© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0057600.1
GCCATCAGAAATCAGCATCATTAATCCAAATTTGCCATCATGCATCACAAATCAGCGAGCATCATGCAACAATCAAGTATTGTTGTTCACTACAAAAGACATGTGGTGCCACTACCACCTTAACAAGCAGCTAACCAATATCCTACAAAAAACATACGGTGTCCACTACCACCTTAACCAGCAAATATCATACAAAAGCCACATCGTGTCCACTACCAACTTAACCAATAGTTAACCAATATTACATAAACAGATGAAAAAAAAAAGTGAAACTAAGCCTCTTCTGTGGTGATCAGTCCAATAGCTTGGGCAATGTTTATCTTCTTTTTGATGTAGTCATCATAGAACCGCGGTTTATCCCTCAGCTTCTTAACTGCGTCTGCAATTAGCCCCAGAACTTGATCCTCTGCAACTTCCTCTGTAATGCAAGCCGTACAAGTATGAAACTCCGCTTCCCATTGAGAGCAGTCATTGATCTCCAGTACATATTTCATTTTTTGTTGTCGTACTGGAAACCTGTTCAGTTCATAGACTTCCTTCATTGCATCTCTGAAACTCATCTTTTGCTTGGTAACCCGCTGCCAAATCTCAAAATATACATCATCTAGCTCCTTAAAAAAACAAACATCATAGTTCATGCTAGATACAAATTCCTGGCAGTAATCTTGGGGAATCCAGTAGCTATCTTAACTGCTTGGTAAAGTCCTCTGTTGCTTACTCTTCCCCACTTAAGAGATGGCCGCTCAAGTAACACATAATCTTCCATCCACTTAAGTTTCTTTGATAATTCACCATAATATTTCACATACTGTTTTTCAACATCATATGTATTAAAATACATATGATATTTATCCCAATTGGCATACATGCAACCATCATTTTTAATGACTAGACGTTGATAGTCAACAAGTGCAGCAAGCTTGCAATACTCAGGGTGGAAGTACCAAACAAATATGTAATCAAAGCACTTAAGAACCTCCCAGAGGACCTCATCATCAACAGAATCAAGTGTGCCATCATTTTCAAAGCATATAAGGACCTCCTCCAGCTGCTTAGACATGTCAAAAGGGTATTGATTTATCATTTCATCATGGTCCAGCTTACTCCTAGTTCCAGACACTTGCTGTAACGACTTGTAATACTTCACACGATACAGTTCATGGAGTTCATTTTGAGCATCGAGCTGATTGAAATCCAATTGAGTAGAAGTATCAACAGGAGAGTCTTGTTCTTGAGGCAGCTGGCGCAAGTAACCACGGAACTTGTCAGTGCTAATATCTTCTCCCAAACCCAATTCATTCAGCTCCTGAGTGAGAAGGTTGGCTTCCTCCACATTTTTCTCCATGGTAGCATCATTGCATTCGGTTGCGATTGCAACTGGAACGCTGTAATCTTGTTCGGTATCATCATCCTGGTCTGCAGGACTGTTGAGGGCCTTAGAAAAACGGAAGCTTTTTTTCCTCCTAGGTGGAACCCATGTCTTCTTCTTCTTGGCCTGCTTGTTGTGTGGCGCCGCCTTCTCTTGGGAAGGACCAGAGAGGCCAGAAAGCCCCGGGACACACGAATCCATTACATCATCATCATCGTCATCAAGTTCACCTAGCACCGCGAAACGACGACCTTTTGGAGTGGTCGAGTCAATACCAGCGGATACGTCGACGATGTCGTTGATGGTTGACACGGCCAAACGGCGCAGATTTGGAGTCGTCTTCTTCTCTGAGGCGCCGATGGCCGGCATGTTCTTCCCGCTCGGGGGCGGCGGCCCGCGGCTGGACCCGCGGTGCTTGGGCGGCATCTCTCCAAACCCAAACTAGATCGATCTGGAACCCAGGGAGCGGGAGCGGGAGCGGGAGAGGCGGCGGCGGCGGAGGAGGAGGGGAGGGGAGGTGGGGCGAAGAAGACGATTGGTTTGGGAGCTCAAATCGCCAAGGGTGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0057600.1 | 1 | 42753330 | A | G |
| Osa01LNT0057600.1 | 1 | 42753864 | G | A |
| Osa01LNT0057600.1 | 1 | 42754213 | G | A |
| Osa01LNT0057600.1 | 1 | 42756458 | A | G |
| Osa01LNT0057600.1 | 1 | 42756180 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0057600.1 | osa-miR5802 | Translation | 4.0 | 18.227 | 1 | 24 |
| Osa01LNT0057600.1 | osa-miR395f | Translation | 5.0 | 5.289 | 1 | 21 |
| Osa01LNT0057600.1 | osa-miR169i-3p | Cleavage | 5.0 | 18.021 | 1 | 22 |
| Osa01LNT0057600.1 | osa-miR171e-5p | Cleavage | 4.5 | 19.76 | 1 | 21 |
| Osa01LNT0057600.1 | osa-miR395w | Translation | 4.5 | 5.674 | 1 | 22 |
| Osa01LNT0057600.1 | osa-miR1846e | Cleavage | 4.5 | 20.225 | 1 | 20 |
| Osa01LNT0057600.1 | osa-miR5075 | Cleavage | 2.5 | 21.918 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0057600.1 | 1 | qRNd1 | Resistance or Tolerance | Other soil stress tolerance | RG236 | C86 |
| Osa01LNT0057600.1 | 1 | nan | Morphological trait | Root | RM1387 | RM1067 |
| Osa01LNT0057600.1 | 1 | ph1 | Morphological trait | Dwarf | RG236 | C547 |
| Osa01LNT0057600.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RG810 | RG331 |
| Osa01LNT0057600.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RG810 | RG331 |
| Osa01LNT0057600.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RG810 | RG331 |
| Osa01LNT0057600.1 | 1 | fla1 | Morphological trait | Culm/leaf | RG810 | RG331 |
| Osa01LNT0057600.1 | 1 | nan | Resistance or Tolerance | Other disease resistance | RG109 | RG236 |
| Osa01LNT0057600.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ14 | R117 |
| Osa01LNT0057600.1 | 1 | qHID-1 | Morphological trait | Seed | RG810 | RG331 |
| Osa01LNT0057600.1 | 1 | qTGW-1 | Morphological trait | Seed | RG810 | RG331 |
| Osa01LNT0057600.1 | 1 | nan | Physiological trait | Eating quality | RG331 | RG810 |
| Osa01LNT0057600.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ14 | R117 |
| Osa01LNT0057600.1 | 1 | qPH1-1 | Morphological trait | Shoot/Seedling | C86 | RG236 |
| Osa01LNT0057600.1 | 1 | qBMS1-2 | Physiological trait | Source activity | RZ801 | RG331 |
| Osa01LNT0057600.1 | 1 | qHID1-2 | Morphological trait | Seed | RZ801 | RG331 |
| Osa01LNT0057600.1 | 1 | qTGW1-3 | Morphological trait | Seed | RZ801 | RG331 |
| Osa01LNT0057600.1 | 1 | rrw1b | Resistance or Tolerance | Other soil stress tolerance | C86 | RG236 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)