© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0046100.2
CCGGCACAAACATAAGAAGACTTTGGGAAACAGTGTGCAGCGAATAGATATAGCACCAATTATAAGAGTATAAGTTCTGGCGATATTTGATTAGAACGTGCATATCGTACAGACACCACATACTATTTATACGAATTCATTTATCGTTCTGCTAGCCACTAGGGCTCGCAAGCCTGTAAGACGTAGAAGTAATGTCATTTGGTCTAATGGCTTGCACAAAAGAACACATCCCCTATTTATATTCCCACTGCAAAATACATTGGGCAAAATATGTGAGCATTAGTCTTGCTTGATCAGGGACAGGAGTATACGCCTTGGCATGCCAGGTGCAAAAGACCGCTTTGGTGGGGTGATATTATATGGAGCCCTCAAGTCATTTTGGGGGCTGCGGGGGCAGTTTGTCTACGAACAGCGCACGCACAACTGATGCTTTCTGACAATCATGTTCACGAGGAGATGAACCTTCCTGAGCAAGATCCTCATCAATTACAGAAGATTTATGTTTTTTGTCTGGTTGTGCCATAGCCAGGACCTCTGAAGTAGGCGGTGTTGTCCCATGCTGATCATCACGGCTATCAGTTGTGGCCTTTGGATCTGGAAGCACCAGTGGTGTAGAAGGTGTCATAGATTGGAGAGAAGAGCCAATTATCGTGTGCGGTTCAATTGCATCAGCTGGTGATGAGCCATGTTGAGAAGATGCCACAGAAGCATCATGGCTGGGCAGAGTACTTGTGTGGGCTGCATCTAGTGAGGCTAGCATAAGGGAATCCACTTGGTAAGATATCCGATTTCTTTGCAATGAGCCACGTGACACACTAGTTCTAATGACATATTGTTTTCCAAAAACTGCTTTGATTTCTGATGGAACTATATCTCGTGCTCCTTGGACAGATGCAACCAGGTTAAGAAAAGGGATGCCAATCAACTGGTAGCCAATTTCTCCAAAGAAGGTAAACTCAGCTGTTTTGGCGTCATGGTTCGTCTAATGGGTCGACACCTATGATAGCCACTCTGTACCTTGTTTCAATTGCATTAGTGATGCACCTCGAGCATTTATATGTGTTCCCTTCTCTACCTGCTCCTCTCTTACTGGTGTTGCATGCTATGTACCACCAGGCTTCAGCAGGGACTAAATCCTTGATGGCTATCTTGACAATATAGCTGTTGCCCAAGGCTTCGTGGGGATTAAGGTCACAGATATCAAAAACTTTTACATGCACAGCTTCTTTCTGACCAAAGTTCGGCTCTATTGCCCTTACCACCTGTGGGTTACCATGGAGGCTGCTTATGAGAGAAATTGTTTCCTAGATTGGTGCATTGGGATACCACCTACAAACAGTGCTACCTTGTAGGGCTAGCTGGTCGTCTCGGAATTTAACAGTTAATCCAACAAACAATATAACAACAGGTCCATGGTCTGGTTGCTGCTGTAAGTTTTCAGCGTGGAACTGTGTAGCATGGGCACCCCACAATGCAACGACAGCAGTTTCGCTTCCATTGGTTATGTGGACATTAAGCACCGCTTTCATAACACCTCCACAAGAAACAGTTTGCACTGGTCCAATGGCTGTCATTATACCTATAGCATCTGAAAGAATATCTTTCCTGTAAGCACGACCTCTGAGTTCATCAAAAGAAAGAACCTTGTAAGCATGAGATGGGAATGTGGATGGTGCCTCAGTGTCTTCTCTAACGGTTGTGTGGGCAGTGAATTTTGCCATGACCATCCGATCAATAGGCCTGTACTGGGGGCGCGCCTCAGCAACTTCGAAGTACTTGATGTAATACACAGCATCCTCCTTCAGCAAAGGCTTGAATTGAGAAACATGACGTCCTGGGATCTGCTCATCAAGCAGGACTAAATCAAGTCGCAGAATCTTGTCAGGTTCATTTGCTGTAGTGAACTGCGAGAAGCGCGTGACCCGCACTCGGACTTGCCAATGGTGTGATTCCTGTGTCACATTCCTTAGCATAGTGTAATCCATCTTTAAGAATTTGCATGTGCTCCTTTGGTATGGAATATGTGAATCTCATCGACAGTGAACGCGGCACATGTTCTTGTCGCAAAATAAGACGCATTTTCCTAGCGGCCTGTCTTTTTTCCCGGTTCACTCGAGCAACACGTGCTGGCACTATTGGGCAAAAATGATCTCTGTTGGGTCGAGAAGACTGAATGTGGCCAGCTCCACAACTCCCTATAGTGCATGATGAACTACCCGTGAGCATTGAGAACCCAGTGGCACCGTGGGATGATGACGGCTCATCTATGGCACATGACACACCACCCGTGAGCTCTAAGTGCTTATTGGCAGCAGATGATATGGAGGACCCATCATGTGGACGCTTCCGCGGGCAGATGCGAACGAATCTGGATGGCTCCATGTCATTTCTTAGCGAGCATTAGCTGACGAAGGCAAAGATGCCCCCCTCCCTCCCCCCAAAAGAAGATGCGATGTGTGGGAGAGACGCCAATTGGAGCCCGCAACCTTAGCGAGAAGTAGCTGAGGGAGGCAAAGATGCCCCCTCCCTCCCCCCAAAGCAAGACGTGATGTGGGAGAGACACCAATCCAAGAGCGCAGCCTCCCCTGGTCCTCATAGGGCTCTCCGCGTAGTGGAGCAGCAGCCGTAGCCAGCCCCGTCGTCGTCGTACGCCCATGGCAGAGCACTATCGTTGCTCCGTCGCTGATGGTCAGATAGGGGATGGAGAAGGGGCACGCGTCGAGAGGATAGCGGCGACCAACGGATGATCCAGCGCACAGGAAAACCAGGACGGAGCAAGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0046100.2 | 1 | 36326489 | A | G |
| Osa01LNT0046100.2 | 1 | 36327084 | G | C |
| Osa01LNT0046100.2 | 1 | 36327112 | T | C |
| Osa01LNT0046100.2 | 1 | 36327127 | A | G |
| Osa01LNT0046100.2 | 1 | 36327906 | T | G |
| Osa01LNT0046100.2 | 1 | 36328447 | G | A |
| Osa01LNT0046100.2 | 1 | 36329117 | T | G |
| Osa01LNT0046100.2 | 1 | 36329462 | A | T |
| Osa01LNT0046100.2 | 1 | 36329501 | C | T |
| Osa01LNT0046100.2 | 1 | 36330401 | T | C |
| Osa01LNT0046100.2 | 1 | 36332458 | T | C |
| Osa01LNT0046100.2 | 1 | 36332529 | T | G |
| Osa01LNT0046100.2 | 1 | 36333006 | A | G |
| Osa01LNT0046100.2 | 1 | 36333012 | A | G |
| Osa01LNT0046100.2 | 1 | 36333031 | T | C |
| Osa01LNT0046100.2 | 1 | 36334387 | T | C |
| Osa01LNT0046100.2 | 1 | 36334877 | A | T |
| Osa01LNT0046100.2 | 1 | 36335088 | T | C |
| Osa01LNT0046100.2 | 1 | 36335611 | G | A |
| Osa01LNT0046100.2 | 1 | 36336079 | A | G |
| Osa01LNT0046100.2 | 1 | 36336453 | A | G |
| Osa01LNT0046100.2 | 1 | 36336508 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0046100.2 | osa-miR5793 | Cleavage | 4.5 | 16.937 | 1 | 21 |
| Osa01LNT0046100.2 | osa-miR1319b | Translation | 5.0 | 13.59 | 1 | 24 |
| Osa01LNT0046100.2 | osa-miR5836 | Cleavage | 4.0 | 14.91 | 1 | 21 |
| Osa01LNT0046100.2 | osa-miR6245 | Cleavage | 5.0 | 21.518 | 1 | 21 |
| Osa01LNT0046100.2 | osa-miR6256 | Translation | 3.5 | 20.65 | 1 | 22 |
| Osa01LNT0046100.2 | osa-miR171a | Cleavage | 5.0 | 19.201 | 1 | 21 |
| Osa01LNT0046100.2 | osa-miR159a.1 | Cleavage | 5.0 | 13.25 | 1 | 21 |
| Osa01LNT0046100.2 | osa-miR159b | Cleavage | 5.0 | 13.25 | 1 | 21 |
| Osa01LNT0046100.2 | osa-miR167d-3p | Cleavage | 4.0 | 21.547 | 1 | 22 |
| Osa01LNT0046100.2 | osa-miR416 | Translation | 5.0 | 13.125 | 1 | 21 |
| Osa01LNT0046100.2 | osa-miR820a | Translation | 4.5 | 21.035 | 1 | 21 |
| Osa01LNT0046100.2 | osa-miR820b | Translation | 4.5 | 21.035 | 1 | 21 |
| Osa01LNT0046100.2 | osa-miR820c | Translation | 4.5 | 21.035 | 1 | 21 |
| Osa01LNT0046100.2 | osa-miR1435 | Translation | 3.0 | 17.047 | 1 | 20 |
| Osa01LNT0046100.2 | osa-miR2097-3p | Translation | 4.5 | 17.109 | 1 | 22 |
| Osa01LNT0046100.2 | osa-miR5501 | Cleavage | 4.5 | 19.816 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0046100.2 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0046100.2 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0046100.2 | 1 | yd1 | Morphological trait | Seed | C2340 | C86 |
| Osa01LNT0046100.2 | 1 | yd1b | Morphological trait | Seed | C547 | C2340 |
| Osa01LNT0046100.2 | 1 | qNSB1-1 | Morphological trait | Panicle/flower | C86 | C2340 |
| Osa01LNT0046100.2 | 1 | qSSBp1-1 | Morphological trait | Panicle/flower | C86 | C2340 |
| Osa01LNT0046100.2 | 1 | qChll1a | Morphological trait | Culm/leaf | C86 | C813 |
| Osa01LNT0046100.2 | 1 | qH2O21 | Others | Others | C86 | C813 |
| Osa01LNT0046100.2 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0046100.2 | 1 | qLVBTS1-1 | Morphological trait | Panicle/flower | C2340 | C86 |
| Osa01LNT0046100.2 | 1 | sf1.1 | Physiological trait | Sterility | RM212 | RM315 |
| Osa01LNT0046100.2 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0046100.2 | 1 | nan | Resistance or Tolerance | Insect resistance | RM543 | RM472 |
| Osa01LNT0046100.2 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0046100.2 | 1 | ng1 | Morphological trait | Panicle/flower | RG374 | RG394 |
| Osa01LNT0046100.2 | 1 | ng1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0046100.2 | 1 | sf1 | Physiological trait | Source activity | RG374 | RG394 |
| Osa01LNT0046100.2 | 1 | sf1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0046100.2 | 1 | nan | Physiological trait | Source activity | RG374 | RG690 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)