© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0064400.1
TACATTGTCCGAACAGTAAATTGACCATTTTGATGATAATTCCATCTAAAACAATCATTCAGTTGACTCAACTGAATATGCACAATAGAAGCACGCAAGTTATGCCAATTTGTTAAATTCTGACCAACCAAAGCTCTCCTAAAAGAAACATTCAACGGAACAGATCTCATAACATTAGCAATTGAATAATTCTTCCTTCGAACAATGGCATATAGAGACGGATACTTATCTTTAAAAGTCACGTTACCTATCCATTTATCTTTCCAAAATCTAGTTTGTTCCTCATTATTCACAATCCAGGAACCCATATTCAAGAAAGTATTTTTAACTTTCATGAGACCTGATCAGAAATGAGAATCCCCTGGTTTCCTATCAACTTGAGTTATAGAATGGTTAGAGAGATACTTCCTTTTCAATAAGTCCTGTCAAACCCCTTGCTCATTTATTAACTTGAACAACCATTTACTCAAAAGACATTTATTTTGGATCTCCAAATCATGAACACCTAAACCCCCTTGGTCTTTGGGTTGACAAATTATATCCCATCTTGTTAGTCTATATTTTTTCTTATGATCATCACCTTGCCAAAAGAAACGTGATCTATAATAATCAATTTTTTGAAGAACTCCCTTTGGAATCTCAAAAAAAGATATCATAAACATAGCCAAACTTGATAGAACAGAATTAATCAAAACCAATCTTCCCCCCACAGACATATGTTTTCCTTTCCAACTACTAAGTTTCTTCTTAATTCTTTGTTCGATAATCTTCCAATCTTTATTGCCAAGCTTTCTAAAATGCATTGGAATACCGAGATACTTAACAGGAAAAGAACCTAGCTTGCAGCCAAAGATATTAGAATATTGATCATTATATTTCTTTGCTTGACCAAAACAAAATAATTCACTTTTGTGAAAATTTATTTTCAAGCTAGACAACTTTTCAAACACTGATAAAATCAATTTCAAATTCTTGACTTCTTGTAAATCATGCTCCAAAAATATGATGGTATCATTAGCATATTGCAAAATAGATAAACCATCATCCACTAAATGAGGTATTACCCCACTTAACAGACCAGCATCTTTAGCCCTCTTAATTAGTAAAGCTAGCATATCAGCCACGATATTAAAAAGAATCGGAGACAGAGGATCTCCTTGCCTAAGCCCTTTATAGGTTTGGAAGTTATTTCCAACTTGATCATTTACTTTAATACCAACATGACCACCTTGAATGAAAGAAGCTATCCATTGACACCATTTATGTGAAAAGCCTTTCATCCTCAATGTCTGTTGAACAAAAGACCATTTAACTTTGTCGTACGCTTTCTCAAAATCAATCTTAAAGATTACACTACTATTTTTACGATGCAATTCATGTATAGTCTCATGAAGAATAACAACCCCTTTCATAATATTTCTCCCAGGAATAAAAGCAGTTTGAGTAGGGCTAATTACCTTTTGTGCCACTCCAATAATTCTATTAGTAGCAACTTTGGTAAAAATTTTAAACCTAACATTAAGTAAGCAGATAGGCCTATATTGCTGGATTTTCATGGCCTCCATACACTTAGGCAAAAGAATGATAGTACCAAAATTAAGAGAGAATAAAGGCAAAGTACCATTATGAAACTCTTTAAAAAGATCTAACAAATCAGATTTAATAACATTCCAAAAAACTTGGTAAAACTCAGCTGGAAATCTATCAGGACCCGGAGCCTTGTTATGTTCCATTTGGAAAATTGCCTTTTTAATTTCATCCTCAGTAAATGCAAGGTGGGCTATGCATTTCATTGTGCATTTTTTACTGCTTCATTATCATCTCTCTCTTGACTTATCTTGGATCATTATGTCAATACAGGGAGATCACTACCGCCAATGGCTCCACTGGGAGTAACATGGATTGCCCATTCTCAATGGAGAAGACATTGTCCAACATATGCAAGAGAACTTTTTATGATATCTTTGATTAAGCATGTGACATTTACTTATTCGCATGCTCATATTCTAAACTTTATATCAAACATGATTGCATTGGTTTCCAGTAGTCCATTTGTGTGTTGGTTAATAGGTGGAATACGGCGGGGGAGGGCGGACGGCAGTCCCGCGGCAGCGGCCCCACCCTCTACCTTTGACACTGGCTAGTTTGCCATCTTCCCCAGCGGTCGACGGTCGTGGAACATTTTCACTCTCAACAGGTGGAGAAACTGAATAGAATAGGTTTGATTTGGATTAGAGATTTTTAACCACCTGTAAAGAGGTTTATTGAGCCACGCTGCATTCAGTCACATTTGCTGTTTGTCCAATATTATCTGCTGAATGTTTATTTTGGTGAAGCTACTAGCTTGAATCTTAGTAATTCAACAAAATTTTGAATCTTGGTCTGTTAAGTTAATGTTCCTAATCAGTGAAATGGGGGGATTTTTGAGAATGCGAACAAAATAATCATATTTGTAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0064400.1 | 10 | 6133138 | A | T |
| Osa10LNT0064400.1 | 10 | 6132825 | A | G |
| Osa10LNT0064400.1 | 10 | 6133299 | A | T |
| Osa10LNT0064400.1 | 10 | 6134056 | G | T |
| Osa10LNT0064400.1 | 10 | 6132059 | C | A |
| Osa10LNT0064400.1 | 10 | 6132284 | C | T |
| Osa10LNT0064400.1 | 10 | 6132397 | A | T |
| Osa10LNT0064400.1 | 10 | 6132649 | T | G |
| Osa10LNT0064400.1 | 10 | 6132684 | C | T |
| Osa10LNT0064400.1 | 10 | 6132792 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0064400.1 | osa-miR166b-5p | Cleavage | 4.0 | 14.098 | 1 | 21 |
| Osa10LNT0064400.1 | osa-miR166d-5p | Cleavage | 3.5 | 14.098 | 1 | 21 |
| Osa10LNT0064400.1 | osa-miR166d-5p | Translation | 4.5 | 20.735 | 1 | 21 |
| Osa10LNT0064400.1 | osa-miR397a | Cleavage | 4.5 | 20.285 | 1 | 21 |
| Osa10LNT0064400.1 | osa-miR397b | Cleavage | 4.5 | 20.285 | 1 | 21 |
| Osa10LNT0064400.1 | osa-miR399k | Translation | 4.5 | 16.965 | 1 | 21 |
| Osa10LNT0064400.1 | osa-miR166h-5p | Translation | 4.5 | 14.098 | 1 | 21 |
| Osa10LNT0064400.1 | osa-miR1857-5p | Cleavage | 3.5 | 14.438 | 1 | 21 |
| Osa10LNT0064400.1 | osa-miR1864 | Translation | 5.0 | 9.799 | 1 | 24 |
| Osa10LNT0064400.1 | osa-miR1864 | Cleavage | 4.5 | 14.606 | 1 | 24 |
| Osa10LNT0064400.1 | osa-miR2120 | Cleavage | 3.5 | 17.802 | 1 | 24 |
| Osa10LNT0064400.1 | osa-miR5542 | Cleavage | 5.0 | 16.113 | 1 | 21 |
| Osa10LNT0064400.1 | osa-miR166b-5p | Translation | 5.0 | 20.735 | 1 | 21 |
| Osa10LNT0064400.1 | osa-miR397b | Translation | 5.0 | 9.136 | 1 | 21 |
| Osa10LNT0064400.1 | osa-miR166h-5p | Translation | 5.0 | 20.735 | 1 | 21 |
| Osa10LNT0064400.1 | osa-miR5822 | Translation | 5.0 | 12.476 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0064400.1 | 10 | nan | Physiological trait | Sterility | R2309 | RG257 |
| Osa10LNT0064400.1 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Osa10LNT0064400.1 | 10 | nan | Resistance or Tolerance | Other stress resistance | R1933 | R1629 |
| Osa10LNT0064400.1 | 10 | nan | Resistance or Tolerance | Other stress resistance | R1933 | R1629 |
| Osa10LNT0064400.1 | 10 | qRRE-10 | Resistance or Tolerance | Other soil stress tolerance | R2174 | R2194 |
| Osa10LNT0064400.1 | 10 | qPBN-10 | Morphological trait | Panicle/flower | RM216 | RM311 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)