© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0066600.1
GAGCGACAGCGACGGCTTCTATATTCTAGGGTTAGAGTTTCGATCTTTGCAATTTTTTTTTTGCGATTTTCCTTTTTGCAGTCGGATGTCTTCAGTGTCCAGAAGAGAAAATTTGGTTGCTCTATCCGTATGCAAAAATCCGATTTTCGAAGACACCTGAGTGTAGACGAACCACCCACTCAACTGTGAAAATTGGTTTTGACCGCAAAAATAAATCTTTTCTATAGTATAGTGTGCCCTAAACCTAAAGCTAGCATTTGTTATGTGACTTTGGTAAGCTTGATCAGTGCTTATGGAGCCCTAGGCCGTTTGCCTTAAGGCCAACATTTGAGAATCTCACCAAATTTGTTAATTACATCGCGATGTTAATTAGCGTTTTTGCAATTTTGCTACTCCTTTGTTTCCAGTGGATATTGCCGCCTTTCCCCAACGTCGTCCAATGTCATTATAGTAAAGGTTAATGTTTGCAGTGTCATTATTGCAAATCTCCCAACGTCGACGCGGCGCGACAGGAGCGGCCACGCATGCCGCGTATCGCCGCCGGCGAGCGCCAACCGAGACGTACGTGCGGCACGGCCAGCCACCGTGCCGGCGGCAGTCGATCGATCAATGTGGCGGCCGGGCCGGCGCGCTGAAGCAGGCAGATGGTTTTAAATGGGCCTAGTGGCTACGTTGTGGGCCGGGCCGAAATCGGCAGCTACGGAGATTGTGGAATTTGTGCATATGCTCTGTTTTGTACCGTACCGTCTTCCTAACCAGGTTCGTACGTCGTCGTAAGGCACTCTTCGCGCCCACTAGGCACCACACGGCAAGGGTGGTAAGCGAACATCCTTTGATTTGAATCTGGTCTGGCAAATCAATCAGCTATCAATGCAAGGGCACATGACACATCTGCATGGCTTTTTTTTTTTTTGAAAAACAAAATAATACTGCATACTTATCATCAGCTACTTTTTTTAGATAATCAAATATAATATCCCGGCCTTTGCTCAAGAAGAGCTACAGCCAATTATTACAAAGTAGCACTCGAGATAAGAGTGTAGTTCAAATAAAATATAACACACTTAAATAGAAAAAGCCAAAATAAGGAGAACATATTTATTCCAGCCTATTTGTGAATCTCCATCCATAGTTGGCATAAAGTTGCATAACCATTGTCTCCAACTTGCGACATGCAACTTTCAGAAACTCTCCATCTTCATCACGCCTTTGTAATTGTGCCCAAAACCGGAGCCAATGAGTTGCCCTGAAAATTACCACTTATCAAGTATCATTTCTCTTCTCTTCTCTTCCTCCTCATCCGATCCACTTGCCTTCTCTCGAAACAAAACAACGTGGATGCAGATAGCCGAGGTAGGAGGGGATAGAAAAGAAAACGGAAAAATAGGAGTGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0066600.1 | 10 | 10767029 | C | T |
| Osa10LNT0066600.1 | 10 | 10769341 | T | C |
| Osa10LNT0066600.1 | 10 | 10773617 | T | C |
| Osa10LNT0066600.1 | 10 | 10766683 | A | T |
| Osa10LNT0066600.1 | 10 | 10766728 | T | C |
| Osa10LNT0066600.1 | 10 | 10767048 | T | C |
| Osa10LNT0066600.1 | 10 | 10767072 | T | C |
| Osa10LNT0066600.1 | 10 | 10767096 | T | C |
| Osa10LNT0066600.1 | 10 | 10767115 | T | C |
| Osa10LNT0066600.1 | 10 | 10767240 | A | G |
| Osa10LNT0066600.1 | 10 | 10767617 | T | C |
| Osa10LNT0066600.1 | 10 | 10767685 | G | T |
| Osa10LNT0066600.1 | 10 | 10767836 | A | C |
| Osa10LNT0066600.1 | 10 | 10767905 | G | A |
| Osa10LNT0066600.1 | 10 | 10767913 | A | G |
| Osa10LNT0066600.1 | 10 | 10767966 | T | C |
| Osa10LNT0066600.1 | 10 | 10768112 | A | G |
| Osa10LNT0066600.1 | 10 | 10768159 | T | C |
| Osa10LNT0066600.1 | 10 | 10768475 | C | T |
| Osa10LNT0066600.1 | 10 | 10768862 | A | T |
| Osa10LNT0066600.1 | 10 | 10768934 | T | C |
| Osa10LNT0066600.1 | 10 | 10769348 | A | G |
| Osa10LNT0066600.1 | 10 | 10769457 | A | G |
| Osa10LNT0066600.1 | 10 | 10769460 | A | G |
| Osa10LNT0066600.1 | 10 | 10769826 | T | C |
| Osa10LNT0066600.1 | 10 | 10769841 | G | A |
| Osa10LNT0066600.1 | 10 | 10770021 | T | C |
| Osa10LNT0066600.1 | 10 | 10770072 | T | C |
| Osa10LNT0066600.1 | 10 | 10770369 | T | C |
| Osa10LNT0066600.1 | 10 | 10770395 | T | C |
| Osa10LNT0066600.1 | 10 | 10770531 | T | C |
| Osa10LNT0066600.1 | 10 | 10770897 | A | G |
| Osa10LNT0066600.1 | 10 | 10771273 | A | G |
| Osa10LNT0066600.1 | 10 | 10771464 | T | C |
| Osa10LNT0066600.1 | 10 | 10771590 | A | G |
| Osa10LNT0066600.1 | 10 | 10771765 | A | G |
| Osa10LNT0066600.1 | 10 | 10771965 | C | T |
| Osa10LNT0066600.1 | 10 | 10772008 | A | G |
| Osa10LNT0066600.1 | 10 | 10772180 | C | G |
| Osa10LNT0066600.1 | 10 | 10772956 | C | T |
| Osa10LNT0066600.1 | 10 | 10773169 | G | A |
| Osa10LNT0066600.1 | 10 | 10773393 | A | G |
| Osa10LNT0066600.1 | 10 | 10773461 | A | G |
| Osa10LNT0066600.1 | 10 | 10773535 | A | G |
| Osa10LNT0066600.1 | 10 | 10773539 | T | C |
| Osa10LNT0066600.1 | 10 | 10773589 | C | A |
| Osa10LNT0066600.1 | 10 | 10773679 | C | T |
| Osa10LNT0066600.1 | 10 | 10773684 | G | T |
| Osa10LNT0066600.1 | 10 | 10773868 | G | A |
| Osa10LNT0066600.1 | 10 | 10774022 | G | C |
| Osa10LNT0066600.1 | 10 | 10774180 | C | T |
| Osa10LNT0066600.1 | 10 | 10774215 | T | C |
| Osa10LNT0066600.1 | 10 | 10774485 | T | A |
| Osa10LNT0066600.1 | 10 | 10775397 | A | T |
| Osa10LNT0066600.1 | 10 | 10775463 | T | C |
| Osa10LNT0066600.1 | 10 | 10775486 | G | T |
| Osa10LNT0066600.1 | 10 | 10775553 | A | G |
| Osa10LNT0066600.1 | 10 | 10775604 | A | G |
| Osa10LNT0066600.1 | 10 | 10775607 | C | T |
| Osa10LNT0066600.1 | 10 | 10771889 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0066600.1 | osa-miR166k-3p | Translation | 5.0 | 24.034 | 1 | 21 |
| Osa10LNT0066600.1 | osa-miR166l-3p | Translation | 5.0 | 24.034 | 1 | 21 |
| Osa10LNT0066600.1 | osa-miR2090 | Cleavage | 2.5 | 19.183 | 1 | 22 |
| Osa10LNT0066600.1 | osa-miR2931 | Cleavage | 4.0 | 13.93 | 1 | 20 |
| Osa10LNT0066600.1 | osa-miR2922 | Translation | 5.0 | 16.006 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0066600.1 | 10 | nan | Physiological trait | Sterility | R2309 | RG257 |
| Osa10LNT0066600.1 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Osa10LNT0066600.1 | 10 | qSPB2-1 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0066600.1 | 10 | qSPBp10-2 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0066600.1 | 10 | nan | Resistance or Tolerance | Other stress resistance | R1933 | R1629 |
| Osa10LNT0066600.1 | 10 | nan | Resistance or Tolerance | Other stress resistance | R1933 | R1629 |
| Osa10LNT0066600.1 | 10 | trdw10.1 | Resistance or Tolerance | Drought tolerance | RG257 | R1261 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)