© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0004400.1
GCTCAAGATGGTTTTATTGACAGAACACAGGAAAGCCATGGTTATGATTTAATATACCGTCATTACATGTATATAATAGATTTATAGAAAAGAACAAGGGTATCCAGAGAGACACTACCAAACTCATTAACAACACCTGTTGACTGTAGTTGCATGTTTTCACCAAGGGTAAGCAACTGAGGGCAGGCAGCAAACCAACCTATAATTGCCTGTTCAGTTCTTCCAGTTCCAGGCCATATAAAAATCTGAAGAATTCCGAGGTTGTGCGCAAGCAAGCATATTCAATAGTATTATACACAGACTGAGAAATGAGAACATCGAGCACCAATGATGCGCATCACAACTTATCGACCGAACCATCCTTTCTGGGGCTGCTGTACATCGCTGTCGTTCATCAGCTTGTCGAGCACCACGTTCAGATCCACATTCTGCCCATTCTCGGTCAGCCTCCGCACAGTTGCCCTCACTTGCTCTCTTGAGAATCCCATTGTTGCAACCTTCTCAACTACATCATCAACCGGCACCCTGTTGCCAGAGGAACCACTTGGGCTGGAATTGATAGGCACTGCTTGTGGTAGTATTTGGGCTGTGGGGAGCCTGCCATAGTTGCCACTTCCCCCAGATGATGGCCCTGAGGGAGCAAAAGGTGAGGGTGACGACTTCATCCCTGCATTGCCACGGTGTGAAGGGGATCCGCTGTAACCATATGATTCAGAGAAACCACTTCCTCCCTGTGGCCCGTACCCGCCAGCACCATAGGACGGTGGTGGGCCAGAGTTTGGCCTGCCCACAGGAGGTTCATACATGCTTTGGTTTTGCCCATAGAAAGGAGGGGCAGGTCCACTAGGCGGTGGCATATAAGGTGAAGGAGGGCGGACATTTGGTGGATAGCTCTGTGGAGGTGCATACGACATGGCTTCTTCTGGCTGCTGGGGTGCAGCGGGTGGGAGTGGGGTCGAAGGGTTAACCATTCCAGACTGAGGCGGTTGTGAATATTGAGGAAATTGGGGTGGGGTTTGGTACTGCTGAGGCGGCGCTGGGGGTGCCTGTGGCTGTGGAACTGGAGGGGCCTGATACTGCTGGTGCATGGTTTCAGTCGGCTGAGCAGGTGGAGCATAGTAGGGATCCCGTGGTAAAGCTGGCACCGAAGGAACTGGAGCAGAAGGAGGAACCGGTGGTACTTGTGAATGTGGCAGATGGCCTGGATACTGTGATGGAGGTTGGCTTTGAAGCGTTGGAGGTGGAGGAGGCGCATTTGGAGCAGGAAGGGCAGGAAGTGCTAGTGGTTGTGAAGAGGTGAGGGCTTGATGCTGTGGTTGAATGGCTGCCTGCTGTGGAGCTACTGCATGCTGGTGCGAATCTGTCTGAGAAGATCCAACATTATCTGATGCCAGGGCATCAGACTTGGGTGGCTGGAGCTTCGCAAGATGGAGCTGTGTCTCAACAATTTCCTGTTTGTCACGCAAAATCTGCACACCAGCTTGGACCTCCCTCAGCATGTTCTCGAGCTGCCTTAGTTTTCCATCAGTGCTGCCATTATAGTTGCCGATTGTTATCTTCAAATCGTCAACAGAATTTTCAAGATGGTGTGTTCTACCCTCCAGCTGTGAAAGCCTTGAACTTACACCTTCCAGTGCATGCAATAGGTTATCAGAATATTTCTTCATGGTTCGATCAATGTCTGCCATGGTAACCGTGCCGAAATTACTCCTGTCCTCCTCGTGGCTAACTTTCTTTAGCACATGGGGCTCCAATACGCCAGCACTCTTCCCCACATAAGAAAATTAATGAGTATGGGTATTGATGTCATTAAACACAGCCATCAATCACGAACAGTTGATTAAGAAAACTATGAAGAAACTCGCATGAAAAATTGAGGGGGAAAAGGGAGAAACTCATATCCATACACATGAATAGTTTGTTGACAAACAGCAGTAGTCACATACACACATGATGCTAACTAATTAAGAGCAATTAAATACAACAAATTATGGTTGATAATAGTGCAAACGAACTAGCAAATGGGACATATGGAGCACTATAAATTTGCATAGTTTGGATGCCAGATGTGCTCAATATAGTTCAGTCATAGCTTAAAAATACCTAATAGTAGTATATCATATACGTCAAAACACAATAGTCATCGTCACATTCACATACCTGTATGGTCTTTGCATAAGATCCTAAGCAATAAGTTTCACAGCAAAAAACATAATTAGACTAGCAACATAAGAAGACCTGGCTATAAAAATGTGCATGAACAGAGAGTCTCATGCGAATTCGGCTACTAAAAATGTGCATCTCAGTTAACAGTTGACATAGTTACAGTGTAAGTATATACTAGCACCCTCAGAGAATTGCAAGTGTGAGTATAAAAAAAACACATATAGAAGTTCCAAACATCTTTTATCATCGACAAAATTCTCTTGTAGCTTATTATTACCAAGTGATTATGCGTCTCAGCACGGTGCACAAGCCCAGTTCGCAAACAAAATTCTTCTTCTTACTAATGTAGGGTTGAGTTGTAGATGCTCATCTACACGAAAAAGGTTTTCGCGATAGATTTACTGATGCAAAATCATGAAACGCAGATAGATCGACAGATCTAGCGGTGGGGAGACCATACCACGATCGAAACAATAATTAAGTATACCTTCAAGTTGTAGGACGCGGAGGCGGCCTTGGAGCCGGAGTCGAGGGACCCCCACGAGGCCGGCGCGGCGGAGGCGGAGGCGGCGGCGGAGGGGGCGGTGGTGCGGATGGGCTGGAAGTCGTAGCTGGGCAGCACGTCGTCGGCGCTGCCGTTGGAGGAGCTGTGGCGGCGGCGGAGGCGGTCCTCGCCCTCCTCCTGCGGGTTGGGGCTCATCAGATCGAGGAGCTCCGGTCCCCCGCCACCGACGCCGACGCCGGAGGAGGTGGAGGCGGAGGCCGCGAGGCCGAGGATCTGCTTGTCCATGAACTGCGACGTGTTCATCGGCGCAGCTCCGCCTCGGCGGCGGGCGGCGAGGTGGGGCGGCGGTTGGTTGGTGGAGCTTGGGAAGGGAAGCGAGCTGGGAAATG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0004400.1 | 1 | 3593447 | T | C |
| Osa01LNT0004400.1 | 1 | 3592506 | A | G |
| Osa01LNT0004400.1 | 1 | 3592770 | A | G |
| Osa01LNT0004400.1 | 1 | 3593182 | T | C |
| Osa01LNT0004400.1 | 1 | 3593833 | C | T |
| Osa01LNT0004400.1 | 1 | 3594065 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0004400.1 | osa-miR5789 | Translation | 5.0 | 15.361 | 1 | 21 |
| Osa01LNT0004400.1 | osa-miR5820 | Cleavage | 2.5 | 18.827 | 1 | 21 |
| Osa01LNT0004400.1 | osa-miR399k | Cleavage | 5.0 | 20.24 | 1 | 21 |
| Osa01LNT0004400.1 | osa-miR160f-3p | Translation | 4.5 | 19.96 | 1 | 21 |
| Osa01LNT0004400.1 | osa-miR416 | Translation | 5.0 | 15.258 | 1 | 21 |
| Osa01LNT0004400.1 | osa-miR419 | Translation | 3.5 | 19.692 | 1 | 21 |
| Osa01LNT0004400.1 | osa-miR390-3p | Translation | 4.5 | 21.078 | 1 | 20 |
| Osa01LNT0004400.1 | osa-miR1426 | Translation | 4.0 | 11.239 | 1 | 21 |
| Osa01LNT0004400.1 | osa-miR1426 | Translation | 5.0 | 19.838 | 1 | 21 |
| Osa01LNT0004400.1 | osa-miR1857-5p | Cleavage | 4.0 | 19.123 | 1 | 21 |
| Osa01LNT0004400.1 | osa-miR827 | Translation | 4.5 | 20.608 | 1 | 21 |
| Osa01LNT0004400.1 | osa-miR1846e | Cleavage | 5.0 | 17.475 | 1 | 20 |
| Osa01LNT0004400.1 | osa-miR2928 | Translation | 3.0 | 14.966 | 1 | 20 |
| Osa01LNT0004400.1 | osa-miR5144-3p | Cleavage | 4.5 | 20.95 | 1 | 21 |
| Osa01LNT0004400.1 | osa-miR5805 | Cleavage | 4.5 | 13.703 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0004400.1 | 1 | gp1a | Morphological trait | Panicle/flower | RM1 | R753 |
| Osa01LNT0004400.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Osa01LNT0004400.1 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0004400.1 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0004400.1 | 1 | nan | Morphological trait | Root | RM7383 | RM243 |
| Osa01LNT0004400.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)