© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0004200.1
GGGAGTATGTGCATAGGAAGGGAGGCAACAACACACAGCTAGTTAACAGATAGTAGCACGCAAATTTTGAAGACAAAAACACTGGAATCATTTCCCCCTAATAATCACTTAGGTAACAGATCGTAGCAGGCAATGTGGGCGAATGCTTAACATACTGTATCCCATTTCATTCTAACTTCACGAATCACACCCAATGACTCGAGTCACCTCTCACTTCAACACAAGATCTTACAATAAGACATGCTGCATTCCTGTTGCTTACCTGTTTAAACACTTTTTGGAAGGACATGATACCCATCCTCCATCATCCTGAAGTGATTATCCTTGTCTAGCTTGTTCTTGATTGGTGTATCAACCACTATCTTTTGAACACAAAGCCTTCGGAGAACACGATGTTCAAGCATAACTTTATACTGAACATCACTGTTGTTCGGTGACACACTTGCTATTATCTTCTTCTCAATCCCCACCTCCTCTCCAACGAAAGGTGAATGGAACATAAAATTGCTTTTGGAATGATCAACATCAGGAATCTTGTTCCTCAAATGCAATGGAGTACTGAAATCAACACAGGGATATTCTATCTTTTCCCTTTTTACACATTCAGTATGAGCATGAACCTTGAGCATTTCTCTTGAGGTTTCCTGAAGACAACCCAAGTTTGCAGGAACTTGTGTCGCTAATGATGTTTGCTTCTGCACTCCAGGAGGATTAGTCACTTCTGATCCATCAGAACAGGTTTCAGTTTCTCTCATCTCATTTCTGTGATCTGGATATGCTTGAGGTGTTTCTGTCAACATTTTTGTTTCTGGCTTCGAGAGCTTCTCAATTCTGTCTTCATTCTTGTCACTATTTTTTCTTGTTAACAGATCGGTCAGTTCAATATCTCCCTGAAAAGTGCCATTATCAGCAAGGCCATCCTCCCAAAATGAATTTAGTCTGGAATCCTGAAAATCAATACCAGGACTGAAACCTTGGAGTAATGAATCCTTGCCAGGCTGCTGAGCACATGAACTGTGTTGACCACCTACATTCTGTCTAACAGAACTCACAGATTTGTTTGGAAGAAACATGTCTGCATTTTGGTTCTTGGAGGTATCTAAATTATCTTCTTTCCGTTTGTCAACCTTCTCTGCCAAGAAAGTACTCATATCAATGTCACTCTGAAGACCCATGGAACAGTTTGGTTTTGAAAATTCAATTCTATCGCCAAATATATCTGAAACAGAACTCTGTAGGTGAATGTCATCATCAAAAATGGCATTGTCAGGTCTATGAAACACAGGAGAAACTTTTGAAGCTGGCCTCCTTTCAGGTGAACTTGACCCTGCAGTTTGATACGTGCTCATTTCTGATGCAGAATTGAAAGGCTTATCCTCATGCAACACAGTGCAACTTGATGGGTTACTTAATCCAGTTTGACCCTTCCAATGGGTAGTAGGAGAAGTAGAACCCCAATTGGAAAACTTCTCCTTAAGTGATAAACGACAACTTGGTTCTCGAGTTCTCTGTTTCTCTGTAGCCTTGTCTGACCAATATCCAGCTTCAAGATTATTCTGATCATCTGTTCTTTTGTGGTGCTCTTCCAGATTGTCGAATAGTGAAACTCCATCAAGATGTGCATCCATTTTTGGAATATCTAAGTTATCAAAGCTTATGTGGAAGTCATCCTTCTCATTCATTTTATTCTCTTCACATTCTACCGACAGTGATGGTTTCTTGCAGGATCCATCCTTCATTACTGCAGCTGATGAGCATGATTCTTCGCTCCGTGGACTTCTCCTTTTCTCTGAATCGTCTACCATATCGAAAGACCAAGCAGAAGGACCAAATGTGCTGTTTAAGTTGGATTTTTTCTTAATTGGTGGGTGCCTTTCCCAGTCAAAAAGTACTGTATCGTTGCCATTGTCCATCATCGATTGATCAGAAAAGAGGTCATGTGTTGCTGATGTCTCAAATCTTGTGTTAGTTCTTGTTGAAGTTCTTTGTTCTGGAGAGTATCTATCTTTAAAACCATAATCACGTGTATCAAACTGTTCCACTATTGGAGTAGGAAAACGATCCTCTGAATTAAATGGTTCCATCTTCCACAATCTCTCAGAATTTTCATCAGTTAAATTATCATCCAACCTACCATGCTTTGATCGCCAACATTCTTCAGCTTTTGTTTCACAAAACATGTCTTCATCCTCAGGAAAGAATTTATTATTGTGGTTCTCAAATGAATGTGGAAAATAACAGTTAGACTGTTTGCTTCTTTCATAGCCTGATTCATCTAAAGGACAAGTCCTCTTTTCTGAAAATCTTCGCTCTTTCAGCACGTTGATATCATTTATTATAGAATCCAATTGCTTTGTCGCATCAAAGGGAATATACCTTCTAGCTTTGTTCTGTGTGTACCGCATGACCTTGGGAGGCAAAGGCAAAGTCCTTTTGGTGGATCTTGGTGATTGAGGAGGTGTTTCCATCTTGACATGGCCAAGGCCTTTAACAGAAAACGAAACATGAGCTTCACGGGCAGGTCGTGCAGTAGATTTATTATTTGGTCCCTCATCACTGACCAAATCAAAAAGTGAAATTTCATTATTGAGTTCCACATTTGGATTTTGTTTCTTGACACTGTTGCTTTTTGGTGGGGGTATTTTGCAACCAAGCGGTTCCTTGTATGGGTTAGCAGAAGCTGCACCATCGTGATGGTCAGAGGATGATGACAATCTTGGCTGAGAACATGGTTCCTTCAGATTGCTGCACGCAGAAGTGATCTTCTTTAGTCCCTCTATAGGAGAAGCACTTAAAAGAGTGCAATCCAGTGGTGGAACAACATTATCTACAGTTTCAGGGCCACTGCTATGACTAATTGGGGTTGCCAGATTGTTCAGGTTTATAACATCAAGCGATCGAGGAGCCTGATCATGATAAGCTTGACTGCCAGTGCCTGATACATCAACCTGGCTCTGTACTCCTGGACTCTGCTGTTGCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0004200.1 | 1 | 3462709 | A | G |
| Osa01LNT0004200.1 | 1 | 3456856 | A | G |
| Osa01LNT0004200.1 | 1 | 3457385 | T | G |
| Osa01LNT0004200.1 | 1 | 3458212 | C | T |
| Osa01LNT0004200.1 | 1 | 3458277 | C | A |
| Osa01LNT0004200.1 | 1 | 3458693 | G | A |
| Osa01LNT0004200.1 | 1 | 3458702 | C | T |
| Osa01LNT0004200.1 | 1 | 3458731 | C | T |
| Osa01LNT0004200.1 | 1 | 3459352 | A | G |
| Osa01LNT0004200.1 | 1 | 3459911 | T | C |
| Osa01LNT0004200.1 | 1 | 3460216 | G | A |
| Osa01LNT0004200.1 | 1 | 3460380 | G | T |
| Osa01LNT0004200.1 | 1 | 3460533 | T | C |
| Osa01LNT0004200.1 | 1 | 3460666 | T | C |
| Osa01LNT0004200.1 | 1 | 3460954 | G | A |
| Osa01LNT0004200.1 | 1 | 3462393 | A | T |
| Osa01LNT0004200.1 | 1 | 3462494 | A | G |
| Osa01LNT0004200.1 | 1 | 3463264 | T | G |
| Osa01LNT0004200.1 | 1 | 3464018 | C | T |
| Osa01LNT0004200.1 | 1 | 3458050 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0004200.1 | osa-miR5526 | Translation | 4.5 | 9.088 | 1 | 21 |
| Osa01LNT0004200.1 | osa-miR5816 | Translation | 5.0 | 17.965 | 1 | 24 |
| Osa01LNT0004200.1 | osa-miR5818 | Translation | 5.0 | 20.923 | 1 | 21 |
| Osa01LNT0004200.1 | osa-miR7693-3p | Cleavage | 5.0 | 15.28 | 1 | 22 |
| Osa01LNT0004200.1 | osa-miR399k | Translation | 4.5 | 23.194 | 1 | 21 |
| Osa01LNT0004200.1 | osa-miR164e | Cleavage | 4.5 | 12.837 | 1 | 21 |
| Osa01LNT0004200.1 | osa-miR1426 | Cleavage | 3.5 | 15.125 | 1 | 21 |
| Osa01LNT0004200.1 | osa-miR1865-3p | Translation | 5.0 | 19.221 | 1 | 24 |
| Osa01LNT0004200.1 | osa-miR2091-3p | Cleavage | 5.0 | 16.405 | 1 | 22 |
| Osa01LNT0004200.1 | osa-miR2095-5p | Translation | 4.0 | 4.971 | 1 | 22 |
| Osa01LNT0004200.1 | osa-miR2099-3p | Translation | 5.0 | 21.246 | 1 | 20 |
| Osa01LNT0004200.1 | osa-miR2122 | Translation | 5.0 | 21.067 | 1 | 22 |
| Osa01LNT0004200.1 | osa-miR2122 | Translation | 4.5 | 13.744 | 1 | 22 |
| Osa01LNT0004200.1 | osa-miR5507 | Translation | 5.0 | 10.542 | 1 | 21 |
| Osa01LNT0004200.1 | osa-miR5521 | Cleavage | 4.5 | 17.06 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0004200.1 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0004200.1 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0004200.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Osa01LNT0004200.1 | 1 | gp1a | Morphological trait | Panicle/flower | RM1 | R753 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)