© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0003300.1
TGAACTTGGTAACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGCGGTCTGGATCTCCCGGGAGGTGATGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCCCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGAACCTGCTTGAGCACCTTGAAGATGTAGATCTTGTAGGTCTCGACGCTCTTCTTCCCCTTCTTCCGCCCCGCCTTCTTCCCCTCGCCGCTGCCCTTCTCGCCCTTGCCGGCGGGGAGACGCTTCTCCGCCTTGGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0003300.1 | 1 | 2852799 | T | C |
| Osa01LNT0003300.1 | 1 | 2843554 | G | A |
| Osa01LNT0003300.1 | 1 | 2847586 | A | G |
| Osa01LNT0003300.1 | 1 | 2854198 | G | A |
| Osa01LNT0003300.1 | 1 | 2838995 | C | G |
| Osa01LNT0003300.1 | 1 | 2842094 | T | C |
| Osa01LNT0003300.1 | 1 | 2842095 | A | G |
| Osa01LNT0003300.1 | 1 | 2843822 | G | A |
| Osa01LNT0003300.1 | 1 | 2844342 | A | C |
| Osa01LNT0003300.1 | 1 | 2844638 | C | A |
| Osa01LNT0003300.1 | 1 | 2844753 | G | A |
| Osa01LNT0003300.1 | 1 | 2845253 | G | A |
| Osa01LNT0003300.1 | 1 | 2845330 | A | G |
| Osa01LNT0003300.1 | 1 | 2845399 | T | G |
| Osa01LNT0003300.1 | 1 | 2840623 | A | G |
| Osa01LNT0003300.1 | 1 | 2846735 | T | A |
| Osa01LNT0003300.1 | 1 | 2846741 | G | A |
| Osa01LNT0003300.1 | 1 | 2847327 | A | G |
| Osa01LNT0003300.1 | 1 | 2847934 | T | C |
| Osa01LNT0003300.1 | 1 | 2848159 | G | A |
| Osa01LNT0003300.1 | 1 | 2848187 | T | C |
| Osa01LNT0003300.1 | 1 | 2848409 | A | C |
| Osa01LNT0003300.1 | 1 | 2848504 | T | C |
| Osa01LNT0003300.1 | 1 | 2848577 | G | A |
| Osa01LNT0003300.1 | 1 | 2849047 | T | C |
| Osa01LNT0003300.1 | 1 | 2849094 | T | C |
| Osa01LNT0003300.1 | 1 | 2849376 | A | C |
| Osa01LNT0003300.1 | 1 | 2849513 | C | T |
| Osa01LNT0003300.1 | 1 | 2849730 | A | G |
| Osa01LNT0003300.1 | 1 | 2850030 | T | C |
| Osa01LNT0003300.1 | 1 | 2850041 | A | G |
| Osa01LNT0003300.1 | 1 | 2850219 | A | T |
| Osa01LNT0003300.1 | 1 | 2850239 | G | A |
| Osa01LNT0003300.1 | 1 | 2850293 | A | T |
| Osa01LNT0003300.1 | 1 | 2850327 | A | G |
| Osa01LNT0003300.1 | 1 | 2850679 | A | G |
| Osa01LNT0003300.1 | 1 | 2850699 | G | A |
| Osa01LNT0003300.1 | 1 | 2850786 | T | C |
| Osa01LNT0003300.1 | 1 | 2851075 | G | T |
| Osa01LNT0003300.1 | 1 | 2851434 | C | T |
| Osa01LNT0003300.1 | 1 | 2852014 | A | G |
| Osa01LNT0003300.1 | 1 | 2852218 | C | T |
| Osa01LNT0003300.1 | 1 | 2852527 | A | C |
| Osa01LNT0003300.1 | 1 | 2852755 | A | G |
| Osa01LNT0003300.1 | 1 | 2852981 | A | C |
| Osa01LNT0003300.1 | 1 | 2853188 | A | T |
| Osa01LNT0003300.1 | 1 | 2855111 | T | G |
| Osa01LNT0003300.1 | 1 | 2856513 | G | A |
| Osa01LNT0003300.1 | 1 | 2856731 | C | T |
| Osa01LNT0003300.1 | 1 | 2854381 | G | A |
| Osa01LNT0003300.1 | 1 | 2840594 | G | A |
| Osa01LNT0003300.1 | 1 | 2842648 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0003300.1 | osa-miR2104 | Cleavage | 3.5 | 12.243 | 1 | 22 |
| Osa01LNT0003300.1 | osa-miR5819 | Cleavage | 5.0 | 23.327 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0003300.1 | 1 | gp1a | Morphological trait | Panicle/flower | RM1 | R753 |
| Osa01LNT0003300.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Osa01LNT0003300.1 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0003300.1 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)