© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0003500.1
AAATATCAAGCTTAAATCTTTTTATATGCACATTCAAATGTGACGTACTGAAATATTTTCTGTACACGTTACATAAAACCATGACAATAACAAACAAATAGGGAATTCCTTGTTAACTTGGGTGCATTCATACAGTAACACAATATCAATGAACACAATAGAAAGTTCTATACATTCAACTATACAACTGCGGGTAGAGCCAGAACACGGCGAAGTGGGTAACATGCAGTCATTATTTTTTATTGCGATTTGGAGATGTCAGCTCTCAGCTCCTCTTCAAGTTCGTCAAACTCCCACCCACTTATCTCTTCAGGTGAGTATTTGTTAACTTGACCAAATTCTAATTCTAACTTTGCAAGTTCAGAATCAAGATCCAGCGGCTGGTCAGGTTTCGCTGGAGATTTTGGGGAGACCACAGTTTCAGCTTTAGGTGTAGAAGGTACCTGAACTGGTGAAGGGCTTGACTCAGCTCTCTCCTTTGTTGGAACCTTTGCTCGGCGGACTTCAATGTCTAACGTCGGTCGTTCTACAGACTCGAATCTCTCTCTAAGTTTCTCTATCTCAGAAAATAAGTTCCTGACGTCCTCATCATCCCTCCTAGAATTAACCCCTTGTTCAGAATAAAAGAGCTTCTTCATGTGATCAGTGATGCTAAAGGCAATTACAATCTTCTTTTCAGTTTCCAAATATTCTTCCTCAAGGGATTTCTGTGGACTTGTCTTTTCTGATAGTTCCTCATTGTCATGTTCTGTTGACACGTCCCTTGACTGCAGAACTGCCAAATTATCCACGTATGTGCAGATTCGCTCAATTGATGGGCTCAGAATTTCCTTGAATGTAGAAAGGTGATATTTAGTCAATTTCAGGAAATTGTCTGTACATCTCTCAAGCTCATCATTGGTTCTCTTTTCCTTCTGTTCATTATATGATGACTGAAGCTGCCACGTATCCTCAAGGAAATTGATCCAAGTCTTGACTACGCCAGCCTCCACATTACATGAGGTAATAGATTTTGAAAGTTCATTATCCTTCGCTTTTAAACTAAATATCATTTGATTGTTTGCTTCATCAAATTGATCCCTCTCTTCCCTTGTTTGCTTGAGACGTCCAATGGCAGCATTCAGTGAAATGTTGACCTTCTTCAACCGAGCCTCAAGTTCGTCACGTTGCTTCTCCAATTCAGAAATCTCAGCCGTCAACTCCTTTTCAACTGCACTCACTTCATTCTCCTTTTTAGCACGGAAGTTAAGAGCCTCTTCTTTCTGGCGCCTGTGATCCAAAATACGCTTCTCAGCCTTGGAAGATGAATTAGAGAGGGAAGTTGCTAAGACCTTTAATTTGTCAACCTTTTGGGAACGAATCTCAAGGGAGTCTCCGGCAGTAGATGTTTTTTTCTTCAGTAAAAGCTCTTCCATTCTAGAGCAGAATCGGACTTCAGAGAGTGCTTCTTTGAATGACTCAACAGTTGTAGCAGAAGTCCTTTCCGTAGTTTTTGCATGGTCTTCTTGAGTTTGTTGAACTCTTGATGTCTCCTTCTCATTTAGTTTCTTCCACAACTCTACAGCTTCAGCATCTATTCTCATAATGTCAGAATTCCTCTTTAGTCCAGAAATGGCACTTTGGGTAAACTGAAGCAACTCTTCACGTTTCACCAGGACTTCATCATGGTAATTTGAGAATGATTTTGCCAAGTCCTGTATACTGCTCATGATCGCATTATTGATTTCTTTCCCTCCTGTAAGACATAGGCCGAAAATTTCCAAAAGCAGGGGAACCTCTTCTTCATTAGGAGCTTGAAGAATCATGGACAACGTAATACCTTCAAGTGCCTGGCTATAGAGAAACACATCTCGAAAGTTCATCGGAGCTCCTCCAATGTCAGCATCATAAAACAAAACTCTTGCAAATGGTGGTTTTGAGGTGTTCGGTTCACTTGAATGGGCATTCTGTTCGGCAGCCCCATCTAGACCTCCAAGTTGAGCCTCAACCTCTTGTAGCGCCCTGAGCCAGTGCCTTAGCACCTGAAGCCTATCCTCCCCGCGTGATGAAACCGCGGCCTCTTCCAAGCGCTTCACCATTTTCTTGACACTTTTGTAGTTTTGAGTGCTCATCCGGTCGTTGAGGATCTTCGCGCCCTCGGCGACGGCCTGGCCGGCGTGGTGGGCGACGGCGTCGGCGTAGCCCAGCACGGCGCGGGCGACGCCGCTCCGGCCGCCCGCCTCGACGGCCTTGCTCACCGCGCTCCGCAGCCACGACGACATCGGCGGCGGTCGGCGGCGGGATCAATCACCACAACAACGGCGGCGGCGGAGGTAGGTGGGGGTGGGATGCCGCGGCGCTGTCTCGAGTCTCGACTGGACTCCTCTCCCGCGACCGGGGCTTCTTCAGGGGAGTTCCAAGTTCTCCAACACTGAAAGTTTCTGAACTGAAGAGATTTCGTGTACTTTTCGCTCTCTCTCTCTCTTCTTCTTCTTCTTCTTCTTTTCTTTTTCCCTTTATTCCTTTTCTCTTTTTTTTTATCTGGTAATAAAATATTTTTTTCTTGTTTGGATTGGGAGAGCTATGCGGTTCTGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0003500.1 | 1 | 2972185 | C | T |
| Osa01LNT0003500.1 | 1 | 2974321 | C | A |
| Osa01LNT0003500.1 | 1 | 2972543 | A | G |
| Osa01LNT0003500.1 | 1 | 2971188 | A | T |
| Osa01LNT0003500.1 | 1 | 2972304 | A | G |
| Osa01LNT0003500.1 | 1 | 2972739 | G | A |
| Osa01LNT0003500.1 | 1 | 2973011 | A | G |
| Osa01LNT0003500.1 | 1 | 2974399 | G | A |
| Osa01LNT0003500.1 | 1 | 2974516 | G | A |
| Osa01LNT0003500.1 | 1 | 2975348 | A | T |
| Osa01LNT0003500.1 | 1 | 2975949 | G | A |
| Osa01LNT0003500.1 | 1 | 2976116 | T | C |
| Osa01LNT0003500.1 | 1 | 2976612 | A | G |
| Osa01LNT0003500.1 | 1 | 2976635 | A | G |
| Osa01LNT0003500.1 | 1 | 2976873 | G | T |
| Osa01LNT0003500.1 | 1 | 2977038 | A | C |
| Osa01LNT0003500.1 | 1 | 2977085 | A | T |
| Osa01LNT0003500.1 | 1 | 2977112 | T | C |
| Osa01LNT0003500.1 | 1 | 2977511 | T | A |
| Osa01LNT0003500.1 | 1 | 2978405 | A | G |
| Osa01LNT0003500.1 | 1 | 2979326 | A | G |
| Osa01LNT0003500.1 | 1 | 2979790 | C | T |
| Osa01LNT0003500.1 | 1 | 2979995 | G | A |
| Osa01LNT0003500.1 | 1 | 2971145 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0003500.1 | osa-miR812t | Translation | 4.0 | 21.977 | 1 | 24 |
| Osa01LNT0003500.1 | osa-miR812u | Translation | 4.0 | 21.977 | 1 | 24 |
| Osa01LNT0003500.1 | osa-miR395b | Cleavage | 4.0 | 16.627 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395d | Cleavage | 4.0 | 16.627 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395e | Cleavage | 4.0 | 16.627 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395g | Cleavage | 4.0 | 16.627 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395h | Cleavage | 4.0 | 16.627 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395i | Cleavage | 4.0 | 16.627 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395j | Cleavage | 4.0 | 16.627 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395k | Cleavage | 4.0 | 16.627 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395l | Cleavage | 4.0 | 16.627 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395s | Cleavage | 4.0 | 16.627 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395c | Cleavage | 3.5 | 16.627 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395a | Cleavage | 3.5 | 16.627 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395a | Cleavage | 4.5 | 19.726 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395u | Cleavage | 3.5 | 16.627 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR156k | Translation | 4.5 | 13.442 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395m | Cleavage | 4.0 | 16.627 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395n | Cleavage | 4.0 | 16.627 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395o | Cleavage | 4.5 | 16.627 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395o | Cleavage | 4.5 | 19.726 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395p | Cleavage | 4.0 | 16.627 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395q | Cleavage | 4.0 | 16.627 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395w | Cleavage | 4.0 | 16.627 | 1 | 22 |
| Osa01LNT0003500.1 | osa-miR395r | Cleavage | 4.0 | 16.627 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR817 | Cleavage | 4.5 | 18.398 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR529b | Cleavage | 3.0 | 9.221 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR1425-3p | Translation | 4.5 | 17.537 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR1858a | Translation | 3.5 | 9.158 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR1858a | Translation | 4.5 | 6.319 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR1858b | Translation | 3.5 | 9.158 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR1858b | Translation | 4.5 | 6.319 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR1861b | Cleavage | 5.0 | 16.469 | 1 | 22 |
| Osa01LNT0003500.1 | osa-miR1861f | Cleavage | 5.0 | 16.469 | 1 | 22 |
| Osa01LNT0003500.1 | osa-miR1861i | Cleavage | 5.0 | 16.469 | 1 | 22 |
| Osa01LNT0003500.1 | osa-miR1861l | Cleavage | 5.0 | 16.469 | 1 | 22 |
| Osa01LNT0003500.1 | osa-miR1861n | Translation | 5.0 | 16.469 | 1 | 22 |
| Osa01LNT0003500.1 | osa-miR2928 | Translation | 3.5 | 15.353 | 1 | 20 |
| Osa01LNT0003500.1 | osa-miR395x | Cleavage | 3.5 | 16.627 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395x | Translation | 4.5 | 18.429 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR395y | Cleavage | 4.0 | 16.627 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR812n-3p | Translation | 4.0 | 21.977 | 1 | 24 |
| Osa01LNT0003500.1 | osa-miR812o-3p | Translation | 4.5 | 18.111 | 1 | 24 |
| Osa01LNT0003500.1 | osa-miR5071 | Cleavage | 5.0 | 13.715 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR5156 | Cleavage | 4.5 | 20.192 | 1 | 24 |
| Osa01LNT0003500.1 | osa-miR5498 | Cleavage | 5.0 | 24.617 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR5523 | Translation | 3.5 | 15.399 | 1 | 22 |
| Osa01LNT0003500.1 | osa-miR2873c | Cleavage | 3.5 | 10.237 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR159a.1 | Cleavage | 5.0 | 18.486 | 1 | 21 |
| Osa01LNT0003500.1 | osa-miR159b | Cleavage | 5.0 | 18.486 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0003500.1 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0003500.1 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0003500.1 | 1 | gp1a | Morphological trait | Panicle/flower | RM1 | R753 |
| Osa01LNT0003500.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)