© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0004500.1
GGTTGAGAATGCCATATATTATTATATTGGACTGTACAGTTTTCTCCATTGAAAAGAGCAGGAGACAACAGCTGACTCAAAGAAGCTGCTGTCTGAAAAAAATTTACGAAATATCATCTAACCCTGAACAATATGGTTTCTAGGAATTTACGGTGAGCAGCAGCTCCATATAATTTGCATTTGCAGGATGCAGCAGGAGGGAAATTGTAACACTATATATGTTCTTGTTTGCTACACGCAGGTGTAACTCTGAGGAAACCATCTTTCCAGCAGAGATTGTTTTAGCCTCATAACCAGGGCGAATAAAGCATAGCAAGGGAAATGCATCACTGCTACCACCAAATACCATACAGGAGCTTTAGGAAATGCTAAGTCCAGAAATGGGTAAGGCCACCAAATCGATATGCTAGCATGGATGAGCCACTGAACATTAACAAAAGCGCCAGTCCACAGCAAGAAATATGCGATTCTAAACCACGGGAAACGCAGGCTATTCATAGCAGTATCACCAATCATGAACACAACATTTATAGAGTGTGTCCCAATCAGCAAAAAATTCATATCATATTGATTGTAGGCAAGGAAAGGGTACAGGATAAACCAAAACACCAGATCTGTAATCATCACAGCACCTGCATTTGTCTGAAACATGATCTGGAACAGATAACCCCAAAATCCTGCAATTTCTTTGCCACCATGCATTTTACTGTAACAAGGATTTTTTATTGACTGATCATATACACTTTCCCCAGCTGGAGCAATGATATATGTGCCATGATCTGCACCAGATCTATTGTCGCCATTCTTGTATGAATACTGATAGCATCCATAAATTGAAAGCACCGAACCAAGCCCAAAATATAAGGTGACTAGCAAGAAGGTCCACTGAGTGTAGTATAGGAAGACACTCCATCCATCGACGACGACATCAACCGCAAGCAGGGAGGCTAAAATGAAGAAAGACACGACGCGGAACGCCAGCAGCCAGCCAGGGTGGATCTGCTCAAGGCATGGTTTCCAGCAATCTTCAAGGTACACAACCCCGGATGCGGCCCGGGGCGGCCGCGCATCCTCACTGTCCTCGCCGCCATCGCCATTGCCGTCCTGTGAGCTCGGCCCCTCGTACTTCCAGATCAAGAAGCATGCCAGGACCATGCAGGAGTAGACCCAGACCGCGCAGAGCATGAACCTCCAATTGAGCCAGTACTCCGAAGCAGTGGTGTCGACGGCCATGGTTGATGATGGCATTGCTGCAGTGATGAGGCGTTTCCAATCTCACCGGTGATTGGGTTCTTGTTCTTGACTTCTCCACTGCCTCTCCTTCTCCAACCTTCCTGCCGCCGCCGCCGCCTCCCTCTCTCCGTCGATTCCTCTCCCTCTCACGACCTCGACGCCTCCATCATTCGCTTCTGATTTGGGCGAGGCGAGACGACAGAGAGAGATCTCCAGAGTCAAGCCGCACGTTGACTCCTGCTCTCTCCGGAAGCCACGTGAATGAATCCCCTCCTCCTCCTCCTCCTCTCTCTCCTCCACCTCACTCACTCTCGACCACAAGGAACGAACAAACCGAGAAGAAGCCAACCATC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0004500.1 | 1 | 3696181 | C | T |
| Osa01LNT0004500.1 | 1 | 3696298 | A | G |
| Osa01LNT0004500.1 | 1 | 3696404 | G | C |
| Osa01LNT0004500.1 | 1 | 3696626 | T | C |
| Osa01LNT0004500.1 | 1 | 3696748 | G | A |
| Osa01LNT0004500.1 | 1 | 3696840 | C | T |
| Osa01LNT0004500.1 | 1 | 3697158 | T | C |
| Osa01LNT0004500.1 | 1 | 3697325 | C | T |
| Osa01LNT0004500.1 | 1 | 3697496 | A | C |
| Osa01LNT0004500.1 | 1 | 3698182 | T | C |
| Osa01LNT0004500.1 | 1 | 3698283 | A | T |
| Osa01LNT0004500.1 | 1 | 3698740 | A | G |
| Osa01LNT0004500.1 | 1 | 3698902 | C | T |
| Osa01LNT0004500.1 | 1 | 3698939 | A | T |
| Osa01LNT0004500.1 | 1 | 3699530 | G | A |
| Osa01LNT0004500.1 | 1 | 3699640 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0004500.1 | osa-miR5788 | Cleavage | 5.0 | 9.059 | 1 | 21 |
| Osa01LNT0004500.1 | osa-miR5805 | Cleavage | 4.5 | 17.829 | 1 | 24 |
| Osa01LNT0004500.1 | osa-miR5810 | Translation | 4.5 | 17.696 | 1 | 24 |
| Osa01LNT0004500.1 | osa-miR169f.2 | Cleavage | 4.5 | 17.853 | 1 | 21 |
| Osa01LNT0004500.1 | osa-miR444b.2 | Cleavage | 5.0 | 19.505 | 1 | 21 |
| Osa01LNT0004500.1 | osa-miR444c.2 | Cleavage | 5.0 | 19.505 | 1 | 21 |
| Osa01LNT0004500.1 | osa-miR1855 | Translation | 4.5 | 20.085 | 1 | 21 |
| Osa01LNT0004500.1 | osa-miR2926 | Cleavage | 4.5 | 20.244 | 1 | 20 |
| Osa01LNT0004500.1 | osa-miR2927 | Cleavage | 3.0 | 14.29 | 1 | 23 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0004500.1 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0004500.1 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0004500.1 | 1 | nan | Morphological trait | Root | RM7383 | RM243 |
| Osa01LNT0004500.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0004500.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Osa01LNT0004500.1 | 1 | gp1a | Morphological trait | Panicle/flower | RM1 | R753 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)