© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0063100.1
CTTCTCTCTTTTTCTAGTTCTCTTCCTCTCCCTCACGCTTCTCCCCAGCGCCGCCGCTCACACTGCCGCTCCTCCTCACGCCGGCCGCTGCTCCCTGCCTCCGGCAGCCGCCCCGCAGCCGCTGCCGGCCTGAATCGGTTCCGTGGCTCCTCATGAGTCTACCCCCCAAGCTAACCGTAGCCATCAACCCCTCACCAGTCTCCAATCGATTCTGCTGCTGGCTACTGCTCTCAATGACTGAGATTGAAATTTCCCAACCCCAGCGCCCCTGATTCAAGCGTGGCTCAGACCAGCCGTCTCTCCCTCCCCGAGCTCCTCCTCTCTGATCCCCTTCTATCCCTACTTCTGTGACGTGATCTGATTGGTTGTTCTCTTAGGTGGTAATCTACGATGAATTTTTATACTTGTGAACAGGTTCTAATAACCAACTGGATGGTGCTATTCCTGCTATCTGTAGGTTCTATATTATTTGATTTGCTATAATTGGATGATGACTATATGCTATGGATGAATGAGTGAATGCATGCTCAAATGAATCAAGTATGCGCATTTTTTTTAGTACTGATATTGAAATCACAAAAACAGGATTGGTCCTTTTTTATTCTTATGCAATGGTAATCAAGATACTGAATTTTCTACATGCCACTATACTAGCACAATCAGATCCTTATATCCTTATGCTGAGTAGTAATTCAGAGAATTAATTTGAATTCCTGCATACCAAATGCATCATAGTAATATGACTAAAATGATCACATGACCTAAAAACTATGCATCTTGATTTTGTTGTCAAATATACTGACTACTAAAATAACTGGTAATTAATTGTGTTCTATGTTATTGGTCTTAGCAAAGTTATGCTGATCAACTACTAAGGTTCAGATCCTAATGTTATGCTCTTCTAGGACTTATGATTAGGACTCATAGATTTCTGTTTATGGATCTACATTTATACTAAAGATGTACTTGTACACTTGCTATTCATCCAATCCTACAGATTCGGTATTACTATATGAAGAACTAAATACATTGGTGAGTTTTGAGACTGCTAGTCTGCTAGTATTTCTCACTGTGGCATACGATTTATATTGATTAATACTTACAGAACTAATGTATGTCATGCTTTAATCTAGAATCATATGCTCTAGATGCTCTGCTATAGAGACTTATAACCCTACTCATTAATTCTAACTATTTATAATTTCAGGATTCACCAAAGAGATGCATGTGCAGCTGTTTACCTAAATGCATTTACGTAATAATTCTAGACAAACTAAAATGTTTCTTGTTACTAACCCCAAATAATTATAAACTAGAATTAACCTATATTTACTTTTCAGTTAAATAAAAATATTTATGTCCTACTAGTTGCACTTCCTACTCTGCAGCTCAAATTACTTAATATTCTTGTTCATCTTCTAATGGATGCAAATGCAACTCACAACTCCTACACATACTAGTATATGCATCACTCAAGAATCATGTCATGATATGATTGTACTTTCAGTTTAATCTCTTGATTACCTGCCATGATTTTAGGTGACAATTATATGGTTCCCTTCTCTGGTTCTGCAGCTACTCTTCTGGACTCTGATTCAATGGTTCTCCCGATGGAACTGTGATTTCTCCTCTTTGAGCTGAAGCACCACCTGCTCCTCCAGAAACTGAAACCCCTCTCTTCTTGAAGCTCAGGTACCTCCTACTTGATTTGCACCCTTGCTACCGATTTCTTTGATTTCTTGTTCTTGCTGATTTTACCTCCTGATCCAATTTACAACAGTTGCCTCTTCTCTTCCTTTCTTCTTGTCCTGCTTCTGCTGTTACTGATCCATCTTGTTTCTTGAGCTGGAGTGCCATCTCCTCCTAGAGCTAAAATCCCTGTTCATGCAGGACTGAACACCTCTACTTCATCCAAGAACTAAATACCTTTGCTTCTCCTTCTTCAGATTTGGTTTCTCTCTCTCTCTTTCTTGTTGTTTCCCTGTGGATAATAGGAATGAGATACGGTGTAATTGTGTTGCTGGCTACTAAGCTACTGCTCTGCTATTTTTCTCTGTTTTGAGCTGGTTTTACAACCGAACTGCTGGCTGCTACTACTGCTGCGGCTGAGGATGCTGCTTGGGGTTGTTTTCCAGCCGATGCAACCGAGACTGATTCACAGATAGCTGGTTAATATATGTGTGAATTTTTTTTGTGAAGGCTGGGTGACTCACCTACTTTAGTTTTGGTGGTTGTTTCACTGACTGACACCTAAGCAGTGTTTGATCGGTGGTGTAATGTGGGATTTCACTAAATTTTTCTATTTAGATAAATTCTGATACAATTAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0063100.1 | 10 | 5253446 | T | G |
| Osa10LNT0063100.1 | 10 | 5254735 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0063100.1 | osa-miR168a-3p | Translation | 4.5 | 15.826 | 1 | 24 |
| Osa10LNT0063100.1 | osa-miR172d-5p | Cleavage | 4.5 | 12.874 | 1 | 20 |
| Osa10LNT0063100.1 | osa-miR415 | Translation | 5.0 | 14.668 | 1 | 21 |
| Osa10LNT0063100.1 | osa-miR528-5p | Translation | 4.5 | 5.084 | 1 | 21 |
| Osa10LNT0063100.1 | osa-miR814a | Translation | 5.0 | 15.964 | 1 | 22 |
| Osa10LNT0063100.1 | osa-miR814b | Translation | 5.0 | 15.964 | 1 | 22 |
| Osa10LNT0063100.1 | osa-miR814c | Translation | 5.0 | 15.964 | 1 | 22 |
| Osa10LNT0063100.1 | osa-miR815a | Cleavage | 5.0 | 7.0 | 1 | 21 |
| Osa10LNT0063100.1 | osa-miR815b | Cleavage | 5.0 | 7.0 | 1 | 21 |
| Osa10LNT0063100.1 | osa-miR815c | Cleavage | 5.0 | 7.0 | 1 | 21 |
| Osa10LNT0063100.1 | osa-miR1425-3p | Translation | 4.0 | 6.269 | 1 | 21 |
| Osa10LNT0063100.1 | osa-miR1879 | Cleavage | 3.5 | 11.599 | 1 | 24 |
| Osa10LNT0063100.1 | osa-miR2093-5p | Cleavage | 5.0 | 12.266 | 1 | 20 |
| Osa10LNT0063100.1 | osa-miR2093-3p | Cleavage | 4.5 | 12.768 | 1 | 20 |
| Osa10LNT0063100.1 | osa-miR2101-5p | Cleavage | 4.0 | 15.916 | 1 | 22 |
| Osa10LNT0063100.1 | osa-miR2922 | Cleavage | 5.0 | 5.957 | 1 | 20 |
| Osa10LNT0063100.1 | osa-miR5073 | Translation | 5.0 | 9.73 | 1 | 23 |
| Osa10LNT0063100.1 | osa-miR5078 | Translation | 4.0 | 17.417 | 1 | 21 |
| Osa10LNT0063100.1 | osa-miR5500 | Translation | 4.0 | 18.626 | 1 | 22 |
| Osa10LNT0063100.1 | osa-miR5522 | Cleavage | 4.0 | 15.24 | 1 | 21 |
| Osa10LNT0063100.1 | osa-miR5527 | Translation | 5.0 | 22.439 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0063100.1 | 10 | nan | Resistance or Tolerance | Other stress resistance | R1933 | R1629 |
| Osa10LNT0063100.1 | 10 | nan | Resistance or Tolerance | Other stress resistance | R1933 | R1629 |
| Osa10LNT0063100.1 | 10 | qRRE-10 | Resistance or Tolerance | Other soil stress tolerance | R2174 | R2194 |
| Osa10LNT0063100.1 | 10 | qPBN-10 | Morphological trait | Panicle/flower | RM216 | RM311 |
| Osa10LNT0063100.1 | 10 | nan | Physiological trait | Sterility | R2309 | RG257 |
| Osa10LNT0063100.1 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)