© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0003400.1
GTCTCCTGAAGACAGACTATTGTTGCATTCATTTGTTCTACCAAAAGCTTAACACTTCCTTTTCTAGCTTGGTTGTTCAAGCCTCTAACATTCCAGTTTAGAATGAAACAGTCTAGCTGCGACATAAACAAAAGACACAACAGCTGAGGGGGCCTTGTATGCGATGGTTGGGATGGAGCTCAGCTGACGACCTCTGAAACACAGCCAGGAAGATTGGCAGAAACACGAAGAGGTGCGCATTTGCAATACAGAGAACAAGGACAGTATTCTTCTACTTAAGCAGCCTAACATCATCATCACGTAGGGCAACTTTTGACGCGACAACTGCTTCAAATCGGCACCATAGAGGCCGCCTTCTTAGCGCGCAGACGAACTCCTTTGCAGCCTCCGTTTTCCACCAGGGTCGTGATTGTCTTCATGTCTGCTGGGGAGAGCGGCTTCTTGTAATGCTTATTGCGGCAGGGTCGACGCAGCTTTGTTCCTGGCGCAGACAGCAGTGGCTGCTGAATGGGCGTGGTCACCTCTGCTAGGAATGTCTCCACATCATGCTGGGCCTCATCCACTAAGTTCTCTTGTGGTTCTGCAGCAGATGAAAGAACAAAAACAGGGGAAGCAGGGCGTGGCAGAGTAGTGTCAGGGGAATAAATTGAACCTCCCACCATAGCCTCATGCAGCATAGGATCTAGGTGCCTTTTAAGCATGAGCAACGCCCCTTGCTCCTTGTCTGCTGGAGCAGGGTCAGAGAGATGCGGAGGTGTCGCCGATTGACGCCTGATTCTTGTTTCTCCAGGTTTGACCGACCTGGACAGATGTCGGCTTCTACTTCTATTGATGTCAGCAGCTCGTTCTCTCTGTCTTCCCCTTGTCTCTTGATTGTATGAACTCCGGTTGTCAAGACCAGGCTCTCTGCTTTTGCTTGACGAACGACCGCCTAAGCGGTTCCAAAGAGAGCGACTTCTATGCCTCCTTCTTGAACGCTGCTCGTGGTCGTCTTCATCATCAGACCTTCTCTCCGGCGCCGGAAGGGTTCTGCAGGCTTGAATTGGGTGAGCCATCGACCTCATCCGGGTGACATCATCAGGCACTCCATAGTGCCACATGAAGACCCGACCCTGTCGAGAGAAGAGGTCCTGGACAGTGTCTATGTGAATGATGACCGGATAAGTGAGGCCTTTCTTTGTATCAGTTGGAGCCGGCTGGGATGGCTCCAGGTCAGGAAAAGGGATCTCAGTAGCCCTTGCTTCTCTATCTGGCCTTGTGATTGTGAACTGGGTGGCCTTTGGGATGGTGCTCAAGTCTAAGCTCCAAATCCAAAGATCAAAAGTACGGTTGAAGTTCCGGCGACGGGAGTATTCTTCTATGTAGTGCACTGAGCTTTTGCAGCCTATGAGCTTTGCCGCCATGTCTTCTGATCTTGCATGCATCGGGATACCTTCAATGCAGACTCGGGCGTGGTAGCGAATGTCAACAACTTCAGCATTTCGCCTTTCATTCCAAGGATTGAAATGATACACTCTTCCGCTTCGGGTCACCAATCTTGGTTCTTGCAGAACCTCCTCACGATCGCTATGATTAACGAAAGTGAGGAAGAAATCTTCTGGATGGAATTTTGTGATCTGAATGTCGGAACGATGGATGTAGAAAGCCGAGCGGATGTCATCGGCAAAGGTGCCGATTTCCACCTTCTGGCCCTCATCTGACCAAGCCACCACTGATCTTGCCGTGAAGAGTTGCTTCAATCTTTCATCTCGCTTGTCACCGCCACCATGCAGCTACCAAAATCTGGTCGAGAGACCAGACCACTGGGGACTGAAGCCATGGAGGTCGGGGCAGTGGAGGTGGTGAGGGGGGGGGGGGGGGGGGGGAAGGCTGAGGAGGAGAGCAGTGGTGGTGAAGGTGGGTGCGAAAGAGGTGGTGAAAGCTGCTCTGATTGCTGGAATTTATAGCGACACTCTCTGCAGGCTGAAGAGAGATGGCCGAATCTTTTGCAAACCCAACAACGAAGCGGATCCCTGCAATCTGCCACTTTATGGCCTGGTTGAAGGCAACGATAGCATTTACCTTCTGTGTGTTTGAGAAATCTCAGCTTCCTTGCAGCCATAATCTCTTGGTTGTTGGAGGAATTGAATGGGGATTTCTTCCTCCACCAGAACTTTTGCTTGACTTCCTGCCATGAATGCTCTTGCTGTGCCTGGGAAGGAACGCTGCTTTGGGAATGGAAGGCATGGTTATTGCGCCTTGTCAAATCAACAACCTTACTGCTGCTCAGAACTCTTGAAGTCGGAGGAGGTCGGCCAAGGATTGAGGGATTAAGACGACTTGCAATCGGTAGGCGCCGAGCTACTGGTGGGAATCCATCTTGTCTCACAACACCAGAGTAAAGAGGCCGGGAAGATGCACGATCTTTGGGGGCGGGGGGGGGGGGGGGGAAGAAATCTGCTTGAAGATCTGCTTGGGGATTTTCTGGACTGGATGCAGATTTGAAATCGACTCCGGGAGAGAGCCAGTCTCCTTACCTCGAGCTGTGCCCAAAGAAAGGGCTGGTGGTTGGATGTCAGATCCATGGAGGATCTCTTCTCTATCTTCAGAGGGGATAGGATCTAAGCAGCTTTCTTCAATGAGCTCTCCCTCCTCTAACGGACAGGAGGAGCTTTGAATGGTTGGGAAAAGACCTGGCGAGGAGTGGCTGGTGGGGAAGCATTCAAGAACTGGGGAAGAGATATGGAGTGGAGGATCTACTGGGTGGGAGGAGCGCGGCGCCGGGCGCCGCCGCGGGTGGGTGTCGGGGCTGGGGGAGAAGGCCATCAGTCGAGGAAGCGATT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0003400.1 | 1 | 2895301 | A | G |
| Osa01LNT0003400.1 | 1 | 2894082 | T | C |
| Osa01LNT0003400.1 | 1 | 2894226 | A | C |
| Osa01LNT0003400.1 | 1 | 2894248 | T | C |
| Osa01LNT0003400.1 | 1 | 2894754 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0003400.1 | osa-miR5790 | Cleavage | 4.0 | 22.487 | 1 | 24 |
| Osa01LNT0003400.1 | osa-miR5800 | Cleavage | 5.0 | 21.361 | 1 | 21 |
| Osa01LNT0003400.1 | osa-miR5813 | Translation | 4.0 | 17.137 | 1 | 22 |
| Osa01LNT0003400.1 | osa-miR390-5p | Cleavage | 4.5 | 24.132 | 1 | 21 |
| Osa01LNT0003400.1 | osa-miR444b.2 | Cleavage | 4.5 | 14.761 | 1 | 21 |
| Osa01LNT0003400.1 | osa-miR444c.2 | Cleavage | 4.5 | 14.761 | 1 | 21 |
| Osa01LNT0003400.1 | osa-miR444f | Cleavage | 4.0 | 14.761 | 1 | 21 |
| Osa01LNT0003400.1 | osa-miR444f | Cleavage | 5.0 | 15.713 | 1 | 21 |
| Osa01LNT0003400.1 | osa-miR1866-3p | Cleavage | 4.5 | 22.535 | 1 | 22 |
| Osa01LNT0003400.1 | osa-miR2091-3p | Cleavage | 4.5 | 17.056 | 1 | 22 |
| Osa01LNT0003400.1 | osa-miR2093-5p | Translation | 4.0 | 20.378 | 1 | 20 |
| Osa01LNT0003400.1 | osa-miR2864.1 | Cleavage | 4.0 | 24.016 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0003400.1 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0003400.1 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0003400.1 | 1 | gp1a | Morphological trait | Panicle/flower | RM1 | R753 |
| Osa01LNT0003400.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)