© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0004800.1
GGAAATAGTTCAATGTAAACGACGCTGGGGTAAATAATCTACAAGTCATATAAGGATTAAGAGTGCATGTTTTCGTCCAAAATGCATGCCTCAGATGGTTTGTTTCCACATGATCATAGCGGTAGCAGGTATAGATAGCAAGGAAGTCCGAGCCCCCAGGTCTGACAAACGACTAACACCAGACATACATTATCAAGTGCGCTACATCTGCACAGCAGAAGATCCACAGTCTTATCCTATGTTAGTTAAGTTCTGGGACACACTTTTGCTTCAGGGGGAGCACGCACGATAGTATAGTTTGGTAAGAGAACAGCTTCATCTACTCTGTTCGTCACCATCATGATGCTGTTTGCATCTTGCAGTTAGCACTTACCAGTTGGAGACACCAACAGCCTTGGACCCAGGATCTTCATGGTTGCGATTGCTTGGAGGACTCCTACTTCTATCACGAAAGCCAGCATTGTTTGTTCTGCTCTGATCGCTGCCTCGAGAAGAGCTATAGAACCTGGCATGAAAGCTGAGACCATCACCAGGTTGATCGTTGTTGCTGCTGGCATGAAAGCTTGGATTGTCACTGGTTTGATTGTTGCTGCTGCTGTTATGAAAGCTGGTTTGGAAGCCAGAAGTATCGCCAAACTGATTGCCACTGTTGCTGTTATGGAAGCTACTATGAAAGCTAGAACCATTCCCAGACTGACTGCCATAACCACTGTTATAGTTGTCAGTCGACCTTGAAGTATAGCCTGAATCATATCCTCGACCACCATAAGAGTCATCTGAAGATGCCCAGCGCCGTGACCTTCCACCATACCCTCCACGGGAGACCATATCTCTCAACTGTTGCGAAACAGACTGGTTTGCACCCTCCAAAATCTTCACGAGATCTGAAGCATACTTTGAATCCTGATCACAGAAGAATGTATAGGCAACTCCAGTCGCTCCAGCCCGTCCTGTTCTCCCAATTCTATGGACGTAATCCTCAACACCTGTTGGGAAATCGTAGTTGACCACAACTCTGATATCCTTTATGTCCAAGCCTCGGGCAGCCACATCAGTAGCAACAAGAATAGGGCATCTGCCACTTCGAAATTCACTCAACACAGAATCCCTCTCGGCTTGTGATTTATCACCATGAATAGCAGAAGCACCATACTGCCGTGCTAGGTTTCGAGCCAGCTGATCACACATCCTCTTTGTGGAGCAAAATATTATGATTTTCGATCCAGGTTCCTGTGACCTTAGGATTTGATCAAGCCGCCTCGATTTCTCCGGAGGTGTGATAACATCCACATACTGAGTGATTGACTTATTGGCAACCAGTTGATCAGTGTTCCCAATGTTAACTTGGACTGGATTGGACAGCAAATCTGAGGCTATTTTCCTCACCTCTTTTGGCCAAGTGGCAGTGAACATAAGAGTCTGTCGTTTGGGTTGTACTTGTTTCACAATTTTTCTTATTTGTGGCTCAAAACCCATATCAAGCATGCGGTCAGCCTCATCAAGAACAAGATAAGATACTTGATGTAGGCTCACTCTTCGCATTTCTAAAATGTCATTCAATCTTCCAGGAGTTGCAACCACAATGTCTGCACCACGCTCTAGATCTCTTAGCTGAGGACCTTTAGGAGCACCTCCATATAAACAAACAGACGATATTCTTGACGATCTCCCAAACTTTTTCGCTTCATCTTGGATTTGTGTTGCCAATTCCCTTGTTGGAGAAAGCACTAATACCGTTGGACCATCCCTTGAATTATGTTGAAGGCGCTTAAGAAGGATAAACCCTGGAATGAGATAACCCAGTGTTTTTCCGGAACCTGTCTTCGCCACAGCTACAATATCACGATTCCTAAGAGCAATTGGCCATGATTGAGCTTGGATAGGAGTTGGTGCAGAGAATCCCGCTTGCTGTACCTCCCTTAGAATCTCTGGAGGGAAACCTGTGGACTGAAATGTCATGAATGGAGCTGGAGCCTCATTTCCGACAATAGTGATCTCGTGCTTAGCACGATACGCTTCTGGTGAGGTGCGGTCTCCACTGGCAGCCTCTGAAAATACATTCTGTGCAGGGTATACTCCAGCTGCAGAGCACGGCTGCGAAGAAGGGTTGCTCCTAGTATTTTGCTCAGTGAAAGGCACGTTCTGCGCATGACTTCCCGCCGCTTCCGTGCGCCGCTCGAAATGATCATTCAAATGATCATTCCTTGCCCTATCATCAGCAGGAGCAGCATTCTGCGTTCGGCTCGCTCCAGCCTGCGCCTGCGACTCAGCAGGATCGCTGTTCCTAGGCCTCTCCGGAGGCTGCTGCGCCGGGGGGGAGGAGGGCGGCGGCGCCGTGGGGCGGTCGTACTGCACGGCCTTGGTCTCCGGGTTCCAGAAGTAGAGGTACCCGGTGTTGCCGTCGATGAGCCCCCTCCACGGCTTGGGCAGCGTCGGATCTGGCGGCGCGTACCGCGGCCCCCTCGCCGTCGCCGCCGCCGCCGCCGCCGACGCCATCTCCCAACCCAACCCCTAGCGAATGCGGATTGCGGCGGGGGGAGCGGGGAGGGGACGCGAGGAGATGGAGTGAATGAATGGAGCCTTCGCTTTGTTTTGCTCTCTCCTCTTTTTCTTTTTTTGGCGTCGCGTGGTTAAGTAGGGCGCGATGGGGAAAAAATGGAAAGGAGAGGAGAGGAGGCGGAGGGGTCGATGAGAAGAGAAGAATGTGATT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0004800.1 | 1 | 3713809 | C | T |
| Osa01LNT0004800.1 | 1 | 3713898 | A | G |
| Osa01LNT0004800.1 | 1 | 3713910 | A | G |
| Osa01LNT0004800.1 | 1 | 3714092 | T | C |
| Osa01LNT0004800.1 | 1 | 3714351 | A | C |
| Osa01LNT0004800.1 | 1 | 3714457 | G | A |
| Osa01LNT0004800.1 | 1 | 3714661 | G | A |
| Osa01LNT0004800.1 | 1 | 3715213 | A | G |
| Osa01LNT0004800.1 | 1 | 3716239 | G | A |
| Osa01LNT0004800.1 | 1 | 3717450 | A | G |
| Osa01LNT0004800.1 | 1 | 3718326 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0004800.1 | osa-miR5807 | Cleavage | 4.5 | 14.715 | 1 | 24 |
| Osa01LNT0004800.1 | osa-miR395c | Translation | 4.5 | 21.956 | 1 | 21 |
| Osa01LNT0004800.1 | osa-miR395a | Translation | 4.5 | 21.956 | 1 | 21 |
| Osa01LNT0004800.1 | osa-miR396c-3p | Translation | 4.5 | 19.792 | 1 | 21 |
| Osa01LNT0004800.1 | osa-miR395w | Cleavage | 5.0 | 19.444 | 1 | 22 |
| Osa01LNT0004800.1 | osa-miR1858a | Cleavage | 4.5 | 19.347 | 1 | 21 |
| Osa01LNT0004800.1 | osa-miR1858b | Cleavage | 4.5 | 19.347 | 1 | 21 |
| Osa01LNT0004800.1 | osa-miR2870 | Cleavage | 3.5 | 16.027 | 1 | 21 |
| Osa01LNT0004800.1 | osa-miR395x | Translation | 4.5 | 21.956 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0004800.1 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0004800.1 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0004800.1 | 1 | nan | Morphological trait | Root | RM7383 | RM243 |
| Osa01LNT0004800.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0004800.1 | 1 | gp1a | Morphological trait | Panicle/flower | RM1 | R753 |
| Osa01LNT0004800.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)