© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0067000.1
TTTGGAAGCATAATATATATACTTTTTTTGGAACATTGCCGTAATCTAATAATCAATTACATTTCTACAAGAGAACATATGTACAACTTACACCCCACATAACCAGACCTCAGAAAAGATGGATATGAACATTCCTATTTACATTCTTCAAGCCACCAGACAAATCCTCCAACTCTCACTATTTTCTTGCCATTTCATATGTACACTCAAGAATACAGAATAAACAGGAGCATTAGCCTTCTCATAATCTATATTAGCTGTACAACAAGAACGCCATTGATGTCATCTTGTCAGCCACTACACTGGAACAGCATGAAGGAGGCTATGTCAGTTCAATGTATGTCCCTCATTGATTTCCACTGGGTAAAAATGGTCAAAGTTTCCCCTTAAGCACATGGCTGAAGGCGTGATGTTGAAATAGATTTCATCCAATTGTCAAATGAAACATAAATAGCAGTCCAATCAAACTTCTGTTCTCGATTTACTGCATAGCTCTTCTGCTTTGCAATATTGTTATCTCCAAATGGGTTTTTAGCAGATGCTGCATCAGAGAACCCTGAATCACTGTGGCCACTAGCAAACTAAATCTCCTAGGTCAATGGATCTGTTGCATCAGCCTCTAGGAAATGAGCAACTGCAGAGTAAAGTTGCTGTTCTTCAAATGGCTTTGCCACATATCCATCCATTCCACATTCCATACATCCCTCAAAAGTTGCTTGAATTACATCCGCTGTCATGGCTAATATAGGTACATGCCAATGGGCCTTATTTCCATAGATCTCGGAAGACACTTCACCTGCCTGGATCGTATCATTGATTTTACTTTCTACAGAACGAACTAATCTAGTAGCTTCAAACCCATCCATCTCAGGCATCTGAACATCCATAAAACAAGCATCAAATTTATGAGGTGGCTGGAGCCTAGAAATTGCCTCCTTTCCACTGTCCACACAGGTAACTATAGCTCCATATTTCTTCAAAGCACCAGCTGCAACTATGCGATTAACAGCATTGTCGTCCACAACTAAAATGTTTTTTCCTGTTAGTACACTTCGAAGAACCAAAGAATTATCTCTACTTCGTCGGCCTGTAAGTCCAACCCCTAGTGCTTTACTAAGACAAGCAGCAACAGTACTAAGACGAAGGGGTTTTCTTATGCTATTAGAATACCCCGCCAACCTCAAACAATCAGAGTCAGCAGGAGTTATTGAACCTGCCAAAAGAAAGAACTTTGGCATGGTTTGCCAAGACTTGAGTGTGCCCTTCAGCCGAAGATCTATAAGACACCGGAAAAATGCCAAGCCTGAGTCCTCGCCCCAAGCTTCTTTGTCAACAAGCACCATATTTAGACTGCTTTTTACACTTGAATTGCAGGATTCCAATAGAGCAGAAAGTGCTGATTCAGATGTGGCTGCAAGATCACATTGTATTCCAAGTCTCCGCAGATGGTACATGGTAACCTCAGCACGAGCACATCTTCCGTCAACAACAAGCGCTCTCATTCCTTGAAAATCTGGTGGAGTAGGTTCAGGACAATACCTTTTGATATCCCCTGGATCTTTCCTATTTTCCTTGAAAATAGCAGTAAAAGAAAATGTACTACTAACTCCTGGTTTACTCACAAACCCTATTTCTCCACCCATCAATTCAACCAGGCGTTTCGTAATACTCAAACCAATTCCAGTTCCACCATATGTCCTTGAGGTGGAACCATCCGCTTGCATGAAAGGTGTAAAAATGCGAGTTTGAGCATCCTTAGTTATTCCTATGCCAGTGTCTTCGACAGTTACTAGTAAGTTCACTGAATCTATTGCATCTGACGAATCTTTGAACATCCTGAAACTCTCCAAGGTTTTCCGATTATTTGCTACTTCAAGCCCACTTAGAGTATTATATGGCATCGTATTTTTGGAATTCGCTGTAACTTCTATGTTTTCAGGAGAAGTGTCATCCAGAGCTTCCATTTTTCTCTTCACTTCCTCAATTAAATGCACTCGAATGAAGATATGACCTTGTTCAGTAAACTTCATAGAATTCCCTACAAGATTTGTAATGATTTGCCGAAACCGCCACGGGTCCCCGATCAGAACATCTGGAACTTGATCAGATACAAGTACAGCCAACTCTATGCCCTTAGCCCATGATTTTTCAGAAAACAAAGATACCACATTGTCAAGAATATCACGGACATCAAATCGCACCGCCTCCAGCTCAATTTTGCCTGATTCTATCTTAGCGAGATCAAGTACTTCATTTATTAAGTTTATCAATGACTTTCCACTTTCTTGAGCTGTAACTACAAAATCCCGCTGAGTTGTATCAAGTTCCGTATCCATGAGCATCTGTAGCATACCTAGTACACCATTCATTGGAGTTCTAATCTCATGTGAAACAGTTGCTAGAAACTGGGACTTAGCAACATCTGCAGCTTCAGCTCGTCCTTTTAAATCTCTCATTGTCGTATAATTATCTTCTGCCTCTTCAAGAGAATTCAGAGTAGCATAGATAATATAGCCAACAAGCAAAACAATTATAGCTACTGCTGAAGATATCATAATTGCAGACCATGGCAGTGAAGGTGCATGCTTGAATCTGCAATGCATTACGTGTTTGCGTGTCGGGTCCCCGAAATCAATATTACTAATATGCAGATCATCAGATGCAATAACATCCGAATCATACATTTTAGTAGGATAAGTATGATTTGTGATGTCATACAGCCTAACAACTATCTTTTGTTTGCTAGCAAGTTGCTCCAGGAGTCTCTCCACCAGAGACGGAACATCAAATGAGGCACCAAGATAACCCAGCGTAGCTTCAATACGCTCCTCTGGAGTTGCATCTGGAGGAAGATCATACTTATACACAGTGAACGTTAGCACCACACCAAGGTGATTAGATTTAAGAAGTGGGAAAGGGGCTGTTAGGGCCCCTTTGCCTGTTGCCCGTGAGCGCAATATATTATCACGATCTTCCTTCCCAGACATCATGTCAACTGATATAATGTGCTTTACAGTTTCCTGGGAGAAAATAACAGGTGCATACTCATCTTGAACTGGTGAAGGCTGAAGCTTTTCAGGATTGTAGTCATGAACAAGGGATTGATCTTCGGTCTCCATTTTCTTAATCTTCCATCCAAGCTTTTGCTCAAACAACTCCCTTTCGCTGTGCAGCACCTTCAAAGCATAGGCAACACCACTCATCAATGGCCTTTCAAATGTTGTCCTAGCCGTGAAATCCTCAAATGTTTTCTGATCAATAGCAGAAGGATTCTTCCCATGGTGAAAAGTTGAGACTAAAATAGCCAATGCATGCACATGGTTCATGCTTACATTGAACTGATCTTGTAGCATCCTAGCTCTCTCATCACACATATTTTCAAGATTCTCAATTCTTCTAGCAACAACATCAGCATGCATGCTTGAAAATATCCAGACAGAACTACAAAGCCCAACTAAGACACCAAGAAGCAGGGCTCTCTTTGACCATTTTCGACTTATCTTAACACTCGGTGTCTGGAGGAGTTTCTCATGCTGACACAGTTCATTTGCTTGCTTCCCTCTTTTGAAAATAGTTATAACTACCAAAATTACAACTATTCCAAGGGAAGCAGACAAACTAAATATCATCCCGTGATTGAAGCTCAAGGCGTTATTATTCCACAATGTCGTAGGAGAGCCAATGTCTTGTTGCATGGCATTTTGCAATAAATTGTTTTCATGATTATTTTTGTCATAATTATCTTCATTTGCGCAACAATCTTGAATAATCACATTGTCCAGCCTGTTTTGATTTCCTCCAGATGGTTTATTCTTAAGACGACAATTTGACATATCAGGCATGCTGTGGGCTGGATTATCATCATTGATCGTACCAGATTTACATATGCATTCCCGCTCCGGCGAAGACAGGAGCGACGCCAGCGCCTGCAGCTTGCTCATGCTGAGGTTGAACTGCGCCGCCACCTCCTCCACCCTGTCCCTCACACCCTCCCCACCACCACCACCACACCCCCTCCCACACCCACCCATCGCCCACACCAGCAGCAAGCACCCCAGGAACCCGGCCACCGCCCCGGCACCGGCGTGCGCCGCCTTCCCTCGCCGTGCCCCGCAGCCGCCGCCGCCGCCGCACTCTCCGACCCTGCTCATCTCACTGCCGCCGCCGCCGCCCCAAAGCCTCCAAGAAACGCGCCACACTAGCAGAGAAGAAATCCGGGGCGAGCTAGCTCTGACGGGGGCCAAGAACGCCGCCGCTCCAGGGTTTCTTGTCGTTGGTGGACATGGCCGGAATCGCGAGGACGAGCTCGAGCAACCACGCGGGCTTCCACTTGTCCCCGTTGCGTCCACCGCCTCCGCCTCCGCAGCCGCCGACCCTGCCGCGGGAGGCCATCAAGAACGACCACCCTCTGCCTTTCCCGGTCGGCAAGGCGAGCAGGGGAGGTCACGGTCGTCTCAGAGACGCCACCGCGCCATGAAAGCGACCTCCACCCACAGCAATCCCCGCAACGCCGCCAAGAACCAATCCAATCCAAGAAAGCCAACCCTCAACACCTCAAGAATGTCGAACCAAGAGCACAAGGCGAGGATGTCTTGGATTCTTGCTGGAATTGGGGAAGGAGTGGGTGGTAGAGGTGGTGGGGAAAGGCAGAGAAAGGGAGAGAGAAGAGAGAGAGAAGCAGCAACAACAACAACAGGTGAGGTGAGGAACAACAACTGGTAAATTGGAAAGAAACAAGAGAGAGGAGGAGGAGGTGGTGGTGGTGATTACTGCCTAAAGCTGCTCTGCATCATCTGCTGCTGGCTGCTGCTGCTCCTGCTACAGTGTGCTACTCTTTCTCTTTCCTGCTGCTTTCATAGTGGTGGTGGTGCTTGTGCTTCTCACTCTCTCTCTACCCTTCTCCATCTGCTACTACTACTAGTACTGTCTTTTGGTTCTAGAGAGAGGATTTCTCTAACATATGCTGCTGCTGTTGCTGTTGTTTAGACGGAGGAATCAGATGGGGATGAGGTATTGAGATGGAGAGGGGAATTCTTGGTTTTTTTTTCTCTTTGATGTGGAGAAAGTGTTTTCTTCAAGGTGCATATCATTATCTCATCATCCTGTGGGTCCTAATGGAGCCCTCTCCCTAGCTTGATTGACATAGCTTGTTTAGAGATTTTTTTTTCTTTCATTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0067000.1 | 10 | 11193331 | A | C |
| Osa10LNT0067000.1 | 10 | 11192059 | T | C |
| Osa10LNT0067000.1 | 10 | 11195731 | C | T |
| Osa10LNT0067000.1 | 10 | 11195773 | C | A |
| Osa10LNT0067000.1 | 10 | 11196094 | A | G |
| Osa10LNT0067000.1 | 10 | 11202686 | A | G |
| Osa10LNT0067000.1 | 10 | 11192192 | G | C |
| Osa10LNT0067000.1 | 10 | 11192422 | T | C |
| Osa10LNT0067000.1 | 10 | 11192709 | G | A |
| Osa10LNT0067000.1 | 10 | 11193064 | T | C |
| Osa10LNT0067000.1 | 10 | 11193108 | G | T |
| Osa10LNT0067000.1 | 10 | 11193919 | A | G |
| Osa10LNT0067000.1 | 10 | 11193954 | C | G |
| Osa10LNT0067000.1 | 10 | 11194773 | C | T |
| Osa10LNT0067000.1 | 10 | 11194927 | T | C |
| Osa10LNT0067000.1 | 10 | 11195931 | G | A |
| Osa10LNT0067000.1 | 10 | 11195939 | G | A |
| Osa10LNT0067000.1 | 10 | 11197252 | G | A |
| Osa10LNT0067000.1 | 10 | 11197762 | T | C |
| Osa10LNT0067000.1 | 10 | 11197798 | G | A |
| Osa10LNT0067000.1 | 10 | 11197865 | G | A |
| Osa10LNT0067000.1 | 10 | 11198092 | T | C |
| Osa10LNT0067000.1 | 10 | 11199053 | C | T |
| Osa10LNT0067000.1 | 10 | 11199325 | T | C |
| Osa10LNT0067000.1 | 10 | 11199727 | T | A |
| Osa10LNT0067000.1 | 10 | 11199953 | A | G |
| Osa10LNT0067000.1 | 10 | 11199963 | G | A |
| Osa10LNT0067000.1 | 10 | 11199976 | C | T |
| Osa10LNT0067000.1 | 10 | 11199979 | C | T |
| Osa10LNT0067000.1 | 10 | 11200492 | A | G |
| Osa10LNT0067000.1 | 10 | 11200532 | G | A |
| Osa10LNT0067000.1 | 10 | 11201538 | G | A |
| Osa10LNT0067000.1 | 10 | 11202472 | C | A |
| Osa10LNT0067000.1 | 10 | 11202775 | A | C |
| Osa10LNT0067000.1 | 10 | 11202827 | A | C |
| Osa10LNT0067000.1 | 10 | 11203010 | T | C |
| Osa10LNT0067000.1 | 10 | 11203375 | A | G |
| Osa10LNT0067000.1 | 10 | 11203674 | A | G |
| Osa10LNT0067000.1 | 10 | 11203929 | G | A |
| Osa10LNT0067000.1 | 10 | 11196376 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0067000.1 | osa-miR5526 | Cleavage | 4.0 | 14.332 | 1 | 21 |
| Osa10LNT0067000.1 | osa-miR5805 | Translation | 4.5 | 23.884 | 1 | 24 |
| Osa10LNT0067000.1 | osa-miR5512b | Translation | 4.5 | 15.226 | 1 | 21 |
| Osa10LNT0067000.1 | osa-miR6253 | Cleavage | 5.0 | 8.71 | 1 | 22 |
| Osa10LNT0067000.1 | osa-miR6254 | Translation | 5.0 | 18.881 | 1 | 21 |
| Osa10LNT0067000.1 | osa-miR6256 | Translation | 5.0 | 19.207 | 1 | 22 |
| Osa10LNT0067000.1 | osa-miR395c | Cleavage | 5.0 | 13.251 | 1 | 21 |
| Osa10LNT0067000.1 | osa-miR396e-3p | Cleavage | 5.0 | 11.988 | 1 | 24 |
| Osa10LNT0067000.1 | osa-miR395o | Cleavage | 4.5 | 13.251 | 1 | 21 |
| Osa10LNT0067000.1 | osa-miR1428a-3p | Cleavage | 5.0 | 23.175 | 1 | 21 |
| Osa10LNT0067000.1 | osa-miR1850.1 | Cleavage | 4.5 | 14.792 | 1 | 21 |
| Osa10LNT0067000.1 | osa-miR1861c | Cleavage | 4.5 | 18.557 | 1 | 22 |
| Osa10LNT0067000.1 | osa-miR1881 | Cleavage | 5.0 | 17.005 | 1 | 24 |
| Osa10LNT0067000.1 | osa-miR1882e-3p | Translation | 4.5 | 10.553 | 1 | 24 |
| Osa10LNT0067000.1 | osa-miR1320-5p | Cleavage | 4.5 | 22.298 | 1 | 21 |
| Osa10LNT0067000.1 | osa-miR2093-5p | Translation | 5.0 | 10.427 | 1 | 20 |
| Osa10LNT0067000.1 | osa-miR396f-3p | Cleavage | 5.0 | 20.596 | 1 | 24 |
| Osa10LNT0067000.1 | osa-miR3981-5p | Cleavage | 5.0 | 14.903 | 1 | 21 |
| Osa10LNT0067000.1 | osa-miR3981-3p | Translation | 4.5 | 11.461 | 1 | 21 |
| Osa10LNT0067000.1 | osa-miR5150-3p | Cleavage | 5.0 | 19.351 | 1 | 24 |
| Osa10LNT0067000.1 | osa-miR5155 | Translation | 5.0 | 19.442 | 1 | 24 |
| Osa10LNT0067000.1 | osa-miR5492 | Translation | 4.5 | 12.725 | 1 | 21 |
| Osa10LNT0067000.1 | osa-miR5492 | Translation | 5.0 | 7.858 | 1 | 21 |
| Osa10LNT0067000.1 | osa-miR5501 | Translation | 3.5 | 5.053 | 1 | 21 |
| Osa10LNT0067000.1 | osa-miR5512a | Translation | 4.5 | 15.226 | 1 | 21 |
| Osa10LNT0067000.1 | osa-miR2275d | Translation | 3.5 | 7.549 | 1 | 22 |
| Osa10LNT0067000.1 | osa-miR2275d | Cleavage | 5.0 | 10.071 | 1 | 22 |
| Osa10LNT0067000.1 | osa-miR5537 | Cleavage | 4.0 | 7.617 | 1 | 22 |
| Osa10LNT0067000.1 | osa-miR395f | Cleavage | 4.5 | 13.251 | 1 | 21 |
| Osa10LNT0067000.1 | osa-miR395u | Cleavage | 4.0 | 13.251 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0067000.1 | 10 | qSPB2-1 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0067000.1 | 10 | qSPBp10-2 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0067000.1 | 10 | nan | Resistance or Tolerance | Other stress resistance | R1933 | R1629 |
| Osa10LNT0067000.1 | 10 | nan | Resistance or Tolerance | Other stress resistance | R1933 | R1629 |
| Osa10LNT0067000.1 | 10 | trdw10.1 | Resistance or Tolerance | Drought tolerance | RG257 | R1261 |
| Osa10LNT0067000.1 | 10 | nan | Physiological trait | Sterility | R2309 | RG257 |
| Osa10LNT0067000.1 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)