© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0050500.1
CTTGTCAGAAAACATCAGGATTTCTCAGTGGATTTACATTGGAGTTGCATTTTATTCAGGCATGAGGGGGGAAAAATGGCAGTTAAATTAGTTACAGGTTGATAGGAAATGGAGAGATTATTACAGGCCAAAGAGATCTTATTAATCTGGCCTGTTTTACAGTTTATTTTTTTTCTTTGATGACAAATTTATGGGTGGCTGATGAAACTTTTTGTCAGTTGCGGATTGATGCTAGCATCTTACTTCACTTCTTTCACCTTTACAAGACCACCACTTTGCTTGCAAGAAACCATGGGTGATCCTTCTTTCTTTTCTCTTTTTTCTTTCACCAATCAGATCAAAACCTGGATCAAAGTTATCTAACTCTTCAGGAAATGAGGTCATTTTCATAGTCGGCAGATTTGCAGTATCTCTAACGAATTCGCATCAGATTGGATGCACATCTTATGCTGAATCCCTTTACTCTCTTGTGTCCTAACCAGGTTTTGATAGGTTAACATTCATCTTCAGTAGAAGGTTTCACGTTCTTACGACGAGGGAAAAGCATTCGCCTTATCTTCTTCTCTGCTGAACGTTCAGAGAGTGCCTGCGCATTAAACGAAAATCTAACTGTCCGAGCTTCCAAACCAGAGAAAGCTCTTACATCGATACCGAGACTGTCGATGCTAATCAAGCTAGCCTCCTCGACAGTGAGGCCTTTTTTCCTATGACAGAGGGACCTGAGTGCCATAGCGCACTGATCATCGTTTTCTTTAATGCGATTTATAATTTCTGAAGCAGAATTTGCAAGAATATCTGGTTCTGCATCTTGAAAATCTTGTGGATCAATCATCAACTGCTTCCCATATATGGAAAACAGCTCAACCGTCATTATTTCCAGTTTGTAGATTGTTGAATCAGTGCTACTTCCCACATTCGTGAAATCAAATCTCGATTTATCATCATCAATTAGGCCATTGGTTCCAGAAGCTGGTGCAGGTTCTCTTTTGCATTCATCTCTCCAATCAGACGAATAACCATCACCATTGCACTCACCATGAAATAAGCTCCTTAGATAAGATTCTTCTTCTATGAAAGCAGGTCTCAAATATCCTACAATTGAGACACCATTTGATGGACTATCCATCTTTTCCCTGTGTTTATCATGAACAGCCTGCATAGCAAAAGAATACACAGTATATTTATCATGGACTAGGTGGTTGATATGTAATATGGTGCTCGTTATAATTTAGGTTACGAACTATGCTTCCCAAAGCATCTACCTTTTCATGAACTGTTATAGGAAAATTTGGAGCAAAACAGTAAGTTCAAGTTGCTGGTTCAAAAGTTCATCCTGTTCTTTTGTTTACCATTTTACTCATTTTTTTAATGATATCTTTCATATACAACCAGTACTAACTGATTGAATACATATCCCAGAACAAGAGACAAAAATGCCTTTTGTCTTCCTTTTATCTGACCACTAAGTTCAGATCTCTATTTTTTTTTCTGTTACAGTTGACAGAGTGTATCTTGAAATAGGTAAGGCCATACCTTGAATTTCTACCTTCTTTTTCCCTTTTTGAAGTATCAAGTTGAGGTCCAGGCTCTTACTTTTGTTACCAGAAGATAAAGACTTTGCACCCTTCACAACATTATTTCTAAGAATATGATGTAGGTTGGAATTAACTAATCACTCACAGTATATTCATTGTTCACATTGCCAATACATTTATGAAAGTTATCCTAGTTAAAGTTTTCATCTGCTCCACTATTTCAATGGTTGCTGATGCTTGCAATAACTTTTGACGGTTTACCTTTGTCAAACACTTCGCAAAATAAATTGGATGTATTGCACGCATTGTTGCTGGCATCCCCCACTCTATAAGAATGTCAGTTATTTCTGTATCGATCTTGCTGTCGTTCTCATCAGGCATGTCTATAAAATTTTCAACATCCATGTAGTCGCTAAAATCACTAGTCACCACACTAGTTTCTCCAATAATAGGGCCATCCATTCCAATCAAAACTGTCACAGGATTGTTTGCAGCATCATCTTCCAAGATGTTCTCACTGTCGGGTACTTGAAAGAAAATGTCTCCATAGTCATCTACAATATACTGAAAGTCTGACCAAGCAACATGCCCATGAGGTTCATTATGCACTCTTGCAGGGAACACAAGTAATCCCTTGCTATTGGCCTCTACTACAGTTCTAGCAGTTTCCACATCTGTCAGTGACAGGTCCTTCTTTTTTGGACGTTCTTTAACTTCTTCAAGAGGATGGTAACCCCGATCTCTTGTGTACTTTGAATCTGGAACAGAATCTGAGTAATCTGCAGCCACTCGAACTTTGGAAAAAGATGGTTCCTGGTCTGTTGTCAGCCAGGAAGGTTGGATTGATCCAAAAGTATTTCGGCATCGAAAACTTAAACTAGAAAAGTCATGAAATCTCCGGATGTCAAGTGGGGTTTTAATCCAGTTAAAAGTGACCCCTGCTGCCATTGATAAACTCCAGCAAAGAACGATCAAATATGTTAAGTAGCTTATATATCACATCATCAGACAAAGGATAATTCCTTCAGCAAAAGCAGAACCAGTACTCCTCTAACAGTAAGCCCAATTCAGTGCCCTATCTTGTCCATCGAACTATATTAGGTCCATGAACTGGAGCCGCGCATATTAGAACAGAAGTCAAAATGATGAATTCAAATCAGGGAATATTTTCTACAACAGTACATAACCCATGCGCATCTTCCTCCTCAATAATTAATAAAAAGCAATCTTCCTCTGGAATGCAAGTTGCATCAACACAAGAGGGGAACAGAGAACAAAGAGGTGGGCAATGTGGTCATGATTCATGAAGTTGTTCAGATCGATTAGGAATTGTATTCCCCCGAAATGAAAGAACCAACTTTGGAAGAACAGGACCAAAGAATAAGGAAAAAAAATCCCCTCCAACTTTGAAAATTATCCCTTGTTACTTCAAAAAAAAAATCATTTGCCTTAACCCAGTAACCCTAATTCCTGAACAAAATGCGTTCTGGAGGGCCCCAGTGGATCAAGAACACTTTGCAAAATGAATCCTTTACTGTTAACACAAAATCGCACACTATCACGAATCCATATCTATGAAATGAATATCGGAGTGATCCAACCAAATTCTCTAAGCAACACCAAAGGATGTTATTACTAGGGAAAACGGAACAGTTGTACTGATCTGAGAAAAAAAAAAGGTTTCTCCTGTTCCTCGAACAGTTGTTCAACCCCCAATAGAGAAAAATAAAGAAACCCCATCTTGATCGGTTCTTTGCCTCTGTTCTACGAGCATACAATCCAATATGAGTAAAACCATAAAAATCATGCCGATTAGCGACTACAATCAGATCAAATACGGAAAGGGGAGACGAACAGCAACAGCATCGTACCGGTAAATCCGCCCCAAGGTCGGCTGTCAAGAAGGATAGGCGAGGCGGCGGATCGCGGCCTTCGCGAGCTGCGTTGAATCCTTTCGCTGCTTTCTTCCCCTGCCTTTGCCCTTTCTTGTTCTTGTCTCTCTCTTCGTCTCTCCTCCCCCCTTTTTTTTTTGTTTCCCTTTCTTGGACTTGGCGAGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0050500.1 | 1 | 39130263 | A | C |
| Osa01LNT0050500.1 | 1 | 39131243 | G | T |
| Osa01LNT0050500.1 | 1 | 39131780 | C | T |
| Osa01LNT0050500.1 | 1 | 39132700 | A | G |
| Osa01LNT0050500.1 | 1 | 39132972 | T | C |
| Osa01LNT0050500.1 | 1 | 39133918 | G | A |
| Osa01LNT0050500.1 | 1 | 39130606 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0050500.1 | osa-miR1319b | Cleavage | 5.0 | 7.131 | 1 | 24 |
| Osa01LNT0050500.1 | osa-miR5834 | Translation | 3.5 | 14.892 | 1 | 21 |
| Osa01LNT0050500.1 | osa-miR5834 | Translation | 5.0 | 13.122 | 1 | 21 |
| Osa01LNT0050500.1 | osa-miR5837.1 | Cleavage | 4.5 | 12.109 | 1 | 21 |
| Osa01LNT0050500.1 | osa-miR6256 | Translation | 4.5 | 10.443 | 1 | 22 |
| Osa01LNT0050500.1 | osa-miR1437b-5p | Cleavage | 5.0 | 16.4 | 1 | 21 |
| Osa01LNT0050500.1 | osa-miR5079b | Cleavage | 3.5 | 15.863 | 1 | 22 |
| Osa01LNT0050500.1 | osa-miR5079b | Translation | 4.5 | 12.544 | 1 | 22 |
| Osa01LNT0050500.1 | osa-miR5079b | Cleavage | 5.0 | 16.255 | 1 | 22 |
| Osa01LNT0050500.1 | osa-miR156a | Cleavage | 5.0 | 8.034 | 1 | 20 |
| Osa01LNT0050500.1 | osa-miR156b-5p | Cleavage | 5.0 | 8.034 | 1 | 20 |
| Osa01LNT0050500.1 | osa-miR156c-5p | Cleavage | 5.0 | 8.034 | 1 | 20 |
| Osa01LNT0050500.1 | osa-miR156d | Cleavage | 5.0 | 8.034 | 1 | 20 |
| Osa01LNT0050500.1 | osa-miR156e | Cleavage | 5.0 | 8.034 | 1 | 20 |
| Osa01LNT0050500.1 | osa-miR156f-5p | Cleavage | 5.0 | 8.034 | 1 | 20 |
| Osa01LNT0050500.1 | osa-miR156g-5p | Cleavage | 5.0 | 8.034 | 1 | 20 |
| Osa01LNT0050500.1 | osa-miR156h-5p | Cleavage | 5.0 | 8.034 | 1 | 20 |
| Osa01LNT0050500.1 | osa-miR156i | Cleavage | 5.0 | 8.034 | 1 | 20 |
| Osa01LNT0050500.1 | osa-miR156j-5p | Cleavage | 5.0 | 8.034 | 1 | 20 |
| Osa01LNT0050500.1 | osa-miR166c-5p | Translation | 4.0 | 10.781 | 1 | 20 |
| Osa01LNT0050500.1 | osa-miR395t | Cleavage | 4.5 | 15.749 | 1 | 21 |
| Osa01LNT0050500.1 | osa-miR399k | Translation | 5.0 | 16.567 | 1 | 21 |
| Osa01LNT0050500.1 | osa-miR156k | Cleavage | 4.0 | 8.034 | 1 | 21 |
| Osa01LNT0050500.1 | osa-miR1428b | Translation | 4.5 | 10.976 | 1 | 21 |
| Osa01LNT0050500.1 | osa-miR1428c | Translation | 4.5 | 10.976 | 1 | 21 |
| Osa01LNT0050500.1 | osa-miR1428d | Translation | 4.5 | 10.976 | 1 | 21 |
| Osa01LNT0050500.1 | osa-miR1879 | Cleavage | 4.5 | 16.426 | 1 | 24 |
| Osa01LNT0050500.1 | osa-miR2873a | Cleavage | 4.0 | 15.793 | 1 | 24 |
| Osa01LNT0050500.1 | osa-miR2919 | Cleavage | 3.0 | 2.987 | 1 | 19 |
| Osa01LNT0050500.1 | osa-miR2919 | Cleavage | 4.5 | 14.891 | 1 | 19 |
| Osa01LNT0050500.1 | osa-miR2919 | Cleavage | 4.5 | 7.837 | 1 | 19 |
| Osa01LNT0050500.1 | osa-miR5079a | Cleavage | 3.5 | 15.863 | 1 | 22 |
| Osa01LNT0050500.1 | osa-miR5079a | Translation | 4.5 | 12.544 | 1 | 22 |
| Osa01LNT0050500.1 | osa-miR5079a | Cleavage | 5.0 | 16.255 | 1 | 22 |
| Osa01LNT0050500.1 | osa-miR5146 | Translation | 5.0 | 16.634 | 1 | 24 |
| Osa01LNT0050500.1 | osa-miR5487 | Cleavage | 4.5 | 15.937 | 1 | 21 |
| Osa01LNT0050500.1 | osa-miR5515 | Translation | 5.0 | 15.347 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0050500.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0050500.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RG810 |
| Osa01LNT0050500.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0050500.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG810 | RZ730 |
| Osa01LNT0050500.1 | 1 | qNOP-1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0050500.1 | 1 | qPHT-1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0050500.1 | 1 | qPL-1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0050500.1 | 1 | qSF-1 | Physiological trait | Source activity | RZ730 | RZ538 |
| Osa01LNT0050500.1 | 1 | yd1 | Morphological trait | Seed | C2340 | C86 |
| Osa01LNT0050500.1 | 1 | yd1b | Morphological trait | Seed | C547 | C2340 |
| Osa01LNT0050500.1 | 1 | qNSB1-1 | Morphological trait | Panicle/flower | C86 | C2340 |
| Osa01LNT0050500.1 | 1 | qSSBp1-1 | Morphological trait | Panicle/flower | C86 | C2340 |
| Osa01LNT0050500.1 | 1 | pl1.1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0050500.1 | 1 | qChll1a | Morphological trait | Culm/leaf | C86 | C813 |
| Osa01LNT0050500.1 | 1 | qPHT1-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0050500.1 | 1 | sd-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0050500.1 | 1 | qLVBTS1-1 | Morphological trait | Panicle/flower | C2340 | C86 |
| Osa01LNT0050500.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0050500.1 | 1 | qCTs-1-c | Resistance or Tolerance | Cold tolerance | RM315 | RM472 |
| Osa01LNT0050500.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM543 | RM472 |
| Osa01LNT0050500.1 | 1 | nan | Physiological trait | Eating quality | RM8084 | RM6827 |
| Osa01LNT0050500.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0050500.1 | 1 | qH2O21 | Others | Others | C86 | C813 |
| Osa01LNT0050500.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0050500.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0050500.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0050500.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0050500.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0050500.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0050500.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0050500.1 | 1 | sd1 | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Osa01LNT0050500.1 | 1 | fll1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0050500.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0050500.1 | 1 | nan | Morphological trait | Seed | RZ730 | RZ801 |
| Osa01LNT0050500.1 | 1 | tn1-4 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0050500.1 | 1 | ph1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0050500.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Osa01LNT0050500.1 | 1 | nan | Morphological trait | Root | RZ730 | RZ801 |
| Osa01LNT0050500.1 | 1 | Fh1-2 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)