© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0004000.1
GAGATAGAATGCATATGTAAATGGGTGACTTGTATAAAAGGAAAGTCACAATTTTCAGCAATAAATGAAAGAGAGGTGTATTCGTAGCGACTCAATTCTGCAGGGAATTCGGCTGTACATGAGTATTTTGATTGAGTTGTATTCCCTCCAGTAGAAACTTACAAATGTACATCCTTAGAGAAAAGATAAGGAGGAAGACATAAAATAGAAAATGGCGGCGCACGAAGAACGTCGCTTTGAAGAATCAGTAGTTACATTGTGATTGCGGTATCATTGATTTTACTGTTTATGTGGTAATTGAGTCTTCCTTCTGTTCAGAGGATGCAACGGCAACAGCACTGCCTTGCTCATCCCCTTGACCCTTTTCTTCATCAACACCCTCATCATCTGGGATCATCACTGCCTTCACCTGTGCAACAATAACCGTAATGTCATCCATCTTACCACCTATTAGTTTCCCTCCAATGAACTTTTTCCACGAGGGGACATCAAAACCCCGACTCCGAGCCTCCATTGAGTAGGGTGAATCAAAGGTGACATCCACTGAATGCTTCCTTGCAAGCTCTGCTAGTGCTTTTGCAGCTTCATCTACCCCTGGAGACTCGGAAATGACAGAAACGATCTCTTGATCGAATATATTGTCAAAAAATCCATCTGAGCCACTGACAATCATATCACCCTCCATAAGATTTACTGTGCAAACCTGGTAGACAACTGGATCAAAATCAGAAGGTTCTACAAATAATGCTTAAATCTTGTACGACTATCTTGATTACTGTAGTGAAGCACTTGGTATTATGTTTCCACTGCATTAGTGGTATCTTTTATGGATAGATTTGCGCATGCATGCGTGTCCCTTGTAAGATCTTCCCCATAATTTTGATTTGTCCACACATGCAAAATATCTGCATGACTTGAGATCATATAGAGTTTTCAAATTAAGAAATAATTAATGTGCATGTCTTGGACTCGTTGTAACATATGGGCAACCACCTAGAACTGAGTATGCTAATAAAACAATCGTCACACACACAGCTCTATTATTCTGACCTACAATAAGGCACATACCAGTGCATCCAGATACGTTTGACCAATTGCTTCAGAGCTTAACTGGTATGGGCAGTCAAAGTAATGTTCTTGAGGACATGTAGAGAACATTACTTGGCCTTTTCTAATTACTTTCAAACCACAATCTCCCACACTTGCAATTTTTAGAATCCCTGTCTTCTCAAGCATTGCAATGATTACAGTTGCAGATCCAACAGAAGTTGTTGCAGCATGAGCCTTCATTAGAAGAAGCTGAGGATCATGATTGACCTCCTCATCCTTGAGAAAAGTAGAAGTGTGTGCCATGAGCTCTCGAGAAAACAGAGCCGGATTGACATCCTTTTCTGCCCATCCTGAAACTCCATCTGCGACGGCAAACACTCCACCATCATCGCCGTTCACAAAGAAAGCATCTTCTCCGCCAGTCTCAGCCTTTCTTGGGTGTGGTATTAGATGAGTTCCAATAGTTAACACAGCTTCCAACTTGGCGGCGCGAAGAGGGGAGAAGCGCGAGCGGCGAAGCGGGAGATGGGGAGAAGGGGTAGTGGGTGCGTGGAGGCGAGGCGGCGAGAGGCGGGTAGCAGTGGAGGAGGCCGCCATGGCTGGCTTGCTGCTGCTCTATCTCCTCCTCGCCTCGCCTCCGTCGCCCGCGGCCACCGTGAATCGCTCGCTCGCTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0004000.1 | 1 | 3334260 | C | T |
| Osa01LNT0004000.1 | 1 | 3334542 | C | T |
| Osa01LNT0004000.1 | 1 | 3334728 | T | C |
| Osa01LNT0004000.1 | 1 | 3335107 | T | C |
| Osa01LNT0004000.1 | 1 | 3334443 | A | G |
| Osa01LNT0004000.1 | 1 | 3334987 | G | A |
| Osa01LNT0004000.1 | 1 | 3333734 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0004000.1 | osa-miR5541 | Cleavage | 3.5 | 19.476 | 1 | 21 |
| Osa01LNT0004000.1 | osa-miR5828 | Translation | 4.0 | 20.047 | 1 | 21 |
| Osa01LNT0004000.1 | osa-miR5832 | Translation | 4.0 | 14.206 | 1 | 21 |
| Osa01LNT0004000.1 | osa-miR5832 | Translation | 5.0 | 11.904 | 1 | 21 |
| Osa01LNT0004000.1 | osa-miR167c-3p | Cleavage | 4.0 | 18.271 | 1 | 23 |
| Osa01LNT0004000.1 | osa-miR1878 | Cleavage | 4.5 | 13.578 | 1 | 24 |
| Osa01LNT0004000.1 | osa-miR2097-3p | Cleavage | 3.5 | 23.081 | 1 | 22 |
| Osa01LNT0004000.1 | osa-miR2927 | Translation | 4.0 | 14.423 | 1 | 23 |
| Osa01LNT0004000.1 | osa-miR5488 | Translation | 4.0 | 9.117 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0004000.1 | 1 | gp1a | Morphological trait | Panicle/flower | RM1 | R753 |
| Osa01LNT0004000.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Osa01LNT0004000.1 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0004000.1 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)