© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0047500.1
ACATTGGATCAAACCAGTCATTTCATTAGCTTGATTATTATATAAATTTACATCATACTTTGACATGTCTTATTTCTGTTCAAGAGTCTGGACTATTTACAAAATGTACCGTAAAGAATGAAAACTAAAGACGCAAACATGGGACCAATGGATCACACGATGTAAATAAGGGTGATGTGATCAAGCAACAATTCGAGATGCAGAGCACAAACCAAAAACAACGGAAAAAGGTTAATGTTATGGCCTTATATGGGTATTATATGTACTCACATTGAACTGCGACTCGCTTCATCATTCATCATCCCTTTAAAACTTTTGGCCAACCAGATTGCTGTTTCTCGAGGAGATACCTTATCCTTCCCGAAAGGCTTTAGAACAACCGCAAGCTCCTCCAGCCTATTGTGTTGCAGTAGATCCGCAGAAAGCTCCAGGAGTCCTTCAAGGGCCTCGGCTCGCTGCCTGAAAGACTTGACATCTAGAATTTCCTTCGTTGGGCTTGCCTCCTCCTTGAATCCATTGTTGATAGCAGTAGTAGTAGAATTTACTTCAGGGACAGTAAGAAATTTTACAACATCTGAACAGGCTGTTTTCGAGCTGATGGTATTAGTTTCCGAAATATTGGGCTTGGGTGCAGCACAATCAGGAAGTCTGTGAGGCACAAGATTATTTGATGGGATGCTTCTCGAATCCACCTCTTCTCTTACCACGTTGAGAAGCTTGCCAACATCTGAACTTTGGACTCCCATTTCAGCGTTCTCTGCAACTGCCTGTTCACCGCAGACACGGAAGCTGCTGTGTCTTATGACATGTATGACATCCTCAATTGGAGGGTTCAAATGGGGAGATGATGTTCTTTCCAGTGATTGAATAGGAGGGGATCCTTTTTCTAGTGCGAAGTTTTTCGTTGAAACAAATGGGGCAATATCTGCTACTGATGAAAGCAATTCTTGCACTGTGAACTTATCCTCATCATTCTGTACAATGGCATTGGCAGTGCTCTGTGATATCTTACTGCAGGGCACGTTGTCCTTGAAAATACTCACCTGCTCAGATATATCAGAAGATGGCTCCAAGGCTAAGTTTTCACAAACATCATCATTACTAGCCATACTCTTCTGGAAATTGGTGGTGTTTAGCTCCGAGCTAGGCATTGCTGTTAGGTCATGTTTTTGTATGGCAGCGTCAGGGATTGAGCACTTACAAGATGAAACCAACTGGGCTGATGAATCTTGTTTTGATGGTTCAGACAGCTCGGTATTTTCAGCATAAGCAATTGTGGAACTGGAACAATCACTGCTGTCTTCCTTGATAGATACAGCCCTCGGTGGAGCAGATTTTGCCCGTGCATTGCCAACTTTCATTTGAACACCCCCAAGAGGACTTGGGGGAGCCATTGGAAAACCTGGAGGCTCAATGATATCATTATCTGGACCATGGACAGGTCGACAAGGACTTTTTGCACGCTCCTTGATGACCTTATTGTGAGCTCGTTTTGTGTCAGCATGAAGTGGACTCTCTGCTCCCAGTGGCCTACGAGGGGGGATACTAAGGCGTCTAGAATAACTTGGTGGTGTCCTGTTCTTGACCTTTCCAACAGCTGCATCAACATCTTCCATTGCCTGCTTGGCAGGGTCTGGCTGCAGCGGCTCATCCTGTTTAATTTTAGCTTTTGGAGAATGTTCGACAATAGGGGACAAATGCTTCAGAGGAGGAGATGCTTGTGCCCGTTTCACAGGTTCACAGATGACCTTTGCTGATTCTCGTGATGTCACTTCACTAGATTTTGAACTGGAGGAGATGTCACTGCTATGCTTTGAATCATCAGACAATTGTTCTCTATTACTTGGTGAATTTAGTTTTACACGGCTAGCTCTAATAGGTGAATTATTTTGCCTGAGCTTGCTCTCTTCTCTTAGAGTTGTTAATATCTTCTTGATGATTTTTGGCTGCTTAATCTCGTTTCTAGGCCGCTGATCAACATGGATGGATTTAGATGAATCTTGCCTCTCTAATTCAGGACCCACAGTTTCCTTATTGCTTTTAACATCATCAGATCTTGAACAGTTTTTCACTGATACATGATCAGTAGCTTCAGCACCTTCAGTATCAATCGTGTTGTTGGAACTTGTAGATGGCCCTGATGTGTTCCTTTCACTTGACTGTATACTGTCAATATCGCTTCCAGAAATACTACTACACTGACTACCAGACATGCTTTTCTGACTGCTCCGTGAACTGGTAATGGGTTTCTCCAGTGAGTGAATGGGATGTGATATATCAGCAAATGGGCGGTATTGATTAACATAAGGTTGAAGGTATGGGCTTTTAAGAATCTCAGATGCCGTAGGCCGATGTTCAGGACTCTTCCTGAGCATGCTTTTGATAAGTGATTTCATAGATGGAGAGTAGCATGGAGGCAAAGGGCCAATGGAGGAGCGATTTATCTTACTAATTAGTCCAGCCATATCAAATGCCTTGAAGGCAGGCCGATGAGCAGCCATCTCGTACATACAACATCCAAGAGACCATATGTCTGACTTGAATCCGTAAGGAATGTCTGCAAGCAGCTCTGGGCACATGTAATTTGGTGTTCCCACAACCGAAGAGGTTAAATCATCTGCCTTTAAAGTCTTAGCCAGGCCAAAATCCCCAAGACGGATGTCCTGATCTTTTGTGAGAAATATGTTTGAGCACTTGAGGTCACGATGCAAAACAAAGTTTGAATGCAGATAGTCCACAGCTAATGCCAATTGAGCAAACCATTTCAGTAGTTTCTCCTCTGGAAAGTATGTTCCATTTGCTTTCTTCATCAGTTCAGCCATATCACCACCTTCACAGTATCCCGTCACGATGCAAACATAGCAGCCCTTCTCAACCCATGCTTCCTTGAACTCAACAATGTAAGGATGTTGCAGGCGAGCAATAAGGGCCATCTCTTGATGAGCAGACTTGCGACAGCGCTCTGTTTGCCTCGCGAGCCGAATTTTCTTCAGCACATACTTTTTCTTCTCGGTCTTGTGGTTCACGAGGATGGCAGCACCAAAGGCGCCACGGCCAATCTGCTCCATAACCTCGTATTGATCCATCCGTGAATCCATGGTTCCCAATCTCTTACCAAAACTTCAGCAATTTCACAGCAGCAAATCACCCTCGCAGAACTTCAATCTCCAGTACTCCAATGCCCAATCTCCACATCTCCTACAGGCAACAGCTCCACGCCGGAAGCGATTTCGCGGCTCTCCCCACCGACATTCGCCACGATCGGAGTGCTCCGGCTACGACGCCGCCGCCGCCGCCGCTCCACGGCGGGATCCCCGCCGAACCCCGCGACGCCCCGTTCGCCGGCGGTGGGGCACCGCGATGGGGCGTCCCCGCGCTCGCCGACGAGGCCTCTGCTCCCCCGCACCTGAGACCTCTCCCGCTGCAGGCTGCAGCCGGTGGCTCGTCGCCTCCTTTGGGCGATTCGATTTGATTTGCCTCTTCGCTGGCTTCTCGTTTTTGTTCCGGTGTGAGTTGCTTTTGGGTTTTTAAAATCGCCATAAGGGTGGGGGAAAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0047500.1 | 1 | 37418103 | T | C |
| Osa01LNT0047500.1 | 1 | 37418679 | T | C |
| Osa01LNT0047500.1 | 1 | 37418791 | C | A |
| Osa01LNT0047500.1 | 1 | 37420190 | T | C |
| Osa01LNT0047500.1 | 1 | 37420240 | C | T |
| Osa01LNT0047500.1 | 1 | 37421019 | A | G |
| Osa01LNT0047500.1 | 1 | 37422290 | C | A |
| Osa01LNT0047500.1 | 1 | 37422440 | T | A |
| Osa01LNT0047500.1 | 1 | 37421434 | G | A |
| Osa01LNT0047500.1 | 1 | 37420211 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0047500.1 | osa-miR5798 | Cleavage | 5.0 | 20.683 | 1 | 21 |
| Osa01LNT0047500.1 | osa-miR5802 | Cleavage | 5.0 | 13.059 | 1 | 24 |
| Osa01LNT0047500.1 | osa-miR5512b | Cleavage | 5.0 | 9.0 | 1 | 21 |
| Osa01LNT0047500.1 | osa-miR156a | Cleavage | 4.0 | 19.465 | 1 | 20 |
| Osa01LNT0047500.1 | osa-miR156b-5p | Cleavage | 4.0 | 19.465 | 1 | 20 |
| Osa01LNT0047500.1 | osa-miR156c-5p | Cleavage | 4.0 | 19.465 | 1 | 20 |
| Osa01LNT0047500.1 | osa-miR156d | Cleavage | 4.0 | 19.465 | 1 | 20 |
| Osa01LNT0047500.1 | osa-miR156e | Cleavage | 4.0 | 19.465 | 1 | 20 |
| Osa01LNT0047500.1 | osa-miR156f-5p | Cleavage | 4.0 | 19.465 | 1 | 20 |
| Osa01LNT0047500.1 | osa-miR156g-5p | Cleavage | 4.0 | 19.465 | 1 | 20 |
| Osa01LNT0047500.1 | osa-miR156h-5p | Cleavage | 4.0 | 19.465 | 1 | 20 |
| Osa01LNT0047500.1 | osa-miR156i | Cleavage | 4.0 | 19.465 | 1 | 20 |
| Osa01LNT0047500.1 | osa-miR156j-5p | Cleavage | 4.0 | 19.465 | 1 | 20 |
| Osa01LNT0047500.1 | osa-miR399e | Translation | 5.0 | 14.992 | 1 | 21 |
| Osa01LNT0047500.1 | osa-miR399f | Translation | 5.0 | 14.992 | 1 | 21 |
| Osa01LNT0047500.1 | osa-miR399g | Translation | 5.0 | 14.992 | 1 | 21 |
| Osa01LNT0047500.1 | osa-miR399k | Translation | 5.0 | 14.992 | 1 | 21 |
| Osa01LNT0047500.1 | osa-miR156k | Cleavage | 4.5 | 19.465 | 1 | 21 |
| Osa01LNT0047500.1 | osa-miR156l-5p | Cleavage | 5.0 | 19.465 | 1 | 21 |
| Osa01LNT0047500.1 | osa-miR159a.2 | Translation | 4.0 | 20.053 | 1 | 21 |
| Osa01LNT0047500.1 | osa-miR160f-3p | Translation | 4.5 | 23.063 | 1 | 21 |
| Osa01LNT0047500.1 | osa-miR1432-3p | Translation | 4.0 | 22.768 | 1 | 21 |
| Osa01LNT0047500.1 | osa-miR1865-5p | Cleavage | 4.0 | 14.455 | 1 | 24 |
| Osa01LNT0047500.1 | osa-miR1872 | Translation | 5.0 | 20.562 | 1 | 24 |
| Osa01LNT0047500.1 | osa-miR2866 | Cleavage | 4.5 | 15.203 | 1 | 20 |
| Osa01LNT0047500.1 | osa-miR2878-3p | Cleavage | 4.0 | 22.869 | 1 | 24 |
| Osa01LNT0047500.1 | osa-miR5083 | Cleavage | 5.0 | 14.371 | 1 | 20 |
| Osa01LNT0047500.1 | osa-miR5158 | Translation | 4.5 | 20.598 | 1 | 24 |
| Osa01LNT0047500.1 | osa-miR5507 | Cleavage | 5.0 | 14.994 | 1 | 21 |
| Osa01LNT0047500.1 | osa-miR5508 | Cleavage | 5.0 | 11.306 | 1 | 21 |
| Osa01LNT0047500.1 | osa-miR5512a | Cleavage | 5.0 | 9.0 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0047500.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0047500.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RG810 |
| Osa01LNT0047500.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0047500.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG810 | RZ730 |
| Osa01LNT0047500.1 | 1 | qNOP-1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0047500.1 | 1 | qPHT-1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0047500.1 | 1 | qPL-1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0047500.1 | 1 | qSF-1 | Physiological trait | Source activity | RZ730 | RZ538 |
| Osa01LNT0047500.1 | 1 | yd1 | Morphological trait | Seed | C2340 | C86 |
| Osa01LNT0047500.1 | 1 | yd1b | Morphological trait | Seed | C547 | C2340 |
| Osa01LNT0047500.1 | 1 | qNSB1-1 | Morphological trait | Panicle/flower | C86 | C2340 |
| Osa01LNT0047500.1 | 1 | qSSBp1-1 | Morphological trait | Panicle/flower | C86 | C2340 |
| Osa01LNT0047500.1 | 1 | pl1.1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0047500.1 | 1 | qChll1a | Morphological trait | Culm/leaf | C86 | C813 |
| Osa01LNT0047500.1 | 1 | qH2O21 | Others | Others | C86 | C813 |
| Osa01LNT0047500.1 | 1 | qPHT1-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0047500.1 | 1 | sd-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0047500.1 | 1 | qLVBTS1-1 | Morphological trait | Panicle/flower | C2340 | C86 |
| Osa01LNT0047500.1 | 1 | sf1.1 | Physiological trait | Sterility | RM212 | RM315 |
| Osa01LNT0047500.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0047500.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM543 | RM472 |
| Osa01LNT0047500.1 | 1 | nan | Physiological trait | Eating quality | RM8084 | RM6827 |
| Osa01LNT0047500.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0047500.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0047500.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0047500.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0047500.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0047500.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0047500.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0047500.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0047500.1 | 1 | fll1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0047500.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0047500.1 | 1 | tn1-4 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0047500.1 | 1 | nan | Morphological trait | Seed | RZ730 | RZ801 |
| Osa01LNT0047500.1 | 1 | sd1 | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Osa01LNT0047500.1 | 1 | nan | Morphological trait | Root | RZ730 | RZ801 |
| Osa01LNT0047500.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Osa01LNT0047500.1 | 1 | ph1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0047500.1 | 1 | Fh1-2 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)