© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0056600.1
TTTCTTTTTCTCTTTCTTACATAGCGAGAATCTCCTCTTTTATGGGGGCCAGGTTAGCAACCGAACAGAGAGCGCCTTCACATCGTAAAGGATCTCAGCTCTCCTTTTGTCCAAATGTCAAATCTAATGTCACCGAGATGCAATCTCATTATCGATACTGGAGGCTGATTTTTCAACCATCCGAACATTGTAATGCTGGTATACCCTTGTCCTGTTCTCCTGCCACCATTGTTCTGCCTGGGTCTCGCTGAATCTCTTCCGGCTGAACCGAACCCGCTTGAGATCTCTCGCACCTCCAGGCAAGGCGGTTAGAGTGATGTAAACGCCTGGTTCGTCTTGCTCCACCCATTCAGCCTCATGGCATGATTCTGCTTCAGGCAGTCTACTACCATTTTTGCCAACTTCTGGATGACCTGCCTTGATTCTAACAGAACTTGGTCCATTAGAAGCAAGCAGCCCATTAGGACCATTTGAAATTTGTTCTCCTACACTGCTTGGGCTACCCAAACTTTCTGTAGCCATGGATGATAGCTCACTTGGCATAGGAAATCCAGATAGGGGCGGCAGTTTGCTATTCTTGGTTACTCCTCCAGGCAATCTCTCTGCCATTCCCTTCAATTGTGCCGTGAGTGATTTGATTACTTCTTTTGCAGCCTTGCACTTGGCAGTTTCCTCCCCAGCAATTACAATTGCTTCCTTCAATTGTTTCGTAGTTCTCTCCAGCTCAACTTCCAGAAGATGAGACTTCCTAGTAAGATTCTCCACCTGGGACCTCAAATTCAAGACCTCGTGGCTTAGACTATCATTTGTAGGCTTGGCATCATTGGCAATAACTCTAGGAGAAGTTAGACCACCCAAAGTAGGCGTTGGGGTTGTCGATCTAGGAGGGCTTGTTCTTCTTGAGACAGGTGATGTTGCCCTAGAAACAATTCTTGATCCAGGAACAGATGCTGAAAAAAACTTCTTTGAGGATCCAAATACAGGATTGAAGGATCTTGAAATATTGAGCCCGCTCCAGTGTGAACTGCCATTTGGAACAGGGGAAACACGAGTGCTGTTGAATTCAAACTTTTTGTTTTTCTTCGAATATCTACTGTCCATGTTCTTAAAAGATTCCATAGAAGACAATCTCGACAGTTGGGTATTTGACCGTGTTTCCAGCTCCTCCTCATTAGTTTCACTGAATCCCTGTACAACAGTGCCTCGCTTAGTTGAGGAGTTTGTGTCTGTTTCAAGCCCCTTAGTGAGTTTGCTGTAGCAACTATCACAGACGCGGTAAGGCTTGTTCGGGTTTGGCGCCAATGAAGCCTTCAAAGATTTTTTACTGCTGCATGAATGACAAAATACTAGAGCACAATTGTAGCAATTATGACGTTTTCTCCTCAAGTTAAACGGCTGACGGCATCCAGAGCACATTGACTGATCACTTCCAGATACCCATTTATGAATGCATATTGCTGCAGTGAAGTTAATTCCACACACAACACTTCTGACTTGCTTATCTTTCAATGCTTCAACCAATGTAGGAGTATTCTTATCATCAGTACCACCATGACCTAACCGACCATTTGCACCTTTACCCCACGTGTACACCTCAGTCCTGGATGTCAATACAGCCACATGATAAGCACCACAAGAAATTTCTTCTACAAAGTTTTTGTGCAGCTTCCCTTCAACACGTACAGGAAGCAAACCATCTGCTTGTGGATTTCCAAGCTGACCATAGACAGCACTACCCATTGTATATACATGCCCTGAGGTTGTAAGAGCCACTGTCAAGCAATGCCCACAAGCAACTTGACAAAAATTGGGCTCCACCAAAGCAGCCACACATGTTGGGACAAATCTTGAGTCCTTGTCACCATGTCCTAAACGGCCTTTATCTCCATCACCCCAAGTAAATATCTTGCCAGATGAACAATTGCTAGAACTTGAATTCCCAACCATGACTTCTACAACAGCAGCAGTGTGCCAAACACCACAAGCTGCCCGAACCGTTCGTAGACCTTTTAGGGATTCTACTTCCCTGGGGACTGAAAGACTTGCACGATCTCCATGCCCTAGAACACCAAAAGATCCATCTCCAAATGTGAACAGCTGGCCAGCAGAAGTTACTAGGGCCGTATGCCAAGGGCCACAAGAAATTGATGATACATGTATACCCTCTAATGGCCCATCAACCCTTTTTGGTACCCAGTGACTGACATCATTTCCATGACCCAAAAGCCCAAATTTAAAGGTGCCATCCCCCCATGTATACAGATCTCCAGATAGTGTAACAGCACAGGTATGGTATTCACCGCATGCTACCAGCTCTATGTTCATGTGAGCAAGAGAATCAATGAGTTTTGGTTGTGCCACATCACAATCTACACCATGCCCAAGCCGGCCACCTGATTCCTCACCCCAAGAGTAGATCTCCCCTTGTTTAGTGACCAATGCAGCATGCCTTCCTCCACAAGATATATTCTGCACATCAAGTCGCACAGCGAACTCTAATGGTTTTGGTACAAGATAATCCATCTTTGCACTAGAAGAGCTTCCAACCCTTGAACTACCACCACCGAGAATTCCTTCCCCAGTTCCTTCTCCCCATATGAAAACGTCACCTAAAGCATCCCCATCATCATGACCTGAACCATGACTTGACGAACTGATAGCACTTGAATAACTGACCCGAAAAGCATCCATTGGGATGCCTCTTGGGTGACCATTTGTGTTATCTGAGTGTCCAGACGACATAGAGTGGACTGATCCGGCATTAGAATCTGATGGGAAGAAGCCCTTGGGAGGAACTGCATATAACACAACGTCAGAAAAGGCCTTATCCAATGCATTCTTTGGTGGACTCCCAAATGGACTCCGGAGTCGGTAATGATCACTGCCATCCTTATGGACACTGTCATTGCTACTGAAGGGAGAACTCAATGGAGAACTCCGACGTGTATAAGTCCTTGGACTAGTTGCACCAGAGGATATGATATCACTTCTCGATTCTGTTCTCCATTTTCTTTGATGGCTATGTGAAATCAATGTTTTCAGCCCAGCAAACCACACTTCTGCCTCATCTTTATCTTTACAAATGATGTCCAATGATCTATCATGTGAAATCAGAGAAAACGACTGACATTCCTTCTCAGGTCGTGGATACCTCTGAAAAATTGCAGTCCGTTGCCCAGGAACTATCCTGGACACTTGGCTCAACCTTAGATGTTTCTCCTCTTTCCCTGAGAACCATATCAGTACAGATTCGTCATTGGATAACCTAAATGGACAGAACTTTGGTTTTCCCCTACGTCCATACTTCAATAAGTAAGCTCCTTTCTTAAGGGCGGTGATAGCCTGCTCGATGTCGCGCTCCACGGGGGGGGCCGCCCGACCGCCGGCGAGATCCGACGACGCGTCCGACATGGGCGCGCGCGGCGCGCATCAACAACCCCGCGGCCACCGCCGCCGCCGCCACACCATCACAGCCCTTCTCCTCTACACAGCAGCGGCGCGCCTCTTCTATCCTGATGGCCGCTGCAATCACCACCACGGGCAGCGGCGCGAGCGCCAATGGGGGCCTCGCCGACGGCGAGTATCTCCGTCCGTGAGGAGGTGGCTCGCCGCAACCGGAGGTTTCCGCGGTGGCGGCTGCCGCGGGGGGGATCGGATCGGAGCTCGAGGCGGAGGAGGAGGGGTTTGGGAGTGGAGGAGGGAGAGAGAGAGAGATCGCGACGCGGAGGAGGGAGACGGAGAGGGAGAGAGTGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0056600.1 | 1 | 41927674 | A | G |
| Osa01LNT0056600.1 | 1 | 41926402 | A | T |
| Osa01LNT0056600.1 | 1 | 41926431 | T | G |
| Osa01LNT0056600.1 | 1 | 41927061 | G | A |
| Osa01LNT0056600.1 | 1 | 41927213 | C | T |
| Osa01LNT0056600.1 | 1 | 41927613 | C | T |
| Osa01LNT0056600.1 | 1 | 41929924 | C | T |
| Osa01LNT0056600.1 | 1 | 41930026 | T | G |
| Osa01LNT0056600.1 | 1 | 41930045 | A | G |
| Osa01LNT0056600.1 | 1 | 41930456 | T | C |
| Osa01LNT0056600.1 | 1 | 41930495 | C | T |
| Osa01LNT0056600.1 | 1 | 41931072 | G | A |
| Osa01LNT0056600.1 | 1 | 41931306 | A | C |
| Osa01LNT0056600.1 | 1 | 41931615 | G | A |
| Osa01LNT0056600.1 | 1 | 41931914 | G | C |
| Osa01LNT0056600.1 | 1 | 41932674 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0056600.1 | osa-miR5530 | Cleavage | 4.0 | 23.525 | 1 | 21 |
| Osa01LNT0056600.1 | osa-miR5815 | Cleavage | 5.0 | 15.419 | 1 | 24 |
| Osa01LNT0056600.1 | osa-miR5821 | Cleavage | 5.0 | 16.432 | 1 | 21 |
| Osa01LNT0056600.1 | osa-miR1437b-5p | Translation | 5.0 | 15.886 | 1 | 21 |
| Osa01LNT0056600.1 | osa-miR393a | Cleavage | 4.0 | 22.221 | 1 | 21 |
| Osa01LNT0056600.1 | osa-miR393b-5p | Cleavage | 4.0 | 22.221 | 1 | 22 |
| Osa01LNT0056600.1 | osa-miR444a-3p.1 | Translation | 4.0 | 18.838 | 1 | 21 |
| Osa01LNT0056600.1 | osa-miR1428a-5p | Cleavage | 5.0 | 18.11 | 1 | 21 |
| Osa01LNT0056600.1 | osa-miR444d.1 | Translation | 4.0 | 18.838 | 1 | 21 |
| Osa01LNT0056600.1 | osa-miR1874-3p | Translation | 4.5 | 12.059 | 1 | 24 |
| Osa01LNT0056600.1 | osa-miR2097-3p | Cleavage | 4.5 | 9.212 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0056600.1 | 1 | fll1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0056600.1 | 1 | ph1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0056600.1 | 1 | nan | Resistance or Tolerance | Other disease resistance | RG109 | RG236 |
| Osa01LNT0056600.1 | 1 | sd1 | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Osa01LNT0056600.1 | 1 | nan | Morphological trait | Root | RZ730 | RZ801 |
| Osa01LNT0056600.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Osa01LNT0056600.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ14 | R117 |
| Osa01LNT0056600.1 | 1 | ph1.2 | Resistance or Tolerance | Drought tolerance | RM104 | RZ801 |
| Osa01LNT0056600.1 | 1 | Fh1-2 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0056600.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RG810 |
| Osa01LNT0056600.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0056600.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG810 | RZ730 |
| Osa01LNT0056600.1 | 1 | qNOP-1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0056600.1 | 1 | qPHT-1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0056600.1 | 1 | qPL-1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0056600.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ14 | R117 |
| Osa01LNT0056600.1 | 1 | qPH1-1 | Morphological trait | Shoot/Seedling | C86 | RG236 |
| Osa01LNT0056600.1 | 1 | pl1.1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0056600.1 | 1 | qPHT1-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0056600.1 | 1 | sd-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0056600.1 | 1 | qRIE 1 | Resistance or Tolerance | Submergency tolerance | C86 | G54 |
| Osa01LNT0056600.1 | 1 | nan | Morphological trait | Culm/leaf | RZ801 | RZ14 |
| Osa01LNT0056600.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0056600.1 | 1 | rrw1b | Resistance or Tolerance | Other soil stress tolerance | C86 | RG236 |
| Osa01LNT0056600.1 | 1 | ph1 | Morphological trait | Dwarf | RG236 | C547 |
| Osa01LNT0056600.1 | 1 | qRNd1 | Resistance or Tolerance | Other soil stress tolerance | RG236 | C86 |
| Osa01LNT0056600.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056600.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056600.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056600.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056600.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056600.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056600.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056600.1 | 1 | tn1-4 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0056600.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0056600.1 | 1 | nan | Morphological trait | Seed | RZ730 | RZ801 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)