© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0003700.1
CTCTAGAGATTTTGTTAACATCCCAAACCGTTCCCTGTCAATGGCAGCGGTTAAACTGTTGGAACAGGAATTTTGTAGGATCGATTTCGCACAATTCCTTCTTTTACTCCAAAGGAGGCAACGAGCTCAACCGAGCAAGGGCCCCAAAGCATGGGCTTTATTTGGGCTAACATAGGCCAAGAGCCCAAGACCCAATAAAACCTAAACTTTTTCACGAGACAGCCACCTCTTAACCATCTATGACTTGGTAGCGGCCCTTTCTGAACCTCCCGCTTACGCATTCAAGCTCCACGACTGCTTCTTCAGACATTTATTTACATGGCTGAGGCGCACAAAGAATGAAACAACTTAATTGGGTCTAAATACTAACAAATTTGAGGACCATATTGTTGTTTGTCCTCGCGTGTCCTATGCAGCAGCCGACTTGCAAATTGGGCATGAGTTCTTCTCCTTCAACCACTTCTTGACGCAGTCGGTGTGGAAGTCGTGATTGCATTTCAGTATTCCCAGCAAACTGTTGTCTTTGTATTCCTCCAGACAAATTGCACATTTCCCATCATCTTGATCATTTTGCTGTTCATCAGAACTGCAATAGATCACTTCTCTCACACAACCTGAGATTTTCTCGTCCACCAAGCCTGTGCAGACATTACCAATAGATTCTCCCAAAGCCAGCAGGTCCTCATAACTCATATTGTCAATGTCCAGTCTCATGGCCCTGTGGGGGTCTTGTGCTTCTCTTGATTCGCGGAGAGCAAATTGTTGCATCATTATCAATTGCTGTGCATCAATCATCAAAGGCTGAATACCATAGTATGAGCTTCTCGCCCTTCTGTTCCTTCCGCTGTTAGCATGCCCTATGAGTACATTCCTTGCATGTCTAGAAGATGCAACAGCTCTGACAGGTAATGGCTGACTGGCCCTCATGGGTGTTGAGGTAGTTGCAGAGGTAGCAGGTTGGTAGCTCGGAATGATCACCTCATGGGGAATCGCTGTAGAGCTAGAGGATGCTACAGAAGGCAGATGAATGTAGCTAGGAACAGTGTCACCATGAACATGCCTAGGTGCAAAGACACCACTGGCAAATATTGCACTGCTTGAAGAGCCTTGTAAAGTTGGGACAGGAACAGATGAGTTGCTGCTTCCCATAGTGTAAGGCATTTCTCCAGAGTGCATTCCAGAGGCACCTGAAGGCATAGTTCTCATTCGCGTAGAAAAGGATGGTCCATTCCTTTTCATTGATGTACTTTGGGAAACATTCGAAGTAGAATGGACTGGTCTAGGTTCCAATGAAATATTATTAAAATTATGACGTGCCCTCACATTTCTCTGACTTCCTTCTTGATTTACCAAGCTCTGGTCATTCCAATTAATTGGGCCAACACTTGGAGGCATTTGACGATGCAAGGACTCAGAAAATGGAGCTGGCTGTGGATAATTAGAGAACTGGGTACTTGATGAGCTACCGGCACAATAACCATCACCATTGATGCTATACTCTGGATAAATGACAGGATTTTTTCGTTTCACTGCAGCAGTTCTGTTGTCGATTTGGGAACTCCCTCGAGCAAATTCTCCCTCAGATCTATGTGGATAAGTTATAACAGGTTCAGTTTGAGGATTGTAGGATACATGGCCACCAGAGCTTCCAGCAGGATAGTGAACATAGGAGTTATGTAAGGTTCCTGTGTTTTTAACTCTATGACCTGAATATTGTGCCACTCGACTTGAAGATGGAAGATCATTCGATCTAATTGCCACATTCCCATGGTATGAAGGGCCAATTTTAAGGGCTGCATCATTTCCAGCATGCACAAATAACTTCTGACCTAAAGGCAGAGGTTGGTTGAGTTGCTCATTATTGGGTTGAACCATCTCTGGCAGTAGGGAATGGTTTCCATGGTGTCTAGCCATAAAACAGTCAGTCCAGTATGCCTGTCCTTAACCTGCTCACAAGTCGTCGTTCGCTCGCTCGATCGATCGATCGATCCACCGATCCAAACCCCACGCGACCGAATAAATTTCCAAGGGAGTAGATAGATAGAGGGGGAAAGGAAGGAGGCGCCCGCGATACGGAAGCTTCGGGGAGAAGATAGGAGGAGACGCGACGCACGCGGCCACAGTTTTCTCCTAAAATTAAAATTCTCTCTCTCTCTCTCTCTCGTAGAGTATTTGTCTGTGCGGTGTGGAGTA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0003700.1 | 1 | 3101817 | C | A |
| Osa01LNT0003700.1 | 1 | 3101622 | G | T |
| Osa01LNT0003700.1 | 1 | 3100704 | T | A |
| Osa01LNT0003700.1 | 1 | 3100938 | T | G |
| Osa01LNT0003700.1 | 1 | 3101057 | A | G |
| Osa01LNT0003700.1 | 1 | 3101159 | T | A |
| Osa01LNT0003700.1 | 1 | 3101853 | C | T |
| Osa01LNT0003700.1 | 1 | 3103143 | A | C |
| Osa01LNT0003700.1 | 1 | 3103802 | C | T |
| Osa01LNT0003700.1 | 1 | 3103936 | T | G |
| Osa01LNT0003700.1 | 1 | 3104132 | C | T |
| Osa01LNT0003700.1 | 1 | 3100293 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0003700.1 | osa-miR5540 | Cleavage | 3.5 | 16.075 | 1 | 21 |
| Osa01LNT0003700.1 | osa-miR5827 | Cleavage | 4.0 | 15.202 | 1 | 21 |
| Osa01LNT0003700.1 | osa-miR5827 | Translation | 4.5 | 13.884 | 1 | 21 |
| Osa01LNT0003700.1 | osa-miR7693-3p | Cleavage | 4.5 | 21.229 | 1 | 22 |
| Osa01LNT0003700.1 | osa-miR395f | Cleavage | 4.5 | 10.414 | 1 | 21 |
| Osa01LNT0003700.1 | osa-miR416 | Translation | 4.5 | 21.595 | 1 | 21 |
| Osa01LNT0003700.1 | osa-miR437 | Cleavage | 4.0 | 10.848 | 1 | 21 |
| Osa01LNT0003700.1 | osa-miR817 | Translation | 5.0 | 18.681 | 1 | 21 |
| Osa01LNT0003700.1 | osa-miR1320-5p | Cleavage | 4.0 | 15.01 | 1 | 21 |
| Osa01LNT0003700.1 | osa-miR1320-5p | Cleavage | 5.0 | 18.665 | 1 | 21 |
| Osa01LNT0003700.1 | osa-miR2094-3p | Translation | 5.0 | 17.82 | 1 | 22 |
| Osa01LNT0003700.1 | osa-miR2863b | Cleavage | 5.0 | 14.16 | 1 | 21 |
| Osa01LNT0003700.1 | osa-miR2921 | Translation | 4.5 | 20.271 | 1 | 24 |
| Osa01LNT0003700.1 | osa-miR2928 | Cleavage | 4.0 | 12.491 | 1 | 20 |
| Osa01LNT0003700.1 | osa-miR812n-5p | Translation | 5.0 | 20.143 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0003700.1 | 1 | gp1a | Morphological trait | Panicle/flower | RM1 | R753 |
| Osa01LNT0003700.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Osa01LNT0003700.1 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0003700.1 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)