© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0046400.1
TACATGAAGGGAAGATCAATGTTTTTTCACCCTCCGAACAAATTGATTCAGACTGATCATCAAGCCATGTCGCCAAGTGATTGACTTATATACCATCCTAACATCATACTAGCAGTACATTACAAGTGCATCACCAGCAACCTGAGGCAGCAGCCACAATCACCCGACAAAATCATGCAGCAAGTGACCACCAATCTCCTTCCCGAAATGCCGGTCCTGACCTCCAAATGAGCTCATCACATAGGCGTCACTGACTTCCTCCAGTCCGAAACGGTGAGCTAGGTTGGCCGGGAGAGCAGCCGGGAGAGGCTCGGCGATGCAGACCCTGTTGTTCTGGTGAAGACCAAGGGTGAGGGAGACACCGCCATTGCCGCCTCCGATACCAACACCGCCGACCTGCTGGTGCTGATGATGTGGTGATGCAATGTTGTGCTGCGAGGTCAGCCCGTTGTATGCGAAGCTCACCTGTCCCTGGATGGACTGGGACATCTGGGAGAGCTCATCCGGGAAGCCCTGGGAGGCAGCGGTGTTGTGGTTCCGAGTTATGCTGCTGCTCTGTCCAGGATGGGAGTCCGAAGGAACGGAGGGATTCCCGCTGCACTGCGAAGAATGCTGGGCCTGATGATGCACGCTATGCTGGCCCTTGTCAACCACCGAGTGCTTGTGCATTTGCCTCATCTCTAGGTTGTGAATTTCTTCCACCATTGGCTTCCACAACCTAACCCTTGCGTTGATAAACCAGTTCGATACCTGGTTGCGTGTCAAGCCTGTTTGTTTTGCTAGCATTTGCTTATCACCATCGGTAGGATACCTGCACGATTGGAATCTGAAAATGTCACTGATGCAAAATTATAGTGTTTTCTAAAAGAACAAAGTACCAGATATAGCGCAAAATCAAATAATCAAGAAATTTCCGCTATTACAAAAGACACTTGTGATGTGCATGCTTAACGATGGTTTACAGGATCACAACAAATATTTTACATGGCGAATATCCAAGCAAAGATGTAGGCAAACACATCTTCCAAGTCGAACCTTACAAAGGATTTGATCAATACGGGAACTAATAACACTAGGACCAACATCTGACAAATAATGGATTTCAGTGACTTTTTTTAAAGATGATGACTGATCCTTTTTTTAAAGTAATAAACAGACAGACAAACCCCTTACTGGATGAAAATGGCTAGCACTAAACTACTGTACTAATTATCTCAAACTGAATATCTCGAGCACATGTCAATCAACTTGATGTAACCACCAGTAGGGCTTAGCTACAGCCTTTAGATCATATATATAATGCAAAATGATCATACTACAAAAACTAAAAAGAATATGCCAAACAAACTACATTATGATGATGCTTATTATAGCCTAAGGTATGTACTTTTAAGATTTAGTTCGAAGTAATGCCCATCTGGCAAGTTAATTCCAGCATTAACGTGTTCTAAAAGCCACTCTACTTATGAGAAGCCGGGCCACCACATTCATACATTACAGCCAGAAACAACAAATCCAGGAAGTTAATACGTGATTAAGAATGCATCAAACAAGCAGCAGGAATGCCACTATTTAGATCACCAAGTCGAAAGTATGATCTCTAGTAGTACAGCTCAACACACAGTTAGGTACAGGTTTAAAAGTTATGTTAATGATGGATTGGAAGCCATGCCTGCATGAGGCCATAGCCTTCTATCAGACAGGCAGGGTCGCTTGCTATCACCAAACCATCAACGGATCAACCCCACGGTTCCAGTGTCACGTACTACTGATCATATCAAAAAGGAACAACCACACTCACCACAAATGCTTAGGGACTACTGTTATCCTCATCTAAAGCAAGCAACTGTAGCATCATCATCATTGTCTTGGAATGCGTGCAGCTAATGAACCCAGAGTTAACCATAAAGCAATAAGAAGATCAAAGGGCTTACGGGTGCAGGAAGTGTTCGAACAGCCACGCGCGTAAAACGGACACAGCGCGCTCGGGGAGCCCCCTCTGTGGGCGCCAAATATTGTGCGGCTGGCCGAACGCGCTCGCGCTGTTCGCTCGCTGGAGGCCGGCGCCGCCGCTGCTACCCCCGGCGAGCCCGAACACGGCGATCTCCTTGTTTAGCCCGTCCTTCACAGCGACCTTGTTGCTCGTGTTGCGCAGCTGGTTCAGAATCATGCTCTTCAAGCACTTGAAGTGCTTCGCCATCGCCCTCAGCGCCAATGCCGCGAACGGCGCGGCGTTGCTGAACCCGGCGACGGTCTCGAACGAGGCCATCACAGCCTGAACCTGCTGGTAGTACTGCCGGTACCTCTTGCAAACCTAAAAAAAGATATTGCTGTTGGGTTAGAATTCGATGAGAGATAATCTACCAACAAAGAATGATTAGATAAAAAGATATCCATGTTAGGAAAAGGAAGCAGTGTGCTTTTGTTTTCATGTGGATATGACACGAACAAAGCAAGCGTAGCTCCCAATTATGGGAGAGAGATGTTAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0046400.1 | 1 | 36446837 | A | G |
| Osa01LNT0046400.1 | 1 | 36446947 | C | T |
| Osa01LNT0046400.1 | 1 | 36447224 | T | C |
| Osa01LNT0046400.1 | 1 | 36447481 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0046400.1 | osa-miR5824 | Translation | 5.0 | 23.372 | 1 | 24 |
| Osa01LNT0046400.1 | osa-miR5512b | Translation | 4.5 | 18.483 | 1 | 21 |
| Osa01LNT0046400.1 | osa-miR1861o | Cleavage | 5.0 | 16.351 | 1 | 22 |
| Osa01LNT0046400.1 | osa-miR172a | Cleavage | 5.0 | 13.715 | 1 | 21 |
| Osa01LNT0046400.1 | osa-miR408-5p | Cleavage | 4.5 | 20.84 | 1 | 21 |
| Osa01LNT0046400.1 | osa-miR172d-3p | Cleavage | 5.0 | 13.715 | 1 | 21 |
| Osa01LNT0046400.1 | osa-miR444a-3p.1 | Cleavage | 3.5 | 16.722 | 1 | 21 |
| Osa01LNT0046400.1 | osa-miR444d.1 | Cleavage | 3.5 | 16.722 | 1 | 21 |
| Osa01LNT0046400.1 | osa-miR1851 | Translation | 5.0 | 18.764 | 1 | 21 |
| Osa01LNT0046400.1 | osa-miR1861a | Cleavage | 5.0 | 16.351 | 1 | 22 |
| Osa01LNT0046400.1 | osa-miR2864.2 | Cleavage | 3.0 | 10.021 | 1 | 21 |
| Osa01LNT0046400.1 | osa-miR5485 | Translation | 5.0 | 24.259 | 1 | 21 |
| Osa01LNT0046400.1 | osa-miR5490 | Cleavage | 4.5 | 23.497 | 1 | 21 |
| Osa01LNT0046400.1 | osa-miR5512a | Translation | 4.5 | 18.483 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0046400.1 | 1 | qSSBp1-1 | Morphological trait | Panicle/flower | C86 | C2340 |
| Osa01LNT0046400.1 | 1 | qChll1a | Morphological trait | Culm/leaf | C86 | C813 |
| Osa01LNT0046400.1 | 1 | qH2O21 | Others | Others | C86 | C813 |
| Osa01LNT0046400.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0046400.1 | 1 | qLVBTS1-1 | Morphological trait | Panicle/flower | C2340 | C86 |
| Osa01LNT0046400.1 | 1 | sf1.1 | Physiological trait | Sterility | RM212 | RM315 |
| Osa01LNT0046400.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0046400.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM543 | RM472 |
| Osa01LNT0046400.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0046400.1 | 1 | ng1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0046400.1 | 1 | ng1 | Morphological trait | Panicle/flower | RG374 | RG394 |
| Osa01LNT0046400.1 | 1 | sf1 | Physiological trait | Source activity | RG374 | RG394 |
| Osa01LNT0046400.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0046400.1 | 1 | sf1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0046400.1 | 1 | nan | Physiological trait | Source activity | RG374 | RG690 |
| Osa01LNT0046400.1 | 1 | qNSB1-1 | Morphological trait | Panicle/flower | C86 | C2340 |
| Osa01LNT0046400.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0046400.1 | 1 | yd1b | Morphological trait | Seed | C547 | C2340 |
| Osa01LNT0046400.1 | 1 | yd1 | Morphological trait | Seed | C2340 | C86 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)