© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0004100.1
CCTGGGTATTACTAGCATGCAACCATCATCTGTAAGAACGAGGTTTAAAAATGTTGAAACAACAGAGCACATCAAATCTTCGTATGTTGGGTGGTATTCTTCTCATGTTTACAAAAGACAAAATGAACACATCTATCCAGTTTACGCAGTCCTTTTCCTACTAGATGGAGAGGATCCATCTTGCCGCGGACGCTTCAACTTCTGTATGCATTCTCCATCATTCCTCGTATGCTTCAAAGATGGGTCGCTGACATAGTGAAAATAATCCACGTAATACAGTGCATTCTCGTCCTGATGAGCTAGACCAACAACTTCTTGAGTCCCTCTCCACTGAATCTTGCATTTGTGAGCAAGCCTTGTACATGAATAGCCGTCACGGTCTAATTGACCTTCGGATATGAGATTCTGTCTCAGTCCCTTACAGTACAACACATTAAACAGTGTTACTGTACTAGTCTTCACATTTCCAATTTTTGAGCTTAAAAATGCACCTCTGGGGGTAACAAATGACTGTACCTCGTGTCTTGTATCAGATAGAAGTCCCTTTATACCAGTCATGTGATTGCAGCATAGAGAATCAACTACCCACAAATTTTTCTCATCAATTGCCGTTGAGGACAACATCGATCTGGTTATAGCTTGTTGTTCTTCTTTTCTGCATATGATGCTTCGAACTATATATTCATTTCTCTTTTCGTGGAGATATCCCTCGCCGATCATTTCACCTTTATTTACATCAAAGATTTTAATCCTTTTATCTCCAACATACATGAGGGTGTTAGAATCATCCAGTTCACCAAGAGATATAACTTTAAATTTGAGAGTAGAGTGGTAGAATACTGGACTCAATTTGATTTGATCATATATCACTTCACCGGACATGTGCAGGCACACTGGGTCGCCACTAGCATCATAAACAGTATCCTGATGTTCAGTAGGAACCTCATGGAGATTTTTGAAGAGTTTATCATCATCACACATGTGGTGGCTAGCACCAGAATCAAAATAGAAGTGGACATCTTTCTTAGTAATGCAAAAAAGGTGCCCTTGTTGGATTTTGCTTTTTGGGTCCATTGCAAAAACCTTGTTGGAATGAAAGGGATTGTTGGAGAGCACTGATTTTACATCATGTAAACTGATCAAATCTTGTGAGTAATCTGATAAAGTAGTATGTAGTGGGAGCGGACAACGTTTTCTCATATCATCATAACTCTCAAAAAAAGGAGGTTCATAGTCCAGAGGCAAATTTGATTAACAAAGCTCTCAGCTGCATCGGACCTCATTGTCCATATACTTTGAGTGGATCCCGTCAGCCGTAAGTCGATTGTAATTTCGCTGAAGTATGTGAATGATAGGCAATACTCCTCCAACAGAGGGCCCTTCTCATCATAGATAGAGAAGATGATAGTTTTGAGGAACTTCTTTTTCAGAGCATCATAAACACCTTTTTCTAGCCAATCAACAAGCCTTTGGGACTCGTCATCCATCGGCGTAAGCTTTTTTATCTGCATCCCTGTCGGTAGAAAAGGCATATCAGAGAAGAACTCCTTAGAAAACAATCCTCTCACGTAGCATATATTGTAGAAGACTATTTTAATAAGACTCATCAAGCTGTCAGTTAGCGCATCATCATTCTCCTAAAATAAGTTTAGCAACAATAAATTAGTTTAGCAAACACAATTGTTGCATGGACAAATCTAAATTATTAAATAGGTTGGAACCGTGAGAAAACAACCTCGAGCAGGCTAAGAAATGCAGGTGGCCAAGACAGAAAATATGCAAATACATCAACCGGCACAGCAGCTGGAGAAGAAGTTATGAACTGAAACTCCAAAGATGAAGGTTCCAGTGCGAGCACTTGGTTGGAGTTGGAGGCGATCCAGCAGATCTGTCCCTGATCGTGGGCGGCACAGCACATGCTGAGATCAAAACGAAGAACCCTAACATGCTTGGAGCGTGGAAGGATGCACCAGAGGCAATCCTCGCCGTTGACGAAGGCGACCCAGGCGCGAGGGCGGTCGTCGTCGATGGTGACGCAGACCGCCTGGAAGTGCAGCCTACTGGGATGCGCGCGCGAGAGCACCGCGGCGCCGATGATGCGCCGGGTTTGGCGCCACTGGTCGTCGGGCAGAGCGTCGCGCGGCGGAGGAGGGAGCAGAGCCCGGCGTCCGGATGCCGGATCGAGCACCAGTATGCGGAGCAGGAGAATGTCGGGAAGCTCGCAGGGTAGTAGAAGGACCAGGCCGTGGTGGACATCGTGCACGGACACACCGGAGAGGTCGTCGGGAGCCAAGGGGAGGGAGAGGCGCGGGAACGAGGCGTCGCTGGGGACGAAGACGGGGGGGATCTGGGCCGACCGGATTTTCTCCGGGTGCAGGAGGTAGCCGACGAGCGGCGGTGTGCGGGGGACGGCGAGGGCCGCCGCGCGCCGCCAGCTCTTGTTGGCAAGGGCCGCGCGGACCACATCCCTCGGACACAGACACTTCAGGATGGATCGGAGCAGGAAATCGTCCGTCAGCACGGCCGCCATCGCCGCCGCCGCCGGTGGCTCTTCGTCGCCTTCCATTGCCGAGATTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0004100.1 | 1 | 3388229 | T | C |
| Osa01LNT0004100.1 | 1 | 3387051 | A | C |
| Osa01LNT0004100.1 | 1 | 3387394 | C | T |
| Osa01LNT0004100.1 | 1 | 3387435 | G | A |
| Osa01LNT0004100.1 | 1 | 3388062 | A | G |
| Osa01LNT0004100.1 | 1 | 3387616 | A | G |
| Osa01LNT0004100.1 | 1 | 3389825 | G | A |
| Osa01LNT0004100.1 | 1 | 3390019 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0004100.1 | osa-miR6249a | Translation | 4.5 | 24.035 | 1 | 21 |
| Osa01LNT0004100.1 | osa-miR6249b | Translation | 4.5 | 24.035 | 1 | 21 |
| Osa01LNT0004100.1 | osa-miR166a-5p | Cleavage | 4.5 | 13.533 | 1 | 21 |
| Osa01LNT0004100.1 | osa-miR166c-5p | Cleavage | 4.0 | 13.533 | 1 | 20 |
| Osa01LNT0004100.1 | osa-miR166e-5p | Cleavage | 4.5 | 13.533 | 1 | 21 |
| Osa01LNT0004100.1 | osa-miR166l-5p | Cleavage | 4.5 | 13.948 | 1 | 21 |
| Osa01LNT0004100.1 | osa-miR171d-5p | Translation | 5.0 | 13.93 | 1 | 21 |
| Osa01LNT0004100.1 | osa-miR426 | Translation | 5.0 | 17.283 | 1 | 21 |
| Osa01LNT0004100.1 | osa-miR1320-3p | Translation | 5.0 | 14.543 | 1 | 21 |
| Osa01LNT0004100.1 | osa-miR5524 | Cleavage | 4.5 | 15.672 | 1 | 21 |
| Osa01LNT0004100.1 | osa-miR2873c | Cleavage | 3.5 | 17.414 | 1 | 21 |
| Osa01LNT0004100.1 | osa-miR166k-5p | Translation | 3.5 | 18.079 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0004100.1 | 1 | gp1a | Morphological trait | Panicle/flower | RM1 | R753 |
| Osa01LNT0004100.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Osa01LNT0004100.1 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0004100.1 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)