© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0060500.1
ACGACAAACAGTAAGAAATTCAGCTAAAATCACATAAACCTGGGGTGTTGTCCAACATTCCCGATCACCCGATGAAACTATATACGAAATAATCAAAGTACGAGGCAAGCAATTAATTCTAGGTGAGAACTCGCATTTTTATTGAAAAATACTAGCTGCTACTGTACAAGACGAGCGTTGGTGATCCACCCCAACCCATCGGCCAAACATGGCACATAATTACATTGAATATACATATATATCTTTTATTTTGTTTTCTTGTCTTCTTTATCCTTCTCCACGACTACTGGAGCTGCAGGAATGCTGAACCACCACTCTCTTAACCTTCTGGTCCACCTTTCTGTGCTTGCTCTCCTTGGTGGGGAGTGGTTCGTGAATGCCTCCAGAAACATCATCAGGACAAGCAACCTTGTGGGCACGAATGCAAGGCTCAGAGCCATCACTACCAAGGCAAGTATAGCTCTATCAGTAGCCTGGGAGGGAAAAGCCAACAATAAAGCTCTAATCTTCAGAAGAACAATATTTGCATCCTGAACAAGCTCTTCAACTTTGGAAATAGCATTTTGAACAGCTAAGAGCTGCTCCATTGTGTTCATTGGAGGTGGAGATGTCACTTTGACCTCCGTCATTGGTTTTCCATGGCTAGTTAGTCTTGTAAGGAACATGAAAGCTGCCGAAAACAAGAGCACCAAAACAAGAAAATAGACTAACCACCCCCTGATAATGATATAAGACGATGAAAAGCAAAATACCATGGACTTAATTGGCTCATCCCAAGATGCCAGCAACACCAAAAACCTCCATAGCTCACTTACGGGAGATAGCAATTCCTTCATCACTGCCAAGTTTGTATCCAGGCCATCAACTTTGACTCCATCAACTGTGGCTTGGGCCAATTCAACCTTCTTATAGTTGTTCATTGACTCATTAACTACCTTCTGCAAGGCACTCATTTCCCCAACAACTATCTCGCCAACAAAGAGTCTCTCACCTTTATTAATTGGTGATACCACTCCAAGATTCGACAGAACAGTAAAGGGGGACATTGAATGCCTTCCACTGCTAGTGCCAGGTTGGTTAACTTGAGTTGATCTTCTCGATGATATAGAACCAGCTAGTGTTTCAAGTATTACATCACCTCCGGGAAGTTTGTCACATAGATTAAACATCAAAAGAGACTCGAATCGATTAGAAACTGGAATGGCTAACTCTTCAATAGCTTGTAGCCGCATAATGCTTAGTACAGCCTTCAAAATTGTTTCCTCTTTGTCAACTCCACTTATGTCAAACTTCCTAACAAATCTGTGGACATAGAGAATTTCTGATATGATGGCCAGCCAATAGTCACGACGAAAGTGGCCAGCCAACTCTGGAAATTCTATGATCACTGGTTCTGTTAAAGTTGTTGATTTATACATAACAGCTTTGTCAAATAGCCGTGAGCCCCATGGACCAGTCAGCTCAGGTTTAACAGACTGCTTTAGATCTTCGGCAAGCTCATAAGCTTTAGGCTTATCATAGGTCACAACCCGAAGTGCTTCGAAGTAAAGAGCATGATCAGTAAGTGTTAACCTTCCTGGCCATGTCGAAATCCCAACATGTTCAAGTACTGGTTGAGTCGTCAATGTTCCATCTACTTCTACAATCCTTTCTCCTCTCTGAGACCGCTGGGCAGATAAAAGCGAGGACTCAGATTGTCCTTTCATTTTCTTAATTGCTCTACATGAGGTAAAACATACTCTCAGTCCTGTCCAATCCTGTAAGGTACTTATCATATACAGGAAATGTAAGCCGGCCTCCACTTGAAGATGAAAGTACATCAAATAGATTTGAACATGTTACCACATCAGTGATTGTTGGAATTGCAGGTGCTATTCTTGAAAAAGCCTCTAAACTGACTGTGTTGTCTACTTCAACCTTAACAGTGAGCTCGCTTGAAGAAGAGGGAACTTCCCAAGCTAGCATCATATCAAAATTTAGGCGACGAAAGCTTTTGTCAGAAAGATACCCTGCAACTTGTGAGGCATGTGCAAGTGCCCTCAAACAACAATATTCCAAAAAATTTCTTGCATAATTTCTTGGCTGCTTTATGGAATCAGATGCTTGCATATCAAAGTCATACTGCAGCTCATCCGTGGAAGTACCAAGTACCCGGGAGCAGCGAGAGACGACGGCGTTGGCCTTGGGGGAGAGGCCGGAGATGGAGGGCTGCTTGCCGGAGGAGGAGGAGGAGGAGCTGTCGGGGTCATCGGCGTCGTCCACCGGCGAAGCCCCGCGGCGGGGGAGGGCCCAGCTGAAGGAGCCCTCCCGCACGAGGCCCTCGAACCCCTCCATCAGCAGATCCCGCGTCCGGTTCATCATCGCCATCCTCACCTCACCTCACCTCACCTTACCTCAACAGGGGTCGGTTGAATGGTGGAGCGCCGGATCAGTTGCCAAGCAAGAGAACTGGAGAAGGCGCCGCGCCAAGCCACCAAGCCGGCAACCCGCAACCGGCGAGGCGGCGACCCGAGGAGTCGCTCCGTCGCGGCCCCCGGCTTGGCGGCTTGGACGGTGGGGACGGAGCGGACGGCGGCGGGGACGGTGGGGAGGCGCGGCGCCGGCGTGGACAGCAGGGAGCACTGGAGGCGCGCCTGGTGGTGGTGGACTGGACTCCCTCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0060500.1 | 10 | 1731787 | T | C |
| Osa10LNT0060500.1 | 10 | 1729475 | A | G |
| Osa10LNT0060500.1 | 10 | 1736562 | G | A |
| Osa10LNT0060500.1 | 10 | 1729516 | G | A |
| Osa10LNT0060500.1 | 10 | 1730123 | A | G |
| Osa10LNT0060500.1 | 10 | 1730369 | A | G |
| Osa10LNT0060500.1 | 10 | 1730377 | A | T |
| Osa10LNT0060500.1 | 10 | 1730903 | T | C |
| Osa10LNT0060500.1 | 10 | 1733776 | A | C |
| Osa10LNT0060500.1 | 10 | 1733927 | C | T |
| Osa10LNT0060500.1 | 10 | 1734103 | C | T |
| Osa10LNT0060500.1 | 10 | 1734221 | T | C |
| Osa10LNT0060500.1 | 10 | 1732165 | G | A |
| Osa10LNT0060500.1 | 10 | 1734939 | A | G |
| Osa10LNT0060500.1 | 10 | 1735408 | A | G |
| Osa10LNT0060500.1 | 10 | 1736914 | C | T |
| Osa10LNT0060500.1 | 10 | 1736921 | T | C |
| Osa10LNT0060500.1 | 10 | 1737631 | C | T |
| Osa10LNT0060500.1 | 10 | 1738049 | A | G |
| Osa10LNT0060500.1 | 10 | 1738243 | A | G |
| Osa10LNT0060500.1 | 10 | 1739201 | G | A |
| Osa10LNT0060500.1 | 10 | 1739978 | A | G |
| Osa10LNT0060500.1 | 10 | 1740012 | G | A |
| Osa10LNT0060500.1 | 10 | 1730743 | A | G |
| Osa10LNT0060500.1 | 10 | 1731817 | G | T |
| Osa10LNT0060500.1 | 10 | 1732322 | A | C |
| Osa10LNT0060500.1 | 10 | 1732399 | T | C |
| Osa10LNT0060500.1 | 10 | 1732515 | C | T |
| Osa10LNT0060500.1 | 10 | 1732610 | A | C |
| Osa10LNT0060500.1 | 10 | 1730565 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0060500.1 | osa-miR5544 | Cleavage | 4.5 | 6.56 | 1 | 22 |
| Osa10LNT0060500.1 | osa-miR1440b | Cleavage | 4.5 | 19.809 | 1 | 21 |
| Osa10LNT0060500.1 | osa-miR396b-3p | Cleavage | 4.5 | 15.456 | 1 | 20 |
| Osa10LNT0060500.1 | osa-miR396e-5p | Translation | 5.0 | 16.388 | 1 | 21 |
| Osa10LNT0060500.1 | osa-miR535-3p | Cleavage | 4.0 | 22.562 | 1 | 21 |
| Osa10LNT0060500.1 | osa-miR2092-3p | Translation | 5.0 | 19.894 | 1 | 22 |
| Osa10LNT0060500.1 | osa-miR2864.1 | Translation | 3.5 | 10.496 | 1 | 21 |
| Osa10LNT0060500.1 | osa-miR5338 | Translation | 5.0 | 13.264 | 1 | 21 |
| Osa10LNT0060500.1 | osa-miR5338 | Cleavage | 5.0 | 11.886 | 1 | 21 |
| Osa10LNT0060500.1 | osa-miR5484 | Translation | 4.5 | 23.119 | 1 | 21 |
| Osa10LNT0060500.1 | osa-miR396a-3p | Cleavage | 4.5 | 15.456 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0060500.1 | 10 | hwd1 | Physiological trait | Lethality | nan | nan |
| Osa10LNT0060500.1 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)