© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0046500.1
CAACCCTTACCGCCGCTATATATATATAAAGTTATAAACATAGATTTTCTTTCTCGTGTATACGTTTCCTATACCGCCGCATCTGCTTCATCGCCATCTCCATCTGTGTGAAGAACCCATAGATCCTAATGGGTGCGAAGACAGACAAAGGCAAGGTTTCAGAATAACCATCCAAGGTTCTAATCAAGAGAAAACCAAAAACATCCAAGGTTCGACGATCACAAGGCAGAGGGTTTGGGTATGGGCACCCATTGCCATCGGTCGTTGGTCTCCCTGTAGCCGAGGCAAAGAGGAGGATAAAACAATGCAGGCCAGATGTCTACATTGAGGTCCTTTCGGTAAATGCGATGCTAACTATGGCTTACCACTCGAATCGCGTTAGGCTCTTAGTGGACAGATTCAACAAGGTGGTAGAAGATCCTCACATTGGATAGGCTAGGCTCATATGCAGAGAACATGCTTTTATGATAGCTTAGTCCTAGCGGTGTCCTGCGTCTGGCACAATATTTGTTAATCGACTTTAGGTTATGCAAAACTGAAGTTGCTTTGTTTTTGGAAATTATTCAACCA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0046500.1 | 1 | 36499276 | A | G |
| Osa01LNT0046500.1 | 1 | 36499329 | A | G |
| Osa01LNT0046500.1 | 1 | 36499391 | A | C |
| Osa01LNT0046500.1 | 1 | 36499698 | A | G |
| Osa01LNT0046500.1 | 1 | 36499706 | G | A |
| Osa01LNT0046500.1 | 1 | 36499884 | T | C |
| Osa01LNT0046500.1 | 1 | 36499937 | T | C |
| Osa01LNT0046500.1 | 1 | 36499941 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0046500.1 | osa-miR439a | Translation | 4.5 | 9.398 | 1 | 21 |
| Osa01LNT0046500.1 | osa-miR439b | Translation | 4.5 | 9.398 | 1 | 21 |
| Osa01LNT0046500.1 | osa-miR439c | Translation | 4.5 | 9.398 | 1 | 21 |
| Osa01LNT0046500.1 | osa-miR439d | Translation | 4.5 | 9.398 | 1 | 21 |
| Osa01LNT0046500.1 | osa-miR439e | Translation | 4.5 | 9.398 | 1 | 21 |
| Osa01LNT0046500.1 | osa-miR439f | Translation | 4.5 | 9.398 | 1 | 21 |
| Osa01LNT0046500.1 | osa-miR439g | Translation | 4.5 | 9.398 | 1 | 21 |
| Osa01LNT0046500.1 | osa-miR439h | Translation | 4.5 | 9.398 | 1 | 21 |
| Osa01LNT0046500.1 | osa-miR439i | Translation | 4.5 | 9.398 | 1 | 21 |
| Osa01LNT0046500.1 | osa-miR1854-3p | Cleavage | 3.5 | 22.323 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0046500.1 | 1 | sf1.1 | Physiological trait | Sterility | RM212 | RM315 |
| Osa01LNT0046500.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0046500.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM543 | RM472 |
| Osa01LNT0046500.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0046500.1 | 1 | yd1 | Morphological trait | Seed | C2340 | C86 |
| Osa01LNT0046500.1 | 1 | sf1 | Physiological trait | Source activity | RG374 | RG394 |
| Osa01LNT0046500.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0046500.1 | 1 | ng1 | Morphological trait | Panicle/flower | RG374 | RG394 |
| Osa01LNT0046500.1 | 1 | ng1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0046500.1 | 1 | sf1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0046500.1 | 1 | nan | Physiological trait | Source activity | RG374 | RG690 |
| Osa01LNT0046500.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0046500.1 | 1 | yd1b | Morphological trait | Seed | C547 | C2340 |
| Osa01LNT0046500.1 | 1 | qSSBp1-1 | Morphological trait | Panicle/flower | C86 | C2340 |
| Osa01LNT0046500.1 | 1 | qNSB1-1 | Morphological trait | Panicle/flower | C86 | C2340 |
| Osa01LNT0046500.1 | 1 | qLVBTS1-1 | Morphological trait | Panicle/flower | C2340 | C86 |
| Osa01LNT0046500.1 | 1 | qChll1a | Morphological trait | Culm/leaf | C86 | C813 |
| Osa01LNT0046500.1 | 1 | qH2O21 | Others | Others | C86 | C813 |
| Osa01LNT0046500.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)