© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0051300.1
ACAAACAAAACAACAGAACCTACTATTATTACTGAAACTATGATGATACCTTTTTCCAATACAATTCAATTACTCGTACTCCGCAAGATGGGATCAAAATGTTAGCTCATTATACACCGAAGGTTATGTGTGTGGGGGAAAATTTCCTATATCTATGTGCACTGCAGGAGATGCAAACTATGAACAACAAGCACGAGCAAAATAATAATAATAAAAAAAGCCTAAGCATTGAACAGCTTGCGAAATGGCCCGTCCTTCCGATCTTTGGCCGCCTCTGTCAACGCAAGGAACCTCTTGAACCCTGTAGTGGCCGCGCCCCGCCCAAGCGCCGCGGCGCGGGCGAGCACGTCCTCCCGGTTGGCCAGAGCTCCTGTCAAGGTAGCCATGCTTGGTGTGGTCGAAACGGTCGGGGTGGTGACCGGTGCAATGTGGTGGGCGGATGAAGTGGCAACTGGTGGTGCAACTGTTGGAGCAACGGCAGGGTGTTTGATAGCGGGGCTATGCTTGTTGAAGTCCTCCAGTATGGTTTGCTGGTCTGCTTTCTTCAATCCCTTGAGGTCAAGTATCCGTTGGAACTCAAGTGGTGTTCCTTCCGGTAGGAGAGCGCGGTAGGTGTTAGCAACAGAGTCAACTGGTGACAAAATAACCTTTAGGAGTGCTTCAGCTTTACTCATTTCCCGGCTTACAAACTTGGAGTAGCTAGCCGCAGCGGTACTCTGTTTTCCAAGAGATGGGATGTCTAGCAGAATAGTCTTTACAGCTTGAGTGTCCAAAAGCATCTGCTGTGCACCAGTTTCTGATATATGCTTGCACTTGTATATATTGAGATAAAACCGAGGTCCAAGAGAGGCTGCCAATTTGTCCAGGAAATACTGGAAGTAGGTTGGTGAAAGCAGGTTACCGAGCACAGGAATACTGCTGGACAGAATAGAGCTGACACCATTTACGTATTCTGATTGGTCGCCAACACTTTCAAGGGTGGACCATGGCACGCGAGTCATTGCAACCATTTCAGCATCAAATTTGGTTTCAAGGCCATGTACAAGTGTCATCAACGCTTTCATGATCACAGCTGAGAACTCATCCTGAACTTCAGAGATGTCCACTTTGTCAGCAAAGTGGGGGTTAATCATCTTAGCAACATTCTCAGCTAGCTCACCAGATGTCTGGTGACAATATTCTGCAGTGTTAACAATATAGCATATCATTTTCTCATCCCTGTCGGAGGTCCTGATCTGCCCATCAGTACCAGTAGCAGCTGCAACAATCCCAGTTCCACCTTTTGGTAATCTGGCATATAACTTCGATGCATAGGCTTTAAGTACTCTTTGAAATACCTGGAACAAGTTAAATAATGTCTCGTTCTTTGTTAATGCACTGCACCTATTTAAGCTTCTCCTTATTATCAAGAACACCTGCATGCTGCTTGACAGAATATATGTTTGACTCCCTTCCTCTGTCTCCCATTTTTCTTCCTGGATAAGTTTATCTAACTGATCCACTAGAGATTTCTCCTCAAGTTCTATGTACACACTCATGTATGGTTCAAAACAAGATGATATAATTCCATGGAAGTTGAAACCAGCACCAGGAATCGATAAATCTTTCTGCTTGTCTTTGTCATGTCCAATTTCATCATTGGGCACTGCCAGTTTTTTCTCGTATTTCTTCCGTATGTCTGAAACAATTTTATTACGCCCAGTGTCCTCATTTTCATCATCACTCGCTGACTCTTTATTCCGAGTTGTCGTCACCCCACCACTGAATTTCTCTGCTAATTCTTCCTCAAATTCAAGGGTTCTCTGTAATGCCAATAACAAAGTCGCAACGTCTGGCTTTTCTTTCAAATTGTTAAGGATATCAATAAGCTGGGCCCTTGTAATCTTACAGAACTGAATGCACAATAGATAGTCAACATGCCAAGAAGGTGGAAATATTTTCCAGGTATCCTCATTTGATCGTAGACGACGTTTAATCCATGCATATCTCCTTTCGGTCTTATCTAACTTGGCAAGTTCTGCTCCTTCAAAGATCTGCTTATATGAGGTAAGTTCCTTGCTGCAAAAATTCTTAACTAGTTCTTCCCTCACAGAGGGCTCCAAAGCATCAACCACCAAGCAAGCATCAGATAGCTGCTGCAATAGAGTTGCATCCTCAGTTTCCTTCCCAGTTCCTAAGCTTGTAAAATCAGAAAACACATGAGATTTGAGGATTTTCTTGATATTCTTGAATTTCTCTCTGAGCTCTGTTATCTTCGGCACATCCCTATATGCTTCAAAATGACTGCACAACTGGTTTACTGCCTCCAGTTGTGCAGCTGCTTCTTTATACTGACGTTTTGAGGCCATGACCTGAAGTTGCTCGACAGCAGAAACAAGCATAGTAAGACGATGAAGAGCGGTTATTGTAGTTGTTATATGTCTCTTCGCGCAATCCAGCTTTTTTATGTCACGACAGATTTCCTGAACCATTGATTCACTTTGTTCTGCTTTAGTTTTTATCTCGTGTATCTTGTGCATCAGTTCCTGAACAGCATTTGTTGCTGCAGCAAGTTCTTCCTTGGCCTTGGTTCCAGAGTTGCTCTGCTGCCGGACGGCGGCGAGGATGCTGGCGTCCACCCGGCGAATCTCGCTCTGTATCTTCTGCATCAGCGGCTCGACGCCCGATAATGACGCCTCGGTGGGGAACATCTGGTTGATGTACTCGAGGGCGCTGGACTTGTCCATGGCTCCCCGAGATCTCCCCTCCCCCGCGAGCGCCCGCCCGCCCGCCCGCCCCCGGAGGATCTGGAGGGTGGGGCGCGCGCCGCGGCGGAGCCGATCCGGTGGGATTCGTACGGCGGGGAGGAGGTGGCGGCGGGCTGCCCCTCGCGCGCGCGGCGGGAGGTGGAGGAGGAGGGAATCGTCGGCGAGGTGGTCGTCGGCTGCGTCACTTGCCGATTTGGTGTTCACCGGTATCCGGTGGTGGTGAACTGGCAAATCGGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0051300.1 | 1 | 39450806 | A | G |
| Osa01LNT0051300.1 | 1 | 39450811 | A | G |
| Osa01LNT0051300.1 | 1 | 39450874 | A | T |
| Osa01LNT0051300.1 | 1 | 39451775 | A | T |
| Osa01LNT0051300.1 | 1 | 39452878 | T | G |
| Osa01LNT0051300.1 | 1 | 39452957 | G | C |
| Osa01LNT0051300.1 | 1 | 39452959 | C | T |
| Osa01LNT0051300.1 | 1 | 39452978 | A | G |
| Osa01LNT0051300.1 | 1 | 39453249 | A | T |
| Osa01LNT0051300.1 | 1 | 39454015 | A | T |
| Osa01LNT0051300.1 | 1 | 39455602 | A | C |
| Osa01LNT0051300.1 | 1 | 39455639 | G | C |
| Osa01LNT0051300.1 | 1 | 39455770 | C | T |
| Osa01LNT0051300.1 | 1 | 39456104 | A | G |
| Osa01LNT0051300.1 | 1 | 39457077 | G | A |
| Osa01LNT0051300.1 | 1 | 39457918 | C | T |
| Osa01LNT0051300.1 | 1 | 39458160 | C | G |
| Osa01LNT0051300.1 | 1 | 39458179 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0051300.1 | osa-miR169p | Translation | 4.5 | 19.669 | 1 | 22 |
| Osa01LNT0051300.1 | osa-miR418 | Translation | 4.5 | 19.676 | 1 | 21 |
| Osa01LNT0051300.1 | osa-miR426 | Cleavage | 5.0 | 10.725 | 1 | 21 |
| Osa01LNT0051300.1 | osa-miR810a | Cleavage | 5.0 | 22.248 | 1 | 21 |
| Osa01LNT0051300.1 | osa-miR815a | Cleavage | 4.5 | 21.391 | 1 | 21 |
| Osa01LNT0051300.1 | osa-miR815b | Cleavage | 4.5 | 21.391 | 1 | 21 |
| Osa01LNT0051300.1 | osa-miR815c | Cleavage | 4.5 | 21.391 | 1 | 21 |
| Osa01LNT0051300.1 | osa-miR444b.2 | Cleavage | 5.0 | 15.753 | 1 | 21 |
| Osa01LNT0051300.1 | osa-miR444c.2 | Cleavage | 5.0 | 15.753 | 1 | 21 |
| Osa01LNT0051300.1 | osa-miR1850.1 | Cleavage | 5.0 | 13.556 | 1 | 21 |
| Osa01LNT0051300.1 | osa-miR1850.2 | Translation | 4.5 | 9.28 | 1 | 21 |
| Osa01LNT0051300.1 | osa-miR1850.3 | Translation | 5.0 | 22.959 | 1 | 22 |
| Osa01LNT0051300.1 | osa-miR2093-5p | Translation | 5.0 | 13.093 | 1 | 20 |
| Osa01LNT0051300.1 | osa-miR2093-5p | Translation | 5.0 | 14.204 | 1 | 20 |
| Osa01LNT0051300.1 | osa-miR5510 | Translation | 4.5 | 13.943 | 1 | 21 |
| Osa01LNT0051300.1 | osa-miR2275c | Translation | 4.0 | 9.769 | 1 | 23 |
| Osa01LNT0051300.1 | osa-miR5522 | Cleavage | 5.0 | 10.924 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0051300.1 | 1 | qSSBp1-1 | Morphological trait | Panicle/flower | C86 | C2340 |
| Osa01LNT0051300.1 | 1 | pl1.1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0051300.1 | 1 | qChll1a | Morphological trait | Culm/leaf | C86 | C813 |
| Osa01LNT0051300.1 | 1 | qPHT1-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0051300.1 | 1 | sd-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0051300.1 | 1 | qLVBTS1-1 | Morphological trait | Panicle/flower | C2340 | C86 |
| Osa01LNT0051300.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0051300.1 | 1 | qCTs-1-c | Resistance or Tolerance | Cold tolerance | RM315 | RM472 |
| Osa01LNT0051300.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM543 | RM472 |
| Osa01LNT0051300.1 | 1 | nan | Physiological trait | Eating quality | RM8084 | RM6827 |
| Osa01LNT0051300.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0051300.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0051300.1 | 1 | qH2O21 | Others | Others | C86 | C813 |
| Osa01LNT0051300.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0051300.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0051300.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0051300.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0051300.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0051300.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0051300.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0051300.1 | 1 | nan | Morphological trait | Seed | RZ730 | RZ801 |
| Osa01LNT0051300.1 | 1 | tn1-4 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0051300.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG810 | RZ730 |
| Osa01LNT0051300.1 | 1 | nan | Morphological trait | Root | RZ730 | RZ801 |
| Osa01LNT0051300.1 | 1 | Fh1-2 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0051300.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0051300.1 | 1 | fll1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0051300.1 | 1 | ph1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0051300.1 | 1 | sd1 | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Osa01LNT0051300.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Osa01LNT0051300.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RG810 |
| Osa01LNT0051300.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0051300.1 | 1 | qPL-1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0051300.1 | 1 | qNOP-1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0051300.1 | 1 | qPHT-1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0051300.1 | 1 | qSF-1 | Physiological trait | Source activity | RZ730 | RZ538 |
| Osa01LNT0051300.1 | 1 | yd1 | Morphological trait | Seed | C2340 | C86 |
| Osa01LNT0051300.1 | 1 | yd1b | Morphological trait | Seed | C547 | C2340 |
| Osa01LNT0051300.1 | 1 | qNSB1-1 | Morphological trait | Panicle/flower | C86 | C2340 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)