© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0067900.1
AGATCAGCGAAGCATCTAACTTAATTAGACTCTTAAAAACAAACAACAGACGCAAACTGAAATTTTGAAATACATCTACTTCTGCAGCATCTTGTTTTATGTTTCTTTCATTTCTGGAGAAGTTGTAACAAGTGATGATGACATCCTGTGTTTCAGGTGCGCCACTCTGCCCTCTTCAGCATCTACTCTAGGTATAATTTGATGAGGTTCTGGATCGAGTATCAATGAATAAGGCATTTCTTCTTTCAAAAAAAAAAAGGCATTTTTGGGCGATGAATGCTTCTCTCGGCAGGATGAATAGGCTTCTCCCACATGAGTAGATGCAGCTGGAAGGAGCACAATGGGTATCGGCTCAAGGAAAGCTTTTGGCTGATCGAGAGAGTGTCAAAGCAGCGGATTGCCCCTGAACTAGAGATCATCCAGGGCAGGACCTTCTCATTGGACACCCTTGAGATGACCAGCAATTTCGATGCCTCTCTTGCCCGGTTGAACAGATTGTGCATCCCTGACCGTGTTGACGGTGTCTCGCTGTCATTGTCATCTTGCAACACTGAAGATATGTAGATAAAACCCTCCTCAGTACGGCTGATTGCAAATCCTAGTTTTGTGTCACCTACTTTAGGAGTGATCTCCAGTGGCATTTCTCCTCCTATGGAGCTGTACCAAAGTCGGGCTGCCTTCACCACCTCAGTGTTATAGCCTTGGTAATCCTCCAAGGTTGCATTTGACAGATCAGGCAACAACCCTGAATTGACAGTTGCAGATGTGGCGTCTCCAACTCTCGATATCTTGGTGAGAAGATCATCACTCTGCACACTCATCAACTTGATGGGGACACCAGAGGCCTGCGAGGCATAGAGCCATGTGTTGGCACGAGCCAAGGTGACCTCGAAGGACTCGTATAGATGTGACTTCATGTCCAACGCCATGGGTAGGACAAGCATTGAGAGGTAGCAGCTAGAATCAGGCATGTGCACCGAGTCTTGCATATTCCCCTTCATGGCATATGAGATGTATGCATCTTCTGCCTTTCTTGGTGCTGTTGCAAGTCTTGTGCCTCCATGGATTGATAAGGCACCTAGAAACTTCAGATGCCACGGATACATTGATGATACAGACCTGATATCAGATTGTTTGTACTTATCTGGGTCTTTTGGTGCATACTCATCATGTTCTAAAATCCCATGTTCTTGCTCCCGTGGCAGAGGCACAATACTTCCAACTTGTTTGTTCGCATCACTTGACTCTTTATCTTGAGTTTGATGATATTCATCGAAGTTGGCGCTCATGATAGCATTTTGTTCTTCCTCAGACCCATGATCTTTCTCTTTTGTCACTCTATCACCATAAAAAATCTTATCCACCAACTGTACGTTGATTCTAGGATTGCTTGGGTGATTGCTAACAGCAGATGTCAATGCAGACTCTGCGTCGACACTTGCACCATGAATTTTTACTGAGATTTCTTTGAGGCCTAACAAGTGTCCAATCCTGATAGGTGCAGTACCATATAGATCCCCAAGGGCACTGAAACCTAACTTGAGCTTCCTGAGATTAGGCATTGCCCCTGCCTCAAATTTCAGCCAAGGTACACTACAATTATACTTGAAGTACTTGAGAACTGAGAATCCTACCTTATCAAAGAAAATGTTTTCTACAGATGCTCTGTGCACATTCAAAGATAGAGCCATGAGGGCAGGCAATCCCCTGAGAATATCAACACTGTTCTTTACAAGCTCCCTTACTGCAATCTTTAAAATGCATAGGTTGCCAAGTTCTCCAATCCACTTAGGAACTCTGTAAAAGATGCAGCTGTGCAGCAACCACTCAAATCTCTGGAGAAGAGGTGGAGGTGCCAAATTATCCCACAAAATAGTTACTTCTGAGGCTCCTGAAGCCGCAATTTTCTTTTGAGAGGAAGAAGAAACTAGAGTTAGATTTTTCAGATTACCAAGTCTTCCAAGCAAAGAGCCCAAAATTTCCATGTTTCTCTCTAGATGTTTGGAAGGCAGTGCACAGAAGGTGAGATGAATATCCCGTACGTTGTTCAGATTGCTAATGATGCCCCCACTGGGTGATGAGTTACTACTGCTTGATCCTAGTTCGCTGGGAGGTGTCATGTGGCCCATCAAATCAATCAGATTCATATCAAAACGAAGATGGAGGTGTAACAAGCACGGGAGAAAGATAATATCCCAAGGAACAGCAGTGAGTGTTGTATCCATCTGCAACGTTTCTAAATATTTTAGCCCTCGCATTTGGCTTGGTAGTTCTGTGCGAATATCGCATGCAATCTTCAAATATCTCAGTTGAAATAGTTCAGAAATCCCACTGAGGTCTAAGAGTTCATCACCAACATGACCAGATAATTGAAGGTTTAGAACACGAAGAAGCTTAAACTCTGTAAGAGAAGGCATACACTTACATAATCCAAAAAATGTAAGTGATCGAACTTCTGATGTTCTGATGTTTGTTGGTATTTTTGCATACTTTATGTCACCAAAGTGGACAGAAAGTCGACGAACTTTATCAGAAAGTTCCACATCCTTCCGGTAAAAATCTAATACCAGAACAAAGTTCTCCTCTACAGACTTGTATGCAATAAGATCTCGTACCTCATCATGAATTGTACAAGTTGACACCTCATTGTTGTAGTTGAGTCTGCTAGGTTGGAGGAATCTTCTGTCAATAAGTTCATCGAAATAGCTCCCTGCAACTTTCTCCAAGTCTCGGCCCTCTATTTGATCAATAAAACCTTCAGCCACCCATTTTTCCACAACATCATCCTTGCATATTTTATAACCCTCTGGATACATATTAAGATATAGCAAGCATGTCTTCAAGTAATGAGGAAGATTATTGTAGCTGAGGTTTAATACTTGCCGCGTTCCTTCTATAGAAGAATTTGTCCTCTGGAAAAGCTTGATTGATAAGATCCCATACGGAGGCAGCCCATAAGTCATCAATAATAATTAAATACCTTCTATCTTGAAGATACTCCCTGATGCTGTCAATAAGCGCAAGCTCCTTATAATCGTCAGGTGGCTGCTTCCGCTGGAGTTGAAAGAACATCTCGCGGAAAACCCTCTTCATATCAGGCTTCCGGGAGATCCGGACGAAAGCTCGACAGTCAAATTGTCCCCCAATTCTGTTGTACAACAGTTTGGCAAGTGTGGTCTTACCAATACCTGAAGATCCAACAACAGACACCACCTTGAGCTTCTGATCCTCATCATTGGCGAGCCGCTCGATGAACTCGCTCACCCGGCCATCAATCACTAGCTGGGCATCTTCTTCCCCATACGGCCTAGATGGCAACATAGGGCCAAATGACACATATCTCCGCCTGTGGTCGCAGCAATCCAGACCATACCTCCCATGCCGCTCAATGGCCTCCTCAACATAAATCCTGAACTGCGACACCATCTTCCCCATCTGCTGGTGCCTCTTGAGCCTCTTGGGAAGACGAGCAACCTTGACACGGCCGATTCTGCAGACGAATCTGGCCATGGTGTTCGCGCGGCGGCCAGGCCGCGGCGCTGCGCAGAACTCGTCGATGTAGTCCTCGATGTCGTAGGACAGCTCGCGCACCTCTCTCATCCAGCGCTTGGCCGTCGGGGGAGGGTCCTCCAGCTCCGACAGATCGGCGAGGTACGCGGCGACCACTCCAAGGTCGCCTCCCAGGAGGAGCATCCGATCCTTCACCCCCTTGGGTAGCCTGCTGCCATCGGGAGCCACAAGCAGCTCCTCCATCTTCCCAAGAAGGGATCCCATGGCTCCCTGTGAAGCACAAATCGGGGCGGCGAGGGGCGGGGCCTCCATCCCGAGCTGCTTGTATCAAGCAATATAGAGAAAAGCAAATTGGATGAGATTCATCCTGGACGGTATCGAGAAAATCGCAGCCCAATGAAGATACGAACCCAGCTATCGGAACTTGGAAGTTGGAAGAGCACTGGTGAAGGCCGCAGAGACCAAAGACGGATCGGCGCAAGACACAGCAAGAGCTTTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0067900.1 | 10 | 11652482 | A | G |
| Osa10LNT0067900.1 | 10 | 11655002 | G | A |
| Osa10LNT0067900.1 | 10 | 11655953 | C | T |
| Osa10LNT0067900.1 | 10 | 11656384 | A | G |
| Osa10LNT0067900.1 | 10 | 11656395 | T | C |
| Osa10LNT0067900.1 | 10 | 11656810 | C | T |
| Osa10LNT0067900.1 | 10 | 11657240 | A | T |
| Osa10LNT0067900.1 | 10 | 11657380 | T | C |
| Osa10LNT0067900.1 | 10 | 11658290 | A | G |
| Osa10LNT0067900.1 | 10 | 11658393 | A | C |
| Osa10LNT0067900.1 | 10 | 11658623 | T | C |
| Osa10LNT0067900.1 | 10 | 11658687 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0067900.1 | osa-miR6255 | Cleavage | 5.0 | 10.645 | 1 | 22 |
| Osa10LNT0067900.1 | osa-miR156a | Cleavage | 3.0 | 9.689 | 1 | 20 |
| Osa10LNT0067900.1 | osa-miR156b-5p | Cleavage | 3.0 | 9.689 | 1 | 20 |
| Osa10LNT0067900.1 | osa-miR156c-5p | Cleavage | 3.0 | 9.689 | 1 | 20 |
| Osa10LNT0067900.1 | osa-miR156d | Cleavage | 3.0 | 9.689 | 1 | 20 |
| Osa10LNT0067900.1 | osa-miR156e | Cleavage | 3.0 | 9.689 | 1 | 20 |
| Osa10LNT0067900.1 | osa-miR156f-5p | Cleavage | 3.0 | 9.689 | 1 | 20 |
| Osa10LNT0067900.1 | osa-miR156g-5p | Cleavage | 3.0 | 9.689 | 1 | 20 |
| Osa10LNT0067900.1 | osa-miR156h-5p | Cleavage | 3.0 | 9.689 | 1 | 20 |
| Osa10LNT0067900.1 | osa-miR156i | Cleavage | 3.0 | 9.689 | 1 | 20 |
| Osa10LNT0067900.1 | osa-miR156j-5p | Cleavage | 3.0 | 9.689 | 1 | 20 |
| Osa10LNT0067900.1 | osa-miR166a-5p | Cleavage | 5.0 | 20.051 | 1 | 21 |
| Osa10LNT0067900.1 | osa-miR166d-5p | Cleavage | 5.0 | 20.051 | 1 | 21 |
| Osa10LNT0067900.1 | osa-miR166e-5p | Cleavage | 5.0 | 20.051 | 1 | 21 |
| Osa10LNT0067900.1 | osa-miR394 | Cleavage | 4.5 | 19.152 | 1 | 20 |
| Osa10LNT0067900.1 | osa-miR156k | Cleavage | 2.0 | 9.689 | 1 | 21 |
| Osa10LNT0067900.1 | osa-miR156l-5p | Cleavage | 4.0 | 9.689 | 1 | 21 |
| Osa10LNT0067900.1 | osa-miR1439 | Translation | 3.5 | 17.309 | 1 | 21 |
| Osa10LNT0067900.1 | osa-miR827 | Translation | 4.5 | 20.974 | 1 | 21 |
| Osa10LNT0067900.1 | osa-miR2090 | Cleavage | 5.0 | 13.888 | 1 | 22 |
| Osa10LNT0067900.1 | osa-miR3979-3p | Cleavage | 4.5 | 20.275 | 1 | 20 |
| Osa10LNT0067900.1 | osa-miR5083 | Cleavage | 4.5 | 17.286 | 1 | 20 |
| Osa10LNT0067900.1 | osa-miR5150-5p | Translation | 5.0 | 22.035 | 1 | 24 |
| Osa10LNT0067900.1 | osa-miR5522 | Translation | 4.5 | 19.17 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0067900.1 | 10 | nan | Physiological trait | Sterility | R2309 | RG257 |
| Osa10LNT0067900.1 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Osa10LNT0067900.1 | 10 | qSPB2-1 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0067900.1 | 10 | qSPBp10-2 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0067900.1 | 10 | nan | Resistance or Tolerance | Other stress resistance | R1933 | R1629 |
| Osa10LNT0067900.1 | 10 | nan | Resistance or Tolerance | Other stress resistance | R1933 | R1629 |
| Osa10LNT0067900.1 | 10 | trdw10.1 | Resistance or Tolerance | Drought tolerance | RG257 | R1261 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)