0045900.1 | 1 | sf1.1 | Physiological trait | Sterility | RM212 | RM315 |
| Osa01LNT0045900.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0045900.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM543 | RM472 |
| Osa01LNT0045900.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0045900.1 | 1 | ng1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0045900.1 | 1 | sf1 | Physiological trait | Source activity | RG374 | RG394 |
| Osa01LNT0045900.1 | 1 | ng1 | Morphological trait | Panicle/flower | RG374 | RG394 |
| Osa01LNT0045900.1 | 1 | nan | Physiological trait | Source activity | RG374 | RG690 |
| Osa01LNT0045900.1 | 1 | sf1 | Morphological trait | Seed | RG374 | RG394 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)