© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0047200.2
GAAATATCAGCGTGGACATTCCACTTTAATTAAACTAACTTGTTTACAAATAACTGTATCCGTCAAGGAAACAGTCAATATTCATGACATACCCCTACCCCTACCTGTTTACAGCTATCCAACTACGCCAGTATCCTGTGAAGATTACAGCTTTGGTTGTATGGAGCAAACGGTCCAAGGTCAACAGAATCCACGATGCACCATGCCCAATTCTCTATAATTTATCACCTTCTAAACTCGGAGAGGCAAAAAACACTTTGCATGAAAATCATGGTTCAAGAGGCAGCCAGCCAACCATAATTGGAGAAGCGCTTCCAGTAATAAACCAATGGATTGCCAGAATGCCACAATTTTGAAAATGGCATGTTATCAACAGCTGGCCTCACATTTCAACATTATCAAACTCACCTCTGTGGGATATAAGGGGAAATTCAGCTGTTGCATCTTACTGGTCTCAAATGCTTCTTGATTTGTGGGTCCGTAGTTGTTTTCAAGGTCTTCAGCGCCTCTTCTGCAGCCTGAAGCTTCGCAAAATCTTTGTTCAAATCAATGCCCCTCCCAAGAATTTGTCCTCCTAATTCAGCCTGGAAATGGTATTCTCCATTTAATGCTGAGCCAGAATCCCGTACTTGATCGCGAAATACTACATGTTGGTCCTCCAAGCACTATCCAAAGCTTTTGAATGATCCTGTTCTTTTAATGTACTTCCAGATGGCTCTTCCATAGAAATATCCTCTGAGAGAGTAATATCTTCGAGAAAGCCATTTCCACTCCCAGGAGGCTTGTTCACATCTTTATTAAGAACTCCAGCAACAGGAGCCATGAATGACAAGTAATTGCTTTCCAAATTCTGGAGAGCTTTTTCAGCAGCTAGTACTTGGGCTTCATCTCTTGTTTTTCCAATGCCGATCCCGATTTTTTCATTACTAAATAGAACCTCAACAGAAAATTGCATGTTTTTTCCACTGCTTACAGTAGACCTGAACTCCACCCTGGATTCGCACAGCCGTCCAATTTCTTGCAACACCGTGACAAATAATGAGGGGGTTGTTGCCAATGATCCCCCGTTAGATTGGATATTTGTACCACCTGGAATGCCACGGAGTGCCACTCCGTCGTCATCTGACAAACGGGTTGATGATGGTATTTGTTTCTGGTCTCTAGGATATGCCAGCCCATTCAACCTCTTCCCTACTTCAGCTCCACTCATACCCTCAGGTATAGGGGCAACATCCTTATTGTTTGGTGCAAAATTAGTGTCCTCACAGACTAAGTAGTCACCAACATCAGGAGCATATGGAAGATCTAGCAACTCATTTTCATACATTAGTTCAAACACTTTTCTCAATAGATTTTCATCGAACTCTCTGAAGAAACCACCACGAACATTGCAAGCAACATTTCTTGCAACACAAAGCACAGGCACAGCATTTGCCATCTCAGCTTGTGGGGCATAATATGGAGTATATGCTGGGACAACATGAACTCGAGGTTGATCCTTCTCATCCCAAACCTGCAGTCGGTCATCAATTACCATGGCCATCTTCGGATGGCATCCTTTGTCTTTAAAAACATTCTGCAGACACTTTTTCGAACCTGACTTTACACATACTACACGCTCTGCAAGGTTATGAGAGCTTATCAAGTTGGCTTCTGGATCAAGAAGCCTCCACATCTCAAGAGCATAATCTCTCTCAGCCATTGTACATACATAGACCTCAAATCGTTTGCGTCCCTTAGCAGTCAGGTAACTTCTCAAATCCTCCCAAGCAGGCCTTAGCTTTACAAAAACACTAGTATCGCGAACCTCTGGATTTATGCGAGTTAGAATCGCATTCCTTTCTGGCAGCCTGATAACAGGCCGGAGAACACGCTCCTGCCCACCAGAGATAGGCAGAACTTCCTCCTTTTGGGTCCCAACGATTCTGCCATTATCTGTAACTGTATCTGTGTCAATGAACTCCTTGAGCAGCTCCCTGTCCTCAATATACCGCTTGATTTCTGCAGACATCCCTGCTATCCTGACGGGGTCGTCTTCAATATCCATCCTACGGGAAAGCATCTCGATCCGGTCCTCAAAGGACTTCATTGTGTTAGCGACAATAAGGGTTTCATCGAGATCAAATACGATAGCAAGGCACCGCAAGTTCAGCATCCCAACAGATGCTGCATAGATCCCAGAGCGTACTGAACAGCACCAAAAGCATGGCACCTTCTCCACCTTGCTCGGCATTGCCACTAGGTGTAGCTCCTCATCTCCAACTACTACCACTGCGCTCTTGTACTCGTTGAAGCAAGTGAGGTAGAGGCGGTGTAGGCTCGGGTGGGGAGGCATCAGCTTGGCCTGGAGCTTGCATCGCACGGAGAAGGGCGCGATGGTCTGCAGGATGGCGAGCGGCGGGCACCGCTCGCTCGTCGGCGAGAGGTGGCTGATGCGGATCTCGTTGCTCGGGAACGGCAGGCTCCCCTCGGCCCCCTGCTTCATCGGGAACACCTCCGCCTCGCCGAGGAACACGTCGCCGTGGAACATCCGCATGGTGACCCCACCGGCGGTGGCACCGGCCCCTCCTCCGGGGACGGCCGCCTGGGGCGGGGCGCGGGGCGTCGCCATCGCGGGCGAGAGGGAGGAATTGGAGAGAGAGAGAAGGGGGGAGAGTGAGAGCGCGCGCGGCGTGGCGTGCGCGAGCGAGAGAGGCGCCTTTTGCCTCTCCTTGGCTGCGGCCTGCGGCCTCCGCCTCCCGCTTCGACGGACGCGGATTCGCGGGTTTTGGCAATTTGGGGGGAAGAAAAAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0047200.2 | 1 | 37024470 | C | T |
| Osa01LNT0047200.2 | 1 | 37025172 | G | T |
| Osa01LNT0047200.2 | 1 | 37025391 | A | G |
| Osa01LNT0047200.2 | 1 | 37025529 | C | T |
| Osa01LNT0047200.2 | 1 | 37028533 | T | G |
| Osa01LNT0047200.2 | 1 | 37028538 | G | C |
| Osa01LNT0047200.2 | 1 | 37029278 | G | A |
| Osa01LNT0047200.2 | 1 | 37031245 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0047200.2 | osa-miR5143b | Translation | 3.5 | 15.453 | 1 | 24 |
| Osa01LNT0047200.2 | osa-miR5835 | Cleavage | 4.0 | 22.697 | 1 | 24 |
| Osa01LNT0047200.2 | osa-miR6255 | Cleavage | 4.0 | 10.2 | 1 | 22 |
| Osa01LNT0047200.2 | osa-miR156c-3p | Cleavage | 4.0 | 17.321 | 1 | 22 |
| Osa01LNT0047200.2 | osa-miR156g-3p | Cleavage | 4.0 | 17.321 | 1 | 22 |
| Osa01LNT0047200.2 | osa-miR169i-5p.2 | Cleavage | 5.0 | 18.482 | 1 | 22 |
| Osa01LNT0047200.2 | osa-miR444d.3 | Cleavage | 3.5 | 15.405 | 1 | 21 |
| Osa01LNT0047200.2 | osa-miR1858a | Cleavage | 4.5 | 24.104 | 1 | 21 |
| Osa01LNT0047200.2 | osa-miR1858b | Cleavage | 4.5 | 24.104 | 1 | 21 |
| Osa01LNT0047200.2 | osa-miR2100-5p | Cleavage | 3.0 | 17.275 | 1 | 22 |
| Osa01LNT0047200.2 | osa-miR3979-5p | Translation | 4.0 | 24.737 | 1 | 20 |
| Osa01LNT0047200.2 | osa-miR5143a | Translation | 3.5 | 15.453 | 1 | 24 |
| Osa01LNT0047200.2 | osa-miR5337a | Cleavage | 4.5 | 16.845 | 1 | 21 |
| Osa01LNT0047200.2 | osa-miR5486 | Cleavage | 4.0 | 16.024 | 1 | 21 |
| Osa01LNT0047200.2 | osa-miR5489 | Cleavage | 5.0 | 23.99 | 1 | 21 |
| Osa01LNT0047200.2 | osa-miR5491 | Cleavage | 5.0 | 17.103 | 1 | 21 |
| Osa01LNT0047200.2 | osa-miR5498 | Cleavage | 5.0 | 18.442 | 1 | 21 |
| Osa01LNT0047200.2 | osa-miR5502 | Cleavage | 5.0 | 10.742 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0047200.2 | 1 | qSSBp1-1 | Morphological trait | Panicle/flower | C86 | C2340 |
| Osa01LNT0047200.2 | 1 | pl1.1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0047200.2 | 1 | qChll1a | Morphological trait | Culm/leaf | C86 | C813 |
| Osa01LNT0047200.2 | 1 | qH2O21 | Others | Others | C86 | C813 |
| Osa01LNT0047200.2 | 1 | qPHT1-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0047200.2 | 1 | sd-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0047200.2 | 1 | qLVBTS1-1 | Morphological trait | Panicle/flower | C2340 | C86 |
| Osa01LNT0047200.2 | 1 | sf1.1 | Physiological trait | Sterility | RM212 | RM315 |
| Osa01LNT0047200.2 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0047200.2 | 1 | nan | Resistance or Tolerance | Insect resistance | RM543 | RM472 |
| Osa01LNT0047200.2 | 1 | nan | Physiological trait | Eating quality | RM8084 | RM6827 |
| Osa01LNT0047200.2 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0047200.2 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0047200.2 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0047200.2 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0047200.2 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0047200.2 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0047200.2 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0047200.2 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0047200.2 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0047200.2 | 1 | nan | Morphological trait | Seed | RZ730 | RZ801 |
| Osa01LNT0047200.2 | 1 | tn1-4 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0047200.2 | 1 | ph1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0047200.2 | 1 | fll1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0047200.2 | 1 | nan | Morphological trait | Root | RZ730 | RZ801 |
| Osa01LNT0047200.2 | 1 | sd1 | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Osa01LNT0047200.2 | 1 | qPHT-1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0047200.2 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Osa01LNT0047200.2 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RG810 |
| Osa01LNT0047200.2 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0047200.2 | 1 | Fh1-2 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0047200.2 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0047200.2 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG810 | RZ730 |
| Osa01LNT0047200.2 | 1 | qNOP-1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0047200.2 | 1 | qPL-1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0047200.2 | 1 | yd1 | Morphological trait | Seed | C2340 | C86 |
| Osa01LNT0047200.2 | 1 | qSF-1 | Physiological trait | Source activity | RZ730 | RZ538 |
| Osa01LNT0047200.2 | 1 | yd1b | Morphological trait | Seed | C547 | C2340 |
| Osa01LNT0047200.2 | 1 | qNSB1-1 | Morphological trait | Panicle/flower | C86 | C2340 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)