© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0057500.1
AGAAATTGACGGTGCAACCAGATTGGATATTTGAGTGTTGCATTACAAAGTTGATGCCAACACAATTTTCATCACCCAGTGACCCTTCGCCAAAAATGTCGCAACAAAATCTAACCCACCGGAGCTCAGCTTAGCTCACCTTAGTGTAGTTTATGGCGTTTCTTGCCCCATGTATATGGGAATCTTGGGATGCACCGCCGCTGCATCCCTAGTTGAGAAATACATCAGCAGAATGCAAAATACAATATGCCTCCTCTGCTCAGGAACGACACCTCAAGCTACATGGCGATCAATTTCTATCCTTTCTTTTACCGGTTAAGGAGCCACCATTATGTTCTGCTCGCCTCTGCTCACATCCATGAGATGCCTCGGTGGGAGATACATCCTGGACAACCCCGTTTGCTGCAGGAGCTTCATGGGGATGTTTGCAGTGCCCTGTCCTATCAATACAAAGCCAAATCCTAGCTCTGTCATCACCAGATTTCTCCTCCATAGGCACATGCCAAGATCCCATCTCCGATTCCTGAATCTCCGAAGAATATGGAGGTGGCATCATAAGCACCGCCTTTCCTTTACTAAAGGTGTACTTGACCTGATGCCGTTGCTTCCACTTGGGGAAAAAAGATGACCCCAAGAGCTCAAATATGTGATCTCTCATTTCATCATTAGTCACAAGCAAACAATTCAACCTAATCGCCGCATACAGCCAATACCAGTCATCATTTGACCCAATTGGTGAAGTGTACAATGCCCCGTTCGCTCTCCAGGTTTCAATCAGGTGTCTATTAGATGCATTTTCCATAAGCTTGGCAATGCGTTTATTATGTAATACGACAAGTGGCCATTTACCATTATATCTATCCCGTAGCTCTGTTACAACAGCGTCCAGCTGAGTCAAACTAAAGCCACCCTCTGCAAAATTTTGTTGATAAAGTGCAATATTTGCACCATCAACTATAGCTTCATATGCTCCATGTTCTTCCAACCACTCCTGAAACTGGCTGAAATTTATTTTGGTCTCCCTCTGAAGGGCCAGACTGGCAACAGAATCGGCAAACCTCTGCGTCTCCTCGACGTCAATGTCAACACATGCTAGACGGCAACCACACCCCTCACACTGGCCATCTCCTCCAACTCTTACTCGCTGCACAGTCCAAGGGCCGGTCCCAAGCCATCCAAGCCGATGGCACCCGCCACCATTGGCCACAATGGCGTCCTTCACCTTACAAGCATCCCACTCGGCCTTGCCCGCCATTGCCGCCTTACCGCTCCGAAACCAACCCTCCAGCACCTCCGCAGTCTCCTCGCCGACACAATCCACGGTGCGGCTCAGCTTGTGCATATACTCATACACCTTGTCTGCGTCCCCTGCCTTGGCGCTGACATCAAGGAGCGCGGCGATCTCGGGCTCCTCGGGGGCAACAGCAGAGGCCTCCATGTGGGCATCGACGGCGTAGGCCTTCCCGGCCTCCCCCGCGCGGCGGAACGCGGCGAGCACGGGGCTGTACGAGCGGAGGCGCGGGGCGACGCCGTACTTGTCCCTCATGGTGGCCACGAGGTCGAAGGCCTCGTCAGCGGCCGCGGGGTTGGAGGCATCGGAGGCGGTGACGCGGGCGAGCGAGGTGATGGTGGCCTCGGAGGGGGAGGCCCCGGAGCCGAGCATGTGGGAGAAGACGCGGCGGGCGGCGGCGGCGGCGTTGGGGAGCGAGTCGGCGTCGGCGGTGGCGAGGAGGTGGAAGAGCTGGTTGTACTGGTGGGCGAGGAGGCGCGGGGCGTCGGGGCCGGAGAGGGCGGAGTCGAAGGCGGCCATGGCGGCGGCGGCGTCGCCACGGCGGGTGCAGTCGGTGAGGGTGCGGGAGAGGTCGGAGTTGGGGCCCTTGGAGCCACGGCGCGGGCGGCGGCGCGCCGGGGAGGAGGCGCCGGCGGCGGTGGCCATGGGTGGGGCCGTGTGGGTGGTGGTGGGGTGGAGTAGTGGAGGAGGAAGAAGAACCCTAATTAGCGAGGTGGGTTTGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0057500.1 | 1 | 42696818 | A | T |
| Osa01LNT0057500.1 | 1 | 42697348 | T | C |
| Osa01LNT0057500.1 | 1 | 42698065 | C | T |
| Osa01LNT0057500.1 | 1 | 42698080 | A | C |
| Osa01LNT0057500.1 | 1 | 42698608 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0057500.1 | osa-miR5816 | Translation | 3.5 | 8.844 | 1 | 24 |
| Osa01LNT0057500.1 | osa-miR5816 | Translation | 5.0 | 18.068 | 1 | 24 |
| Osa01LNT0057500.1 | osa-miR5832 | Translation | 4.5 | 16.001 | 1 | 21 |
| Osa01LNT0057500.1 | osa-miR5837.1 | Translation | 5.0 | 9.475 | 1 | 21 |
| Osa01LNT0057500.1 | osa-miR396e-3p | Cleavage | 5.0 | 19.612 | 1 | 24 |
| Osa01LNT0057500.1 | osa-miR1851 | Cleavage | 5.0 | 20.879 | 1 | 21 |
| Osa01LNT0057500.1 | osa-miR1853-5p | Translation | 4.5 | 24.269 | 1 | 24 |
| Osa01LNT0057500.1 | osa-miR1428b | Cleavage | 5.0 | 19.91 | 1 | 21 |
| Osa01LNT0057500.1 | osa-miR1428c | Cleavage | 5.0 | 19.91 | 1 | 21 |
| Osa01LNT0057500.1 | osa-miR1428d | Cleavage | 5.0 | 19.91 | 1 | 21 |
| Osa01LNT0057500.1 | osa-miR5075 | Translation | 4.0 | 20.991 | 1 | 21 |
| Osa01LNT0057500.1 | osa-miR5145 | Cleavage | 4.5 | 15.937 | 1 | 24 |
| Osa01LNT0057500.1 | osa-miR5145 | Translation | 5.0 | 18.547 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0057500.1 | 1 | qHID-1 | Morphological trait | Seed | RG810 | RG331 |
| Osa01LNT0057500.1 | 1 | qTGW-1 | Morphological trait | Seed | RG810 | RG331 |
| Osa01LNT0057500.1 | 1 | nan | Physiological trait | Eating quality | RG331 | RG810 |
| Osa01LNT0057500.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ14 | R117 |
| Osa01LNT0057500.1 | 1 | qPH1-1 | Morphological trait | Shoot/Seedling | C86 | RG236 |
| Osa01LNT0057500.1 | 1 | qBMS1-2 | Physiological trait | Source activity | RZ801 | RG331 |
| Osa01LNT0057500.1 | 1 | qHID1-2 | Morphological trait | Seed | RZ801 | RG331 |
| Osa01LNT0057500.1 | 1 | qTGW1-3 | Morphological trait | Seed | RZ801 | RG331 |
| Osa01LNT0057500.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0057500.1 | 1 | rrw1b | Resistance or Tolerance | Other soil stress tolerance | C86 | RG236 |
| Osa01LNT0057500.1 | 1 | nan | Morphological trait | Root | RM1387 | RM1067 |
| Osa01LNT0057500.1 | 1 | qRNd1 | Resistance or Tolerance | Other soil stress tolerance | RG236 | C86 |
| Osa01LNT0057500.1 | 1 | fla1 | Morphological trait | Culm/leaf | RG810 | RG331 |
| Osa01LNT0057500.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RG810 | RG331 |
| Osa01LNT0057500.1 | 1 | ph1 | Morphological trait | Dwarf | RG236 | C547 |
| Osa01LNT0057500.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RG810 | RG331 |
| Osa01LNT0057500.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RG810 | RG331 |
| Osa01LNT0057500.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ14 | R117 |
| Osa01LNT0057500.1 | 1 | nan | Resistance or Tolerance | Other disease resistance | RG109 | RG236 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)