© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0046600.1
TTGGGCCATCGGCTCTTTCCCCAGGAGGCCAGGATGCACGGAGCGATGGATTATTGGTGTTGGTAGTTTCTCACTGCGAGGGGACCGGTATTGACAACAGAGTTGGGCGACACAACAGGATATGACAGTGAACATTTGGAATCATCTGTTCGTCACGGTGTCAAATCTCTCGTCATCTCGCTATCCACGAGCGTCTATTTTGGGGACTATTTATCAACAAGTTGATTTACTGATCCTGATCCTCGAAGTAATAATGACGACTGGGTGATTGTCGCCTGTTGATAGTTGCTATTGTCTGTTGATATGTGTACAGAGCACTACAAGGTTCTCTTCGATATACAGCGTCTGATAAGGACTAACGATGTAGGCGAAACAACTGCGGTGGATAGTTCCACTTTCATATGTTCTTGTACCTTTATCTTTTCAGTTTGTTCTCTTGAACTGTTGGTTCAAAACTCCCCATTTTCAAGGAGATCCAACCGAATTTGCTCCATATTCAAAATTCGCCAGCATTTCCTGACAACCTTACATTTAAGGAACACAAATGCCCTCCATCCTCATCAAACCTGATGCAAACTGGATATCTTGTGTCAGTTTCAATCCCTCTCATGTTGATGTTCGTTCGGAGAGGAAGGCTTATTATGTGCAAAACTCTCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0046600.1 | 1 | 36535175 | G | C |
| Osa01LNT0046600.1 | 1 | 36535442 | G | T |
| Osa01LNT0046600.1 | 1 | 36535521 | G | A |
| Osa01LNT0046600.1 | 1 | 36535657 | C | T |
| Osa01LNT0046600.1 | 1 | 36536140 | G | T |
| Osa01LNT0046600.1 | 1 | 36536164 | T | C |
| Osa01LNT0046600.1 | 1 | 36536256 | G | C |
| Osa01LNT0046600.1 | 1 | 36536435 | C | G |
| Osa01LNT0046600.1 | 1 | 36536693 | A | G |
| Osa01LNT0046600.1 | 1 | 36536946 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0046600.1 | osa-miR5817 | Translation | 5.0 | 9.314 | 1 | 24 |
| Osa01LNT0046600.1 | osa-miR166g-5p | Cleavage | 5.0 | 17.25 | 1 | 21 |
| Osa01LNT0046600.1 | osa-miR396e-3p | Cleavage | 5.0 | 11.897 | 1 | 24 |
| Osa01LNT0046600.1 | osa-miR1430 | Cleavage | 5.0 | 15.842 | 1 | 21 |
| Osa01LNT0046600.1 | osa-miR2098-5p | Cleavage | 5.0 | 18.653 | 1 | 20 |
| Osa01LNT0046600.1 | osa-miR5491 | Translation | 4.5 | 18.358 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0046600.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0046600.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0046600.1 | 1 | yd1 | Morphological trait | Seed | C2340 | C86 |
| Osa01LNT0046600.1 | 1 | yd1b | Morphological trait | Seed | C547 | C2340 |
| Osa01LNT0046600.1 | 1 | qNSB1-1 | Morphological trait | Panicle/flower | C86 | C2340 |
| Osa01LNT0046600.1 | 1 | qSSBp1-1 | Morphological trait | Panicle/flower | C86 | C2340 |
| Osa01LNT0046600.1 | 1 | qChll1a | Morphological trait | Culm/leaf | C86 | C813 |
| Osa01LNT0046600.1 | 1 | qH2O21 | Others | Others | C86 | C813 |
| Osa01LNT0046600.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0046600.1 | 1 | qLVBTS1-1 | Morphological trait | Panicle/flower | C2340 | C86 |
| Osa01LNT0046600.1 | 1 | sf1.1 | Physiological trait | Sterility | RM212 | RM315 |
| Osa01LNT0046600.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0046600.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM543 | RM472 |
| Osa01LNT0046600.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0046600.1 | 1 | sf1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0046600.1 | 1 | ng1 | Morphological trait | Panicle/flower | RG374 | RG394 |
| Osa01LNT0046600.1 | 1 | sf1 | Physiological trait | Source activity | RG374 | RG394 |
| Osa01LNT0046600.1 | 1 | ng1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0046600.1 | 1 | nan | Physiological trait | Source activity | RG374 | RG690 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)