© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0056500.2
ACAAAACTGCTTGATAGCCTCCGTCTATGTTGAAAACCTCAGTAGCATAAGAACTAATACAACACGAGCAGCATAAATAGGGAGCAGAAACAAGCTGTTAGGTGGACAGGTTTGTTACAGCACAGCCCGTTCAGTCCAAGGGCAGCAAAATGTATCCTAGCCGACGGTGCAAGAGATAAGAACAATCCTAACTATCATTATCCAAGATATCCGTCTCCGTTTGCTGGAGACTCCTCTCTTCCTCGAATACGATCATACTACATATGTTTTACCGCATGGAAAATAGAAGGCTTCCAATCATCATTGCACAGTTACAAGAGATCATTGCGGCGCTGAACCGCGAGGCGGTGGATGCTGTGGGGGTGGCGGCGGAAGGCCCACATTGCCCATACCCGGCTGATATGAGCTCAGACCAGGGATGGATGTCATCTGTGCTTGTGCTTGTGGAGGCATTTTTCCCTGAGGCCTGTTGTACATGCCTCCCATAGGAAAGTTTTGCATGCCAGAAGCACTAGATCCACCTTGAATATTTCCCATTCCATTTGGAAAGCCACCCATTGGAGGCATATTACTAGGAGGGCCCTGGTGTGTCTGATTCATGCCAATCAAGTGCTGTGGCATTTGAGGCATCATCTGGTTTGATGAACCTTGTACTTGCATTGCCATTGGGTGAGGCATAGGTGGTAGTGGTGGATTCACTGGTGGTGGACCTGACATTGATGGAAGCTGAGGAAGTGGTGCTCGAGATCCTTGCGCGTGTGGAAGCATGTGTGCTGGGGGCTGCAATTGAGGCATATTTGGAGGTGGTGGTCGAGGAAATTGAGGATGCTGCTGCTGCATCTGTTGATATTGCTGTTGCTGCCCACCGGCTAGAAGAGATGGATGGGGACCTGGAGGCAAGGGAGGTTGCCCAGGTGGAAGGCCAGGTATCGATGGCCTCTGCTCTCCATGATCAGATCCATCAAGAGGCATTGCGACCCCAATGCCAGGAATTGTGCCTTCATTTCGTGATAATCCAGTATTAAATGGTCCAGGTGTTGTTGAAGGTTCAGGCATCTGGAATCCACCCATAGCACGGCCAGCAAAAGCAGGATGTTGGTCACCGTAACCTTGCATCTGTCCGCTGTTGTATTTATCGCGGGTAAGATCACCAGGCCTATTTCTACACCAAAATCGCGTAGCATGATCATTGCCCCCACTGCAAAGTAGATAACCAACAGGATGCCAGGCAAGGTCCCACACACTATTGTCATGTGCGTTATTTATCTCTATCTGTGGAGTTTCATGGCCAACCAACCAATGAAAGATCGCTCCATCATAGCTCCCGCTAACAAAATATTCTTCATGAAATGGATGCCATGCCAAAGCAGTCACATCCTTGTTGTGTCCACGGAAGGATTCAAGCTCTTTCATGGATCTAATATCATATAGCTTAATAATCTGATCCTTGGAGGCAGTCAACACCCAGTTCCCATTCTGATTCCACTTTACACATTGTACAATGTTTTTATGACCATGGAATGAACGTAGCTCTCTACCACTTTTTGCATCCCAAAGTTTCACGAGATAGTCTTTACCACCTGAAACCAGTAAAGATTTTGTAGGGTGCCAATCGACACTCTTAACATCCCAACCATGGCCTGGCAGTTAAGGATCTTTCTTCCTGGCATCTTGCAAAGTCCCAAACCTTCACAGTAGTGTCATCAGAACAGGAGCAAAACTTCAGGTCTGTTCTACAAAAGCTCAAGTCACGAACTGATTCTCTGTGAGCTGTTTTATTAACTTTAACATTGTTCATGTTACTTTGCCAATACTTGATTGCACCACCATCATCACCAGTGACCATCCAGTTCTCATTGTTACTCCAAATCATTGATCTTACAGCTTGGTCATGAGCCTGAAGGATCATTTCAAAATTAAAAGATTGGCCATTCCATAGGGTGAATTCACCACTCTGTGATCCCGTAATAAGCCGACGCCCTGTGGGAGTCCACAAGACCCGATTAATAGAGCATCGGTTCTTGTTTATTGATGAATGTACAAATTTTGCAGCAAAACTTGTTGAGGGATTATCGGGGTATGCAACAGACGGCAACATGTCCAGAACAGCAGCTGGAGTCGGCTGCACAGTGGGCCTGTCCCTAGCATCCCGCTGCCACATGCGAGCTTGAACATAACGGACGACTGTGCTTGTGTAGTCCACTGTTCGCCGCTGGACAGGCTTCCGCATCCTTTTAGCACCGAAATTGTCCCCATAAGCGTCGTACGGCGGCTGGTTCTGCTGCGGCGGGGGGTGCCCCTGGTGCGCGGCGTAGTCGCCGGGGATGTTGGTGGAGGACGCCGCCGAGAGCTGCCGCATCGGCGGCTGCGGCGGCGGGCCCCGGTAGAACTCCCCGCCGCCGCCGCCCCCGGCCTGAGGCGGCGGCGGGTGCTGCGGCGGAGGCGGCGGCGGCGGCGGCTGCTGCTGCTGCTGCATCATCTCCGCCGCCGCGAGCCCCGCCGACCTGAGCTAGGGTTTTGGATCCGTGCGGCGCGGGGGTTCGGGGTTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0056500.2 | 1 | 41874242 | G | C |
| Osa01LNT0056500.2 | 1 | 41874347 | T | C |
| Osa01LNT0056500.2 | 1 | 41875070 | C | G |
| Osa01LNT0056500.2 | 1 | 41875447 | C | T |
| Osa01LNT0056500.2 | 1 | 41875711 | T | C |
| Osa01LNT0056500.2 | 1 | 41875768 | C | G |
| Osa01LNT0056500.2 | 1 | 41876127 | C | A |
| Osa01LNT0056500.2 | 1 | 41876296 | C | T |
| Osa01LNT0056500.2 | 1 | 41876442 | G | T |
| Osa01LNT0056500.2 | 1 | 41876826 | G | A |
| Osa01LNT0056500.2 | 1 | 41876946 | T | G |
| Osa01LNT0056500.2 | 1 | 41876958 | C | G |
| Osa01LNT0056500.2 | 1 | 41877778 | A | C |
| Osa01LNT0056500.2 | 1 | 41878252 | C | A |
| Osa01LNT0056500.2 | 1 | 41878568 | C | T |
| Osa01LNT0056500.2 | 1 | 41878629 | G | A |
| Osa01LNT0056500.2 | 1 | 41879630 | C | T |
| Osa01LNT0056500.2 | 1 | 41880581 | A | G |
| Osa01LNT0056500.2 | 1 | 41878476 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0056500.2 | osa-miR5834 | Cleavage | 5.0 | 9.547 | 1 | 21 |
| Osa01LNT0056500.2 | osa-miR167d-3p | Cleavage | 3.5 | 16.804 | 1 | 22 |
| Osa01LNT0056500.2 | osa-miR2864.1 | Cleavage | 2.5 | 20.796 | 1 | 21 |
| Osa01LNT0056500.2 | osa-miR2864.1 | Translation | 3.5 | 22.834 | 1 | 21 |
| Osa01LNT0056500.2 | osa-miR2874 | Cleavage | 4.5 | 11.844 | 1 | 24 |
| Osa01LNT0056500.2 | osa-miR5144-5p | Cleavage | 4.0 | 13.729 | 1 | 21 |
| Osa01LNT0056500.2 | osa-miR5515 | Translation | 4.5 | 16.118 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0056500.2 | 1 | qRIE 1 | Resistance or Tolerance | Submergency tolerance | C86 | G54 |
| Osa01LNT0056500.2 | 1 | nan | Morphological trait | Culm/leaf | RZ801 | RZ14 |
| Osa01LNT0056500.2 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0056500.2 | 1 | rrw1b | Resistance or Tolerance | Other soil stress tolerance | C86 | RG236 |
| Osa01LNT0056500.2 | 1 | nan | Morphological trait | Root | RG109 | RM104 |
| Osa01LNT0056500.2 | 1 | grl1-1 | Morphological trait | Seed | RM431 | RM104 |
| Osa01LNT0056500.2 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056500.2 | 1 | qRNd1 | Resistance or Tolerance | Other soil stress tolerance | RG236 | C86 |
| Osa01LNT0056500.2 | 1 | ph1 | Morphological trait | Dwarf | RG236 | C547 |
| Osa01LNT0056500.2 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056500.2 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056500.2 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056500.2 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056500.2 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056500.2 | 1 | tn1-4 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0056500.2 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056500.2 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056500.2 | 1 | nan | Morphological trait | Seed | RZ730 | RZ801 |
| Osa01LNT0056500.2 | 1 | nan | Resistance or Tolerance | Other disease resistance | RG109 | RG236 |
| Osa01LNT0056500.2 | 1 | fll1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0056500.2 | 1 | ph1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0056500.2 | 1 | Fh1-2 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0056500.2 | 1 | sd1 | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Osa01LNT0056500.2 | 1 | nan | Morphological trait | Root | RZ730 | RZ801 |
| Osa01LNT0056500.2 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ14 | R117 |
| Osa01LNT0056500.2 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Osa01LNT0056500.2 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG810 | RZ730 |
| Osa01LNT0056500.2 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RG810 |
| Osa01LNT0056500.2 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0056500.2 | 1 | qNOP-1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0056500.2 | 1 | qPHT-1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0056500.2 | 1 | qPL-1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0056500.2 | 1 | qPHT1-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0056500.2 | 1 | qPH1-1 | Morphological trait | Shoot/Seedling | C86 | RG236 |
| Osa01LNT0056500.2 | 1 | pl1.1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0056500.2 | 1 | sd-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0056500.2 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ14 | R117 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)