© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0066400.1
GTGCATACGATTTCCCAAATCTAGATCATAATACATTGCCGGTCATTATTTATTCCAATGGAACTTTGCAATGTCACAAATGTTGCAATTCACATCGTTTGAACAGTCTTTCGTGTGGCACCAGATGCATATCGGAGATAGGTTACTATTACATGGCCCCCATTCATAAGCTAAAAACTCTATGGATACTTTCTCAACCAAAAGCCTACAAATGTACACTTCCACAAATGGAGCTAACAGTGGCAGTGTGGCACGTATGGTGAAACTGCTCCACATAAATTAGCAGGTGAACAACAGATTTAACGGACTTCAAATATCAAGCCACATTCACCTCCACATCACTCCCGTATACCTGATAAGCATCTCAAAACATCACATTTCTGCATGTGTCAGTCTGTCCGTGACGCCAAGGGGGCCTGCTGTTCCTTGGTTTGCAAAGGTAAACTAAACTCTTGCTAATGGTGTTCTTCATCATTTGTATGATTTGGCACCTCCCCTTGACTGTCCAGTGGCATGTACTGTGCCATGATTGCTCTGATCTCAGAGTCCATGTATGACCTTAGTCTGTATTTGTAGACAACATAACTTCCTGCTGCCACAACTACCAAGACTATCAAGATTCCCCAAACTGCAGCCCAAGCTGCTTTACCCTGAACAGCTGTCTTACTTATGCAAGTATCATGCTCTTTGATGTACAGTAGGTCCCCACTGCAAGTACATTCATAGTCACCCCATGTATCTCTGCAACTGCATTCTGGACATTGACAAGCTTTTTTCTCTTTGCACTCATTGATGTCTTCACATTTTTTAACACCATCCCCTCGGAAACCAGCTGGACACTGGCATTTTCCATTTCCTGATTCCTGACAAGCAGAAAATGTTTTGCCATTGCGAGTCTCATGCCAACAGCCGCCATGATTTATCAAGCACTTTCCTGGTCCAGCAGGTTCACAATTGCTGTAGCCATCGCCTTTAAACTGCACACCATTGAATGTAGGGCATTCACACACTCTACCACGGAAAGTGTCCCTGCAAGCTGTTACATTAGCAGCTTTGTCTTGCCAGCAACCCCCGTTGTCATTCAGGCACTCATTAGTTTCCATTTCATCACTAAGACAAACATTTGGCTCGGTAGTTTCTTCAAAGCCAGCACATATAGCTTTGAGGACAGCTTTCCTTTCAAGCTTTCCTCGGTATTGCCGATTGTTCACAACAAGAGTAGGCAATATAGTAACATCTCCTCTTGATCCTTTCCCAATCTGTGCATCCTGCTCCATTTTAAGCAAGGGGTGGTCCGAATCAGCATTTGGATCTCCCATGCACTTGTCAACCTTCTTTACATCTAAACCTAGTGATTTGATGACAGTTTCTGCACATTTCTTGTTATACTTTTTGTCCTTCATTGGGCACCTTATGTGAAAATCAGTTACATAATCCCACCAGATCCATGGTTTTTTGCTCTCTTTTGCAACTTGAAATACACAAAGCTGTCTCAGGTTCTCAACAACAACATCTTTTCCTTCATAACCAGTGCTGAAATCCTGCTCTGGATCAGGCGCACAGTACCTTCCATGGTTTATACACTGAGACTTGCATTGCTTGCTAACAACAAATGCTTGAGGACAGTACCAGGTGATATAATGGGGCGTGAACTGACTATAACCACCTTTCTCGAGTAGTTGAGCAGCTCCTTTAAATTCCTTAAGGAAATTCATCAGCATATCACATTTAGGCCCACATTCGTCATTGCTGTTTGTCCACAACTCATACTCCACCCGATCATCTGGATGTGGAACAGCCTCCCTCCAGTCCAGATTCACATTTACCATTTCACCATCTTTAATAGCTTTTTTCAACTGTTCCCCGAATTTTTTATCAATCAGAGCAGAAGGAATGGTTATATTCTGTATATACTTTGCAGCCTCATCATCTTCCCGTGGCAAGTCCATAGTAATCAGTGGCTCATCCTTGTCATCAACCACAAGGACCGCTGAGGCACCAGCATTTTGCGCATTCCAAACCTTCTTAGCAAATAGGCAATTTCCGCGGTCGATGAGGAGGAAGTTGGGGAGCGCGCCGGGCTTGGCGCGGAAGTGGCGGTCCCCGTCGTAGGCTTCGCAGGCGTCGGCGTTGTCCTTGGGGTACACGACGGTGCCGGCCATGCTCCCGCCGTACTGCGGGACGCCGAAGTTGCCGATGGCGCTGTCGTGCCTCCCCCGCAGCGACGTCGGCGACGTCACCATCAGGCTGTTCTTCTCCACCACGAACCGCGCCTCCACCACCATCACCGCCGCCGCGGCGAGCGCCACCGCCACCACCAGCGGCAGCGGCAGCCCCGCCGGCCCCCGCATCGCGCCCACCGCGGCGCAGCGCTCGCTCCCCTTCGCTCGCTGGCTGCTCCGGCGGCGGCGCGAGGGTTTAGATCGGAGGCGAAGCGAAGCAGCAGCAGTGGAGAAAGATGGGAGCGGTTTATTTTCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0066400.1 | 10 | 10412188 | A | G |
| Osa10LNT0066400.1 | 10 | 10412192 | A | G |
| Osa10LNT0066400.1 | 10 | 10413502 | T | C |
| Osa10LNT0066400.1 | 10 | 10414207 | T | C |
| Osa10LNT0066400.1 | 10 | 10414715 | A | G |
| Osa10LNT0066400.1 | 10 | 10415030 | G | T |
| Osa10LNT0066400.1 | 10 | 10417357 | A | C |
| Osa10LNT0066400.1 | 10 | 10417533 | T | C |
| Osa10LNT0066400.1 | 10 | 10417578 | G | A |
| Osa10LNT0066400.1 | 10 | 10417971 | A | G |
| Osa10LNT0066400.1 | 10 | 10418012 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0066400.1 | osa-miR319a-5p | Cleavage | 5.0 | 19.647 | 1 | 21 |
| Osa10LNT0066400.1 | osa-miR168a-5p | Translation | 4.5 | 17.487 | 1 | 21 |
| Osa10LNT0066400.1 | osa-miR1428a-3p | Cleavage | 4.5 | 22.647 | 1 | 21 |
| Osa10LNT0066400.1 | osa-miR1879 | Cleavage | 3.0 | 11.819 | 1 | 24 |
| Osa10LNT0066400.1 | osa-miR1879 | Cleavage | 5.0 | 9.924 | 1 | 24 |
| Osa10LNT0066400.1 | osa-miR1879 | Cleavage | 5.0 | 15.925 | 1 | 24 |
| Osa10LNT0066400.1 | osa-miR396f-3p | Cleavage | 5.0 | 7.482 | 1 | 24 |
| Osa10LNT0066400.1 | osa-miR5510 | Cleavage | 4.5 | 15.794 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0066400.1 | 10 | qSPB2-1 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0066400.1 | 10 | qSPBp10-2 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0066400.1 | 10 | nan | Resistance or Tolerance | Other stress resistance | R1933 | R1629 |
| Osa10LNT0066400.1 | 10 | nan | Resistance or Tolerance | Other stress resistance | R1933 | R1629 |
| Osa10LNT0066400.1 | 10 | trdw10.1 | Resistance or Tolerance | Drought tolerance | RG257 | R1261 |
| Osa10LNT0066400.1 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Osa10LNT0066400.1 | 10 | nan | Physiological trait | Sterility | R2309 | RG257 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)