© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0051800.1
GTTCCATCCCCAGAACAATGAAACCGTTCAGCACTCATTCATAAAGAAACTGTGGTATCTACGTTCCAGAATCTTTTCACATAAAGTGTTCCAAAATTATGTTGAAGAGACCATCGTCTCGAATCCTAATATTGTTTCAGATGAGGCTAGGAAATAGCTGCTTCAAAAATATTCTCTCTCTCTCCCGGCGAAAAAAAAAAATTCAGTTACCTATGACTAACAATCTAACACAGACTAGTGTTATCTCGTATCAATTGGTTGCAGGGTGTTTCGCCTTTGAATGATCCTTCAGAGCACCAGAGGAGTTGAAAGTCTTTTTGCATGAGTTGCAGACATAGCTAGCAGAACGCTTAGGCGTGTCGTTCTTTATGGGCGTCCTCTTTGCCTGTTTTGCTGGGTGAGGGTTTGTAACTTGAAGATGACTACCTCTCTTGCTAGTATTAGTACCAGTTTTGTTGTCCGTAATTGGTGCTTCTATCTTTGCCATCTCATGTGGAAATGTCTTCAAGGGTGTTACCACTGGTTCATTTTCCTCTTTAGTATTCTTTGCAGGAGTCTCTTCTTCATCAGAACTCTCACCTTCCTTTGCAGGAGTCTCTTTTTCATCAGTACTCTCACCTTCCTTTGCAGTAGTCTCTTCTTCATCAGAACTCTTACCTTCATAATCAGCATCATCACTTGAATCCTCATTACCAGTAGATTCACCAACTACTGAAATATCACGGTATCGTTCATTGTTGTCATCATCAGCTTTTGATTTCTCATAGTGCTCTATTTCCTTTACAAAAGCCTTTTGCATGGCGGATGCAACTGTAGCAGACTTTGCAGGAAGTTTACTTTTCTGTGCTTCTTTGATCATATTATCTGGTGGAACCTCCTCATCAGATTCATCACCTTCAGAATCAGTGAATTTTCCCAAATTCTTTACTTGATAGCCACAAAAGGCAACTTTGCTGATTAGTGAGGTGTGGAATAGTTGAAAGTTCTTCTTGAAACAGAAGTCAACCTTGATATGCGGATGCCTTTTGGAGGAAAGCGTCCCAATCGCAAACTTCTCATCATTAACTTCGACAAATACTTTCACATTGGAGTCTTTTAGCCCGTAAGCCTCATCAAGGGCTACCGATGTTAGATGATACAGGGTATCCTCAGGACAAAAGATCTCCTTCTTATTGCACGGCTCAATTACCACTCCCCAAAAATCGACGTCCATTGCTGCTTTTGTTATTTTCTTCCCGAGCTTTTAGAGATTTGGCTGGAGGCAGCGCCACGGAGGGAGGTCAAGCGGTGGGCGGCGGCGAGATCCGGCCCGGCCTCGCCGCTCGCCGGCGCCCGCTGTGGTGAAGGGGTGAGGAGAGAAGAAAAAAAAAATGGTGAAGTGAGGAAGAAGAAAGGGGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0051800.1 | 1 | 39629407 | A | G |
| Osa01LNT0051800.1 | 1 | 39631153 | G | C |
| Osa01LNT0051800.1 | 1 | 39616442 | T | A |
| Osa01LNT0051800.1 | 1 | 39617093 | A | T |
| Osa01LNT0051800.1 | 1 | 39617231 | T | C |
| Osa01LNT0051800.1 | 1 | 39617298 | A | C |
| Osa01LNT0051800.1 | 1 | 39618643 | A | G |
| Osa01LNT0051800.1 | 1 | 39619463 | T | C |
| Osa01LNT0051800.1 | 1 | 39619811 | A | C |
| Osa01LNT0051800.1 | 1 | 39619919 | A | G |
| Osa01LNT0051800.1 | 1 | 39620146 | T | G |
| Osa01LNT0051800.1 | 1 | 39620501 | A | G |
| Osa01LNT0051800.1 | 1 | 39620806 | C | T |
| Osa01LNT0051800.1 | 1 | 39621486 | G | A |
| Osa01LNT0051800.1 | 1 | 39621602 | T | G |
| Osa01LNT0051800.1 | 1 | 39621756 | C | T |
| Osa01LNT0051800.1 | 1 | 39621817 | A | G |
| Osa01LNT0051800.1 | 1 | 39622335 | A | G |
| Osa01LNT0051800.1 | 1 | 39622533 | G | A |
| Osa01LNT0051800.1 | 1 | 39623721 | A | G |
| Osa01LNT0051800.1 | 1 | 39624003 | A | G |
| Osa01LNT0051800.1 | 1 | 39624225 | A | G |
| Osa01LNT0051800.1 | 1 | 39624302 | A | G |
| Osa01LNT0051800.1 | 1 | 39624744 | T | C |
| Osa01LNT0051800.1 | 1 | 39625509 | A | G |
| Osa01LNT0051800.1 | 1 | 39625870 | G | A |
| Osa01LNT0051800.1 | 1 | 39625885 | A | G |
| Osa01LNT0051800.1 | 1 | 39625890 | A | G |
| Osa01LNT0051800.1 | 1 | 39626355 | G | A |
| Osa01LNT0051800.1 | 1 | 39626926 | A | G |
| Osa01LNT0051800.1 | 1 | 39627401 | A | G |
| Osa01LNT0051800.1 | 1 | 39627560 | A | G |
| Osa01LNT0051800.1 | 1 | 39627905 | C | T |
| Osa01LNT0051800.1 | 1 | 39627966 | G | A |
| Osa01LNT0051800.1 | 1 | 39628061 | T | C |
| Osa01LNT0051800.1 | 1 | 39628337 | A | G |
| Osa01LNT0051800.1 | 1 | 39628628 | T | C |
| Osa01LNT0051800.1 | 1 | 39628840 | A | G |
| Osa01LNT0051800.1 | 1 | 39629889 | T | G |
| Osa01LNT0051800.1 | 1 | 39630343 | T | C |
| Osa01LNT0051800.1 | 1 | 39631545 | A | G |
| Osa01LNT0051800.1 | 1 | 39631719 | A | G |
| Osa01LNT0051800.1 | 1 | 39632456 | T | C |
| Osa01LNT0051800.1 | 1 | 39632945 | A | G |
| Osa01LNT0051800.1 | 1 | 39631171 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0051800.1 | osa-miR1440b | Cleavage | 4.0 | 14.443 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR171a | Cleavage | 3.5 | 8.766 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR395b | Cleavage | 4.5 | 10.539 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR395d | Cleavage | 4.5 | 10.539 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR395e | Cleavage | 4.5 | 10.539 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR395g | Cleavage | 4.5 | 10.539 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR395h | Cleavage | 4.5 | 10.539 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR395i | Cleavage | 4.5 | 10.539 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR395j | Cleavage | 4.5 | 10.539 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR395k | Cleavage | 4.5 | 10.539 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR395l | Cleavage | 4.5 | 10.539 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR395s | Cleavage | 4.5 | 10.539 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR395t | Cleavage | 4.0 | 10.539 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR395u | Cleavage | 4.5 | 10.539 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR171b | Cleavage | 2.5 | 8.766 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR171c-3p | Cleavage | 2.5 | 8.766 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR171d-3p | Cleavage | 2.5 | 8.766 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR171e-3p | Cleavage | 2.5 | 8.766 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR171f-3p | Cleavage | 2.5 | 8.766 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR395m | Cleavage | 4.5 | 10.539 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR395n | Cleavage | 4.5 | 10.539 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR395p | Cleavage | 4.5 | 10.539 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR395q | Cleavage | 4.5 | 10.539 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR395v | Cleavage | 5.0 | 10.539 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR395r | Cleavage | 4.5 | 10.539 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR1430 | Cleavage | 3.5 | 20.284 | 1 | 21 |
| Osa01LNT0051800.1 | osa-miR2093-3p | Cleavage | 5.0 | 21.245 | 1 | 20 |
| Osa01LNT0051800.1 | osa-miR395y | Cleavage | 4.5 | 10.539 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0051800.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0051800.1 | 1 | FSM | Morphological trait | Shoot/Seedling | nan | nan |
| Osa01LNT0051800.1 | 1 | rrw1b | Resistance or Tolerance | Other soil stress tolerance | C86 | RG236 |
| Osa01LNT0051800.1 | 1 | qCTs-1-c | Resistance or Tolerance | Cold tolerance | RM315 | RM472 |
| Osa01LNT0051800.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM543 | RM472 |
| Osa01LNT0051800.1 | 1 | nan | Physiological trait | Eating quality | RM8084 | RM6827 |
| Osa01LNT0051800.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0051800.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0051800.1 | 1 | qRNd1 | Resistance or Tolerance | Other soil stress tolerance | RG236 | C86 |
| Osa01LNT0051800.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0051800.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0051800.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0051800.1 | 1 | Fh1-2 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0051800.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0051800.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0051800.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0051800.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0051800.1 | 1 | nan | Morphological trait | Seed | RZ730 | RZ801 |
| Osa01LNT0051800.1 | 1 | nan | Morphological trait | Root | RZ730 | RZ801 |
| Osa01LNT0051800.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Osa01LNT0051800.1 | 1 | tn1-4 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0051800.1 | 1 | fll1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0051800.1 | 1 | ph1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0051800.1 | 1 | sd1 | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Osa01LNT0051800.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | C86 | RZ14 |
| Osa01LNT0051800.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0051800.1 | 1 | qNOP-1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0051800.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RG810 |
| Osa01LNT0051800.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0051800.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG810 | RZ730 |
| Osa01LNT0051800.1 | 1 | qPHT-1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0051800.1 | 1 | qPL-1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0051800.1 | 1 | qPH1-1 | Morphological trait | Shoot/Seedling | C86 | RG236 |
| Osa01LNT0051800.1 | 1 | yd1b | Morphological trait | Seed | C547 | C2340 |
| Osa01LNT0051800.1 | 1 | pl1.1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0051800.1 | 1 | qPHT1-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0051800.1 | 1 | sd-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0051800.1 | 1 | qRIE 1 | Resistance or Tolerance | Submergency tolerance | C86 | G54 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)