© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0046300.1
CGAGGATGTATTGTGGTATGAAAGAGTGAAAGATGAGAGCAACCATATTTTGTTTCAAAGTTCCATTTATATGGGAGGCGAGTATGTAATAGCTGATAATGATTATAATGGAAAAATGGCTTCACCATGGACGGGCAAAGCCTGATAGCTCGAGTGCCCGTAAATAATGCCCAGTTTACATAATCACTGTCAGCTGACTGAAGGGTATACCAGAAAGTTGACTAAGGTCTATGCATTGTTAATAAACATCCCAAGGCAATTGTGCAAAACTATTATTATGTTTATTACTAAAAGACATGCAAATTCCAACTGTAGTATCATCACAATTCTGATGAAGCAATGTTAAAGTAAGAAAAGGAATGATTCTATCTGCTGAACAGACTTACATGTAATTTCCCTTTTCCCTTGCACTGATGAGGAGGCATGATGCTTAGAAACGGGGCACTTTTGACAGAGGCCCCATTGTGGGCATTGGTGAAGGCTCAGTAACCGGAGGTCTTGTTTGATGGTTGGCAACTGAATTGTTAATTACCAATTTATTTCCTGTGCTTCTAATACCAGCAGCATCACATTCTGGTTGTTGAGGGTCCACTGATACCTTTACCTGTTGCAGTTTATTGTTTTAAATAATCCAATCAAACTTTTGTTTGAGCTTATTGCTGAATAGCACAGCAGCAGTACATGCAATGCAAGATGCCCAGATGATGAGAATAAAGGCAATGGCAAAAATATAAGTGCTAGTTCTATTTCAAAATAACAAACAGACAACATTGCATTCTAAACTTTTATAACCAAACAAACAAAGGAAACAGGGAAAATTGCTGAATTAATGTTCCCTTTACTAAGTAAATTCTACTAGAAAGCACTAGACTATGGTACTTTGATAGCGATTACCCCCATACATTCAAAGTCATAAAACCTAAAACCCAAAAACAACAAAATGGCTACAATAGCCAGGTCAATTCCCTCAGAAGTTGGGTCCAGATGTCCAGTTGGCATATTGCATAACATGAGTGCACATGAACGAAGATTAAGAAAAACAGTTTCACAAAATATAATAAGTAATAGAATGGCATTTCTTAGTCTTACAGGATGTCTTTGCGGATTCTTGTCCTCCCTTAAGAAACCAGGAACAGATAAGTGCCAATTTTTTTCTAGGTGCAGCAATACATCCTTGGCTTCCAGGACTGATGATTTCCTATGCTTCGCAAGGGTACACGCAAATGCAGTCACCTAGTAACAAATAAAAAAGCAATCTCCAAAAGCAAATCTTCCACTTCTGGATCAACCTTGCCCAGGGGATCTACCTGTGAAACCAAATCTTGTATTTTTCTCTTCCCAAGAAGTTGATTAGTTACTTCTGCTCCTTGACTTGCACTTCCACCAGTCATAGTTCCACCTGATAAAGGAGTGCCCGGTTGTGATCCTGTCAGGTTCATGGACTTCTGGGAACCAGATGCTGATATCCTTGGAGATTGTTGTTGTTGCTGAAGTTGCTGTAGAATGTGTTGCTGCTGTAAAAGCTGGGTATTGAGATGAGGATGCTGTTGTTGGGTTTGTGCGATTTGGTGTTGATTCAATCCTGACTGCTGTTGAAGTTGATGTATTAATAGCATCCTTTGTTGATGCTGAAATTGTTGTGGAGAAACAGGTGATCCCAGCGATGATTGCATTTGTTTTAACCATGCTGCCTGCTGCTGTTTCTGAGGAAGGGACATTTGTGCCATCGGCCCATTTGTCGACGATCCAGGTAGCTGTGGATTTAATGCAGCAATCGATGCTGTTCTTGTCAAGCCTTGACCCACAACCTTCTGTGGAGACAGTGTGCCTTGCTGTGATGTCTGCTGCGGCCTCAATTGTGCTTGTGCATGGGCAAAACGTTGCTGATTATATGGAATAGTTCCATTTCCTCTCATACCACCCATGACTCCCATGGACTGCATACCTTGTAATGCTTGAGCTGCATTGGCAGTATTAAATTGTGCACCTTGCACCATACCCTTCTGCCTTGGCTGCGCCATCATCTGTGACTGGAGACCATAGTGCGCCGCAGATGCTGCGTTCCCCTGCCCTTGCAGCATCCCAATCTGGCCTTGACTAAGCATGGCCGCGCGAGCAGCCAGCTGCTGCTGCTGCTGCTGCTGTTGTCCCACCTGTCCTCCACCTCCCGAGAAGTTCACCTGACTGCCGTACATCCTGGCCGCAGCAGCAGCGTACTGTGGAAGCTGGCCGACAGCGGCGAGGCGGGAGCCCGAGCCCGAGCGGTGGATCTGGCCGAAGCCTCCAGCCCCGGCCGCCGCCTGGCCGGGCGAAGGAGCCTGCATCTGCGGCGGCCGCGGGGGGTAGTCCATGGCCCCGCCGCCCGCCGCGGACGGGTCGAGCTGCGGGGACGAGATGGCGGACAGGTCGGAGACGGTGGGCGACGGTGGGATTTGGGGGGAGAGGAGGGGGTTAGGGTTGGGGTTTTGCGGGGTGGAGACGGCGGCGGCGGCGAGCTGATCGGGCTGCGGCGAGGCGGTGGCGGCCGCGGACGGCGGATCCGCCATGGCGGGCTGGGGGCGGCGGGGCTCCGGCGGCGGTGGGCGGCGGCCGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0046300.1 | 1 | 36388603 | G | A |
| Osa01LNT0046300.1 | 1 | 36390065 | A | G |
| Osa01LNT0046300.1 | 1 | 36389554 | A | C |
| Osa01LNT0046300.1 | 1 | 36388719 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0046300.1 | osa-miR5796 | Cleavage | 5.0 | 14.245 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR5802 | Cleavage | 5.0 | 15.11 | 1 | 24 |
| Osa01LNT0046300.1 | osa-miR5802 | Translation | 5.0 | 12.088 | 1 | 24 |
| Osa01LNT0046300.1 | osa-miR812v | Cleavage | 5.0 | 19.099 | 1 | 24 |
| Osa01LNT0046300.1 | osa-miR5823 | Translation | 4.0 | 16.724 | 1 | 24 |
| Osa01LNT0046300.1 | osa-miR169a | Cleavage | 4.0 | 18.291 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR169b | Cleavage | 4.0 | 18.291 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR169c | Cleavage | 4.0 | 18.291 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR169d | Cleavage | 3.0 | 18.291 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR169e | Cleavage | 4.0 | 18.291 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR169f.1 | Cleavage | 4.0 | 18.291 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR169g | Cleavage | 4.0 | 18.291 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR169h | Cleavage | 4.0 | 18.291 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR169i-5p.1 | Cleavage | 4.0 | 18.291 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR169j | Cleavage | 4.0 | 18.291 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR169k | Cleavage | 4.0 | 18.291 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR169l | Cleavage | 4.0 | 18.291 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR169m | Cleavage | 4.0 | 18.291 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR172a | Cleavage | 4.0 | 13.901 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR172b | Cleavage | 4.5 | 13.901 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR172c | Cleavage | 5.0 | 13.901 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR172d-3p | Cleavage | 4.0 | 13.901 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR816 | Cleavage | 4.0 | 11.838 | 1 | 20 |
| Osa01LNT0046300.1 | osa-miR1428a-5p | Translation | 4.0 | 17.356 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR169r-5p | Cleavage | 4.0 | 18.291 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR1439 | Translation | 4.5 | 10.889 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR2870 | Translation | 5.0 | 20.659 | 1 | 21 |
| Osa01LNT0046300.1 | osa-miR3979-3p | Cleavage | 4.5 | 10.046 | 1 | 20 |
| Osa01LNT0046300.1 | osa-miR5498 | Cleavage | 4.0 | 12.406 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0046300.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM543 | RM472 |
| Osa01LNT0046300.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0046300.1 | 1 | yd1 | Morphological trait | Seed | C2340 | C86 |
| Osa01LNT0046300.1 | 1 | ng1 | Morphological trait | Panicle/flower | RG374 | RG394 |
| Osa01LNT0046300.1 | 1 | sf1 | Physiological trait | Source activity | RG374 | RG394 |
| Osa01LNT0046300.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0046300.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0046300.1 | 1 | ng1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0046300.1 | 1 | sf1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0046300.1 | 1 | nan | Physiological trait | Source activity | RG374 | RG690 |
| Osa01LNT0046300.1 | 1 | yd1b | Morphological trait | Seed | C547 | C2340 |
| Osa01LNT0046300.1 | 1 | qNSB1-1 | Morphological trait | Panicle/flower | C86 | C2340 |
| Osa01LNT0046300.1 | 1 | qChll1a | Morphological trait | Culm/leaf | C86 | C813 |
| Osa01LNT0046300.1 | 1 | qSSBp1-1 | Morphological trait | Panicle/flower | C86 | C2340 |
| Osa01LNT0046300.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0046300.1 | 1 | qH2O21 | Others | Others | C86 | C813 |
| Osa01LNT0046300.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0046300.1 | 1 | qLVBTS1-1 | Morphological trait | Panicle/flower | C2340 | C86 |
| Osa01LNT0046300.1 | 1 | sf1.1 | Physiological trait | Sterility | RM212 | RM315 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)