© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0052700.1
GTTACCGAGGGAGTATCTACGTAGATCGGTCACCTCAGAGAGATTTTACAACCTGTAGTTTTGAACTTTTGACCTGAAGTAGGCAGGTGCTTACGCATGCTTTACCACGAGAAACTTGGTTGGACCAGGTTCGGCACCTTATCATGCCAGCATTAATTTTGGTCGTTGGAAGGAAGCTGCATGTTTTTACTTGTGAACAGAAAACAATGATTGTGACGTGACGGCCAGACTCAGTTGCACTGCACCGCCTTTTGTTGTCCATTTTAACTTCACCATGCTAAGATACACCTCCGGAATAGAGCTCTCAACTAATCCATGCAATTATACAACATGTAATGCAGATAAAAAGGATGATCATCAGATTGAGTTCGTCCACAGGCCACAGTACCTTGCAACCTGACATGAATGCACATTTGAAATGAAACAACACCGCAGTGCAAAGCAGGCTGAAAACAAGAAAGTTTTAAACGTCATTTCGCTTCCCAAAGATCTGCATTAACAAAAAATAAACTGTACATCTCCGGTAGCAACTCAATTTACAGAACTTTGATTCCGGGGAGTTAGGAGGGGGTGGCAACATTCACACAGCGCCTGAGACGGGCGTGCGATGGACTTTTTTATACATCACGGTGGTTTGGGTCACAACTGCCAGGACGCCGCCTTAGGAAGTGTACGCGGATGCGGATGGGGATTGCAGGAGACGCCGAACCATAGGTACATTAGTTGAAGCAGAGCCGTAGGCATACACTCCCATTGGAGGAGCCATCGTTGGATGGTCAAATTTGCAATTCGCGCCGAACTTGCAGATGCCATAGCGAGAATAGAACTTGCACAGTTCTTCTCCCGGACGTAGTGGAAGACCCACTGGACTCAAGACACAATCTGGAGTAGGCATTGATCGCACCCGGGGATGATGGAACTTGCACACCGCACCAAATTTACAGTCTCCAGTCTTCATGTAGTATTGACATTCTGGTTGATCAGGTCTCTCAGGAAATACATTCTCTCTCTGCAATGCGTATTGAGGTACAGGATATGAACTAGATCTGTAGGGTGACAACATTCCCTGATTGCCTGCACTGGCATCAACTTGCTGAGAAGTTCCATAGGTTTGTTGAGCCCCTGGGGACTGCAGTCGACTCTCAGAAGATGAAACAGGCATCATTTGGCCAGTATATGAGTTCCAGCTTGGTACTTGAACAAGACCTTGCGGTACAATCATCGGTGCATAATTTGAGGGATTCTGCCATCTAGGGCTTGGAATAAAAGAACCTCTTGGAAAAGCCCAGCTAGCCATTGTTCCAGTATAAGGTGGACCCGCGGTTGCAGAGGAATGTACAGAAGGATAAATAGGTGAACCACGTGAAGAAGCCATAGCATTGAAAAGTTCTGGATGGTGAAATTTACATGTATTCCCATATTTACACTGTCCTGTTTTTAAGTAATATGCACACTCCTTTTCACTCGGTCGGAGTGGATATCCTAATGTGTTTAGCTGCACCCTCCCTGCAATTCCAGCTTTTTCTCTGGGATGATGGAATTTGCATGTAGGCCCAAACTTGCATGTTCCAGTCTTCAGATAATACTGACATTCTGGTTGCCCCATCCTCTCAGGGTATTCTCCTTTCATTCTGGCAGAGGCAATAGCCTAACATTAAACAGATCCAATCTAACTTGAGAATAAAAACATGAGGTATGAAGAAAAGATAAAACGATCAGAATTGAATATAAGATATAATTTACAGAAAAATGGTAGTCACTAATTTAAATCTGTAATGCATCACTCGGCCTATGCCTGCTGGTGGCAATTGTCCAAAGGAGAATGGGTCTCTGCTTATCATGAAACATGGGTTACATTACATACAGCTGAACATGCTCCATTGCGTAGTCCTTCCCCAGTTTCAGCCTATTCTTCTAAACTACAACCTAATGATGACATCCTGACTGAGATTACCCCATGAATCAGTGTGATAAGAAACAATAATGCTACATAAGAACAGTTGGGTCAAGTATCTATTCACCAGATTCCTATCCTGAGGATGATTGAACCTGCAGCTCATACCGAACCTGCACAATCCAGTCCTGAGGTAGTAAGTGCAGTCCGGTTCTCCGGACCGCTCAGGATATGGTCCAGGTTGCATAGCGCCACTGCCGCTCATGGTCATCTGCTGCCACATACCCTCTCCATAGAGAGCGGCGGGGTCGTGGGAAGGCTCGTCCGTGGCGGCGGCGGTGGCGGGGAGCTGCGAGGGAGGGGGGGGAGGCGGAGGAGGAGGAAGAGGAGGCGTGGGGGCGGCGGCGGAGGCCGTCACCGTCACCACCGCTGGAGCGGAGGCCCTTCCGGCGTCGTCCATCGGCGGCGAGCTGCGGCGCGGGCCATCACGCGATCGCCGCGGCGGCGGCGGCGACGCGGGATGCCATCCTCGGAGCTCCGGCGACGGGCGGTGGCGGCGGCGGTGGAGGTGGGGGGCGGGTGATCGGTGGCGCGGCGGTGAGGAGGTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0052700.1 | 1 | 40006560 | A | C |
| Osa01LNT0052700.1 | 1 | 40006997 | T | C |
| Osa01LNT0052700.1 | 1 | 40007837 | T | A |
| Osa01LNT0052700.1 | 1 | 40008103 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0052700.1 | osa-miR396a-3p | Translation | 3.0 | 24.029 | 1 | 20 |
| Osa01LNT0052700.1 | osa-miR396b-3p | Translation | 3.0 | 24.029 | 1 | 20 |
| Osa01LNT0052700.1 | osa-miR444a-3p.2 | Translation | 5.0 | 22.991 | 1 | 21 |
| Osa01LNT0052700.1 | osa-miR818a | Translation | 4.0 | 21.717 | 1 | 22 |
| Osa01LNT0052700.1 | osa-miR818b | Translation | 4.0 | 21.717 | 1 | 22 |
| Osa01LNT0052700.1 | osa-miR818c | Translation | 4.0 | 21.717 | 1 | 22 |
| Osa01LNT0052700.1 | osa-miR818d | Translation | 4.0 | 21.717 | 1 | 22 |
| Osa01LNT0052700.1 | osa-miR818e | Translation | 4.0 | 21.717 | 1 | 22 |
| Osa01LNT0052700.1 | osa-miR444d.2 | Translation | 5.0 | 22.991 | 1 | 21 |
| Osa01LNT0052700.1 | osa-miR444e | Translation | 5.0 | 22.991 | 1 | 21 |
| Osa01LNT0052700.1 | osa-miR444f | Translation | 5.0 | 22.991 | 1 | 21 |
| Osa01LNT0052700.1 | osa-miR1853-3p | Translation | 4.5 | 14.287 | 1 | 22 |
| Osa01LNT0052700.1 | osa-miR2118c | Cleavage | 4.5 | 18.932 | 1 | 22 |
| Osa01LNT0052700.1 | osa-miR2118q | Cleavage | 4.5 | 18.932 | 1 | 22 |
| Osa01LNT0052700.1 | osa-miR2866 | Cleavage | 4.5 | 19.18 | 1 | 20 |
| Osa01LNT0052700.1 | osa-miR5080 | Translation | 5.0 | 23.496 | 1 | 21 |
| Osa01LNT0052700.1 | osa-miR5515 | Cleavage | 3.5 | 19.746 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0052700.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RG810 |
| Osa01LNT0052700.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0052700.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG810 | RZ730 |
| Osa01LNT0052700.1 | 1 | qNOP-1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0052700.1 | 1 | qPHT-1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0052700.1 | 1 | qPL-1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0052700.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | C86 | RZ14 |
| Osa01LNT0052700.1 | 1 | yd1b | Morphological trait | Seed | C547 | C2340 |
| Osa01LNT0052700.1 | 1 | qPH1-1 | Morphological trait | Shoot/Seedling | C86 | RG236 |
| Osa01LNT0052700.1 | 1 | pl1.1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0052700.1 | 1 | qPHT1-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0052700.1 | 1 | sd-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0052700.1 | 1 | qRIE 1 | Resistance or Tolerance | Submergency tolerance | C86 | G54 |
| Osa01LNT0052700.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0052700.1 | 1 | FSM | Morphological trait | Shoot/Seedling | nan | nan |
| Osa01LNT0052700.1 | 1 | rrw1b | Resistance or Tolerance | Other soil stress tolerance | C86 | RG236 |
| Osa01LNT0052700.1 | 1 | nan | Physiological trait | Eating quality | RM8084 | RM6827 |
| Osa01LNT0052700.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0052700.1 | 1 | qRNd1 | Resistance or Tolerance | Other soil stress tolerance | RG236 | C86 |
| Osa01LNT0052700.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0052700.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0052700.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0052700.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0052700.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0052700.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0052700.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0052700.1 | 1 | nan | Morphological trait | Root | RZ730 | RZ801 |
| Osa01LNT0052700.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0052700.1 | 1 | nan | Morphological trait | Seed | RZ730 | RZ801 |
| Osa01LNT0052700.1 | 1 | sd1 | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Osa01LNT0052700.1 | 1 | tn1-4 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0052700.1 | 1 | fll1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0052700.1 | 1 | ph1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0052700.1 | 1 | Fh1-2 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0052700.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)