© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0056000.1
GCAGAAAAATATCCTGTAAATATATGATACAACAGCTGTGATCTTACTGAACAAACAAAGCTCATAGGGGCAGTCATCCATACCTCATGTCATAACAGTAGTGAGCTATTTGCCTGATGGTGGGATGAGATTACAAGGCTAACAAAAGATTAGCCTCTCTAATTGGTTGTCGATCCCTTAACTGCACTTCAAGTAATAAATGATATTTTTAGACTCTTCAATGATGCCCCAACTGTACACTGTAATTTCCTTCTGAGTTTCGCACCTGCTTGCTAGTATACAAGATAACCAGAATAAGTCCTTCAGTTTGTCACCTTTCAAAGAATTGTCTCCTCATGGTACCGCAGATTTCATCCGCCACAGCAGCATTTTCACGTAGGAATTTCTCAGCTTCTGCCTTGTTTGGAAGGAACTCACCATTGATCCAATACCCAGAATCATCCTTCATAATAACCCCAAGGGAAGAAGCCAGCTCCAGGATCTCTGATTCGTAGCAGATCCCCTTCCCAAATCTGATGTCAATGCCAGCTTCCTTCAGAGTTGCTGGAGCTAATTTGTTCTTGATTATCTGCACTGATATACCGATGCCAGTAGCCTGGGCCTCATTGTAGCGTAATTCCCTTCTTGAAGTCCTCATTCTGACTGCAGCATAGAATCCTAATGCATTGCCGCCACAAGCTACCTCCTTGAAGATTCCAGGAGTCTGATTTGAGCTCAACTTTGTTCTAACCTGATTAACAAAAATAATCAGCGTTTCAGAGCGACTTAGTGTGTGCTGAATTTTTCGAAGTGCCCGAGTCATCAAGCGGGACTGCACATCTTCAGAATTCATATATATTTCACCTTCAAGTTCACATCTGGGAATAAGTGCTGCAACACTATCGACAACAACAACATCAATTGATCCACCAACAAGAGTGTTCACTATGCTCAAAGAATTTTCAGCAGAGTCAGGTTGGGCTATCAGGAGCTTTTCAACGTTTACACCAATGGCTTCGGCAACAGAAGGGTTAAAAGCATTTTCTGCATCAATATAAGCACAGCAGCCTCCTTTCTTTTGCGCTTCCTTGACAACATGAAGGGCGAGTGTTGTCTTCCCAGAGGCCTCTTTTCCAAATAATTCAACCATTCTACCCTGTTAAATATCTACAATAATTTTCAAACAGCACAACTAAAAGCAGTGTTCAAAACAGTATGCCACTACACTCACTGATCATATCAATCAAGGTAAGCCTGCAGTTTTAACTCTAAACATATATGCTATCAAGAAAAAAAAAAGGATGGATGATATGGACACATTTGACAGAAGTAAAGCTAAGCAAGATATGGGCATCAGTTCTACCTATAAATATATTTCCTAATCAGAAATACCATAGACAAAATGCAATTTTTTGTTGTCCAGCAAGAAGGAAAATACTGCCATCAACAAATAGTATTTTCACAACTAAAGAAGAGGGCTTTTGGCACTAATTTAACTAGTTCAACACATCATGGAGATTTCATTGGATTAACACAAAAGGGAAATTAGACATCAAAAGATGAAAAGCCCCACATGACACATTTGACTTTTAGAGTTCCCATTGCAACAAAATAGTGAACTAAGGCCGTGTTTAGTTTCCCCCCTATTCCCAACTTTCCATCACATCATACCACATCAAAAACTTTCCTACACACATAAACTTCCAACTTTTTTTCCAAACTCCCAACTTTCTTCAAACTTCCAACTTTTTTCAGGAACTAAACACACCCTAACTGAACAATAACACCATGCAGAAGACTTATTTGAACTTTGATCCTTATGTGTTATATCAGAAATATATGATTTAGGACCAAGGTAATATCATATGGAATGATATAGTGATAAAGAGTAATGATATCATTGGAATACTAAATATCTAGAATTCTAGATCTGGACAATATGAAAGCACATCATGACCTTTGGTAATCCACCAATGCCAAGAGCAATATCAAGCTTAAGAGAACCAGTGGAGATCACAGGTGTGCGCCTTGTGCGGGAGAACCGCTCCAAACATAAATTAGATTCTCTATCAAAATCACTTGCGAGTTGAGAGACAGCGACACTTAGTGTCGACTCTTTCTCGAGAACTTTTACACCATCGAGTGGGGGATCAGTCTCATAGTCTAATTGCACATCAACTGAAAAGAATCATATCATTAGAAGGAAAAAAGAAATGAAATGTTTGTACGGCAGAAACTGTGAGTATTGATAATAAGTGGACAAACATTGAGCATACCTGAGGTTGACATCGAACAACTTTTTGATAAGAACCAACAAAATCTGTCGTTTATCCAATTCTGGAGGGGAAAGCGGCGGAGAGGAGAGGACACGGGAGGCGCGCCATTACAGAAGCCCGCGCCGGAGAGGTTGGCACGGGCGGCAGATCTCCGGAGGAGAGCGGAGGAGGCTACGAGAGCTCGCATGGAGGCTGGGCAGGGAAGCGCACACGGCTGGGCGGCGGGGCAGTCGCAAGCGAAGGGGGCGGGGGCGCCGCCGCGCCGGGAGCAGGCGCCGCCGGTGGTGGAGGATTCGAACGCGCCGCCACACGCGAAGCCGTTGCAAGCGGGAGGGGAAGAACCCGCCGTCGCGTACTCGCGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0056000.1 | 1 | 41542101 | A | G |
| Osa01LNT0056000.1 | 1 | 41542714 | G | A |
| Osa01LNT0056000.1 | 1 | 41542968 | G | A |
| Osa01LNT0056000.1 | 1 | 41544442 | C | T |
| Osa01LNT0056000.1 | 1 | 41544504 | T | G |
| Osa01LNT0056000.1 | 1 | 41545000 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0056000.1 | osa-miR5543 | Cleavage | 5.0 | 21.528 | 1 | 21 |
| Osa01LNT0056000.1 | osa-miR5827 | Cleavage | 3.5 | 10.014 | 1 | 21 |
| Osa01LNT0056000.1 | osa-miR6253 | Translation | 3.5 | 1.237 | 1 | 22 |
| Osa01LNT0056000.1 | osa-miR6253 | Translation | 5.0 | 14.882 | 1 | 22 |
| Osa01LNT0056000.1 | osa-miR6253 | Translation | 5.0 | 5.248 | 1 | 22 |
| Osa01LNT0056000.1 | osa-miR395f | Cleavage | 5.0 | 10.928 | 1 | 21 |
| Osa01LNT0056000.1 | osa-miR159e | Translation | 5.0 | 13.37 | 1 | 21 |
| Osa01LNT0056000.1 | osa-miR167h-3p | Translation | 3.0 | 19.849 | 1 | 21 |
| Osa01LNT0056000.1 | osa-miR169d | Cleavage | 5.0 | 19.463 | 1 | 21 |
| Osa01LNT0056000.1 | osa-miR419 | Translation | 4.5 | 14.163 | 1 | 21 |
| Osa01LNT0056000.1 | osa-miR396e-5p | Translation | 4.5 | 17.989 | 1 | 21 |
| Osa01LNT0056000.1 | osa-miR1847.1 | Cleavage | 3.5 | 7.622 | 1 | 21 |
| Osa01LNT0056000.1 | osa-miR1850.1 | Cleavage | 2.5 | 1.269 | 1 | 21 |
| Osa01LNT0056000.1 | osa-miR1850.1 | Cleavage | 3.0 | 6.286 | 1 | 21 |
| Osa01LNT0056000.1 | osa-miR1850.1 | Cleavage | 4.0 | 5.089 | 1 | 21 |
| Osa01LNT0056000.1 | osa-miR1850.1 | Cleavage | 5.0 | 1.108 | 1 | 21 |
| Osa01LNT0056000.1 | osa-miR2096-5p | Cleavage | 4.5 | 19.137 | 1 | 21 |
| Osa01LNT0056000.1 | osa-miR396f-5p | Translation | 3.0 | 17.961 | 1 | 22 |
| Osa01LNT0056000.1 | osa-miR2120 | Translation | 5.0 | 15.537 | 1 | 24 |
| Osa01LNT0056000.1 | osa-miR396g | Translation | 4.5 | 17.989 | 1 | 21 |
| Osa01LNT0056000.1 | osa-miR396h | Translation | 4.5 | 17.989 | 1 | 21 |
| Osa01LNT0056000.1 | osa-miR396d | Translation | 4.5 | 17.989 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0056000.1 | 1 | FSM | Morphological trait | Shoot/Seedling | nan | nan |
| Osa01LNT0056000.1 | 1 | rrw1b | Resistance or Tolerance | Other soil stress tolerance | C86 | RG236 |
| Osa01LNT0056000.1 | 1 | nan | Morphological trait | Root | RG109 | RM104 |
| Osa01LNT0056000.1 | 1 | grl1-1 | Morphological trait | Seed | RM431 | RM104 |
| Osa01LNT0056000.1 | 1 | qRNd1 | Resistance or Tolerance | Other soil stress tolerance | RG236 | C86 |
| Osa01LNT0056000.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056000.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056000.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056000.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056000.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056000.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056000.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056000.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056000.1 | 1 | nan | Morphological trait | Seed | RZ730 | RZ801 |
| Osa01LNT0056000.1 | 1 | fll1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0056000.1 | 1 | tn1-4 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0056000.1 | 1 | sd1 | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Osa01LNT0056000.1 | 1 | ph1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0056000.1 | 1 | nan | Resistance or Tolerance | Other disease resistance | RG109 | RG236 |
| Osa01LNT0056000.1 | 1 | Fh1-2 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0056000.1 | 1 | nan | Morphological trait | Root | RZ730 | RZ801 |
| Osa01LNT0056000.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Osa01LNT0056000.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ14 | R117 |
| Osa01LNT0056000.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG810 | RZ730 |
| Osa01LNT0056000.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RG810 |
| Osa01LNT0056000.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0056000.1 | 1 | qPHT-1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0056000.1 | 1 | qNOP-1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0056000.1 | 1 | qPL-1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0056000.1 | 1 | qPH1-1 | Morphological trait | Shoot/Seedling | C86 | RG236 |
| Osa01LNT0056000.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ14 | R117 |
| Osa01LNT0056000.1 | 1 | yd1b | Morphological trait | Seed | C547 | C2340 |
| Osa01LNT0056000.1 | 1 | pl1.1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0056000.1 | 1 | sd-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0056000.1 | 1 | qPHT1-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0056000.1 | 1 | qRIE 1 | Resistance or Tolerance | Submergency tolerance | C86 | G54 |
| Osa01LNT0056000.1 | 1 | nan | Morphological trait | Culm/leaf | RZ801 | RZ14 |
| Osa01LNT0056000.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)