© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0056200.1
AAAAATTATCAAATTTCATTTAACAAAACTATGCTGATCCCTCGAAACTTATCAAATTTCATTTAACAAAACTATGCTGATCCCTCGAAACTTATCAAATTTCATTTAACAAAACTATCGACTTTCATCGATGCACTAACACTACCTGTAGATAAGGTTGATAACCACGAGAATAGAGCAGTTATCATTGATAAAAGTAAATATCAGCTACTCCTAGTTAACTGCACCAGGAGACGATTCAACGGTTTGGCACTTCCACTGGTTGCTAGCAGTGCAAATGGGAAGCCCAGATAGGCAAAAACACAAAGTGAGCCCAACATTTCACACCAGCATCACATCCTACCCCTTTTTTCTCGTGAAAATTGATACCAAAATGATGGCTTTATCGACCCGTGTAATGGCCCTAGATATCCCCTTCCTCAGTAGTGCAACCAACGATTGATTTAGGTCCAAACGACCTCCCAATAGGCATATAGATGTAGTATGTATGGATGGGATAGGCAGATAAGACATGCATAAGAGATTATCAAATTTCCAAAATTCATGAGTGGATCCTTTCATCAACTCCTCAATCTTCATCTTTCCGGCCAGTCTCTTTTCCTGGACAGGACAGTAGTACCTCCTATGTCGTTGTATCACTGATCAGATCTCTTACAAATCATGAGAGGAAGGTCTCTTGCTTAAAAGGTGCCTTGGATGGTTTTGCCGGTGGAAGCGCATCTATAGCCCATTTAGGTGTCTGGGATCCAATCCACAGAGGCGTGCCATTTTCCTTGTGCTTGAAATCAGGATATTTTATTGAAGGCTTATCTGATCGGTTATCCCACCATTTTCCAGGATTGTCCACCAGATCTTGCCACAACTCCCCTTGTTTTTGTTTTGAGATAGAAGAAGAATCTTGACTCTTCTTTGCCCAGTTTGTACCATTGCCCTTGTCACCACCAAAAGGCCTGTATTTTTTTGCAGCACTGAAATCACTACTGAATACTAAATCATCCAACTTTTCCAGCACTGCTTTTGGTGCAGTGTCAAGCCAAAGTGCCTCTTTTGATACATTGTTTTTGAAGTCAGGATACTTCGCATTTATAGATCCATTTTTCTTCTGAGGTCGGTTATCAGTCCAGTCTTGAGGATTAGCCACAACATCATTCCAGAGTTTGTTTAGCTTATCCTTGTTTCTGTAACCTGAAACTGTGCGTGGTGGATATTTAGGGATGAATTTTTTAGTTTCAACTTTCTTTTCAGCCTCAACAATCTGCATAAATCCCTCCTCTTCATCCACCATGCTATCTGCTTGAACTGCTTTACCACCAACAAATGATAGCATTTGGGCTAAAACCTGAATGTTTGCTTGGCCATCCATAAGTTTGGTCGGTGGGATATCTCCAGTTAGTTGCCCAGACACATATATATGGTCCTTCTCTTGCAAGTGAGACGCGGCAACTTGTGCCAAGTCATCTTGGAATATTATGGGAATCCAGAACTTGGGGTAATCAGCGTGGCGGTCCTGCACGAGCACCGAGACGGCGGAGAACCGGCCGTCGGGCAACCGCTGCAGCTGCACGGGCGCGCCGACGGTGCCGACGAGGCGCACGGCGTTGGCGACGCGCGGCTGGAACGCGATGGTGGACGGCCGGGGGATCTCGGCGGGGAGCTTCTCCCTCTGCCAGCCCGGCCCCCTCTCCTCCTCCCCCTCCCCCTCCACCGCGGCGGGGGCGGCCGCATCGGCGGTCGGCGGAGCCGGCTTGGTGCGGCGGGCGTAGGTACGCTTGGAGAAGGCGGCCGCGGGTGAGGAGGAGGCGGGGAGGAGGATGCGGTTGTTGAGGAGGCGGGCGAGGTGGCGCATGGTGGCCGGCAAAAACCCTAAACCCTAGAAGCGGAGGAGGAGGAGAGAAGTGGGGAAGGAGACGAGGTGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0056200.1 | 1 | 41781595 | G | T |
| Osa01LNT0056200.1 | 1 | 41781627 | T | C |
| Osa01LNT0056200.1 | 1 | 41782670 | G | T |
| Osa01LNT0056200.1 | 1 | 41782716 | T | C |
| Osa01LNT0056200.1 | 1 | 41782872 | A | G |
| Osa01LNT0056200.1 | 1 | 41782921 | A | G |
| Osa01LNT0056200.1 | 1 | 41783584 | G | A |
| Osa01LNT0056200.1 | 1 | 41783371 | G | A |
| Osa01LNT0056200.1 | 1 | 41783857 | T | C |
| Osa01LNT0056200.1 | 1 | 41784336 | C | T |
| Osa01LNT0056200.1 | 1 | 41785391 | T | G |
| Osa01LNT0056200.1 | 1 | 41785925 | G | A |
| Osa01LNT0056200.1 | 1 | 41785946 | A | G |
| Osa01LNT0056200.1 | 1 | 41786085 | A | G |
| Osa01LNT0056200.1 | 1 | 41786447 | A | G |
| Osa01LNT0056200.1 | 1 | 41786846 | G | A |
| Osa01LNT0056200.1 | 1 | 41786968 | A | G |
| Osa01LNT0056200.1 | 1 | 41787017 | T | C |
| Osa01LNT0056200.1 | 1 | 41788356 | T | C |
| Osa01LNT0056200.1 | 1 | 41788526 | G | A |
| Osa01LNT0056200.1 | 1 | 41782842 | A | G |
| Osa01LNT0056200.1 | 1 | 41783187 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0056200.1 | osa-miR5797 | Cleavage | 5.0 | 13.657 | 1 | 21 |
| Osa01LNT0056200.1 | osa-miR5807 | Cleavage | 4.5 | 13.482 | 1 | 24 |
| Osa01LNT0056200.1 | osa-miR5817 | Translation | 4.5 | 13.078 | 1 | 24 |
| Osa01LNT0056200.1 | osa-miR1846a-3p | Cleavage | 4.5 | 14.406 | 1 | 21 |
| Osa01LNT0056200.1 | osa-miR1846b-3p | Cleavage | 4.5 | 14.406 | 1 | 21 |
| Osa01LNT0056200.1 | osa-miR1861e | Cleavage | 5.0 | 12.969 | 1 | 22 |
| Osa01LNT0056200.1 | osa-miR1861k | Cleavage | 5.0 | 12.969 | 1 | 22 |
| Osa01LNT0056200.1 | osa-miR1861m | Cleavage | 5.0 | 12.969 | 1 | 22 |
| Osa01LNT0056200.1 | osa-miR5509 | Translation | 4.0 | 17.642 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0056200.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RG810 |
| Osa01LNT0056200.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0056200.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG810 | RZ730 |
| Osa01LNT0056200.1 | 1 | qNOP-1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0056200.1 | 1 | qPHT-1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0056200.1 | 1 | qPL-1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0056200.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ14 | R117 |
| Osa01LNT0056200.1 | 1 | yd1b | Morphological trait | Seed | C547 | C2340 |
| Osa01LNT0056200.1 | 1 | qPH1-1 | Morphological trait | Shoot/Seedling | C86 | RG236 |
| Osa01LNT0056200.1 | 1 | pl1.1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0056200.1 | 1 | qPHT1-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0056200.1 | 1 | sd-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0056200.1 | 1 | qRIE 1 | Resistance or Tolerance | Submergency tolerance | C86 | G54 |
| Osa01LNT0056200.1 | 1 | nan | Morphological trait | Culm/leaf | RZ801 | RZ14 |
| Osa01LNT0056200.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0056200.1 | 1 | rrw1b | Resistance or Tolerance | Other soil stress tolerance | C86 | RG236 |
| Osa01LNT0056200.1 | 1 | nan | Morphological trait | Root | RG109 | RM104 |
| Osa01LNT0056200.1 | 1 | grl1-1 | Morphological trait | Seed | RM431 | RM104 |
| Osa01LNT0056200.1 | 1 | qRNd1 | Resistance or Tolerance | Other soil stress tolerance | RG236 | C86 |
| Osa01LNT0056200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056200.1 | 1 | fll1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0056200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056200.1 | 1 | nan | Morphological trait | Seed | RZ730 | RZ801 |
| Osa01LNT0056200.1 | 1 | tn1-4 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0056200.1 | 1 | ph1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0056200.1 | 1 | sd1 | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Osa01LNT0056200.1 | 1 | nan | Resistance or Tolerance | Other disease resistance | RG109 | RG236 |
| Osa01LNT0056200.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ14 | R117 |
| Osa01LNT0056200.1 | 1 | nan | Morphological trait | Root | RZ730 | RZ801 |
| Osa01LNT0056200.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Osa01LNT0056200.1 | 1 | Fh1-2 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)