© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0068000.1
TAACCAAATCAAGAAATATTATTCAATAACATTTCAGTTTACAATTTCACTGTTTTACACGCAAAGTTTAGACCTGAGCTAAAAAAAGCTTCCTGACACTATCAAGGTATATTCTACCGAATCCGTCATGTCCCCAGGAAGTCCCATATGAATTTAGATAGATCAGATAACATTCACCGTCCCGAATCCCAAAACCAACAACAACGACACAATGAGAACAGGGATTACCTTTTTTATTCAATTCATATTGGGGATCTTCTTCTGGAATTTTGTAGATTTGATGAGGTAGCAACCTGAAGTAACCAGTTGTTACCCGGAAACTAGCAATGAGCACCTTTCCATCCATTATATGGCTCTCAATAACTTTCTTTATCTTCGTCAGAAATATGTGCTCCTTCATTCTCATCTTTTTTCTGAACCTCCTTTTTTTCTTCTTTCCTATACACTTCTTGTCAACAATGCTTACTTCTTCCTTATCACGTTCCCTCATCGCAATCTCAAGATTGAGCTCTTCGTATTGTTTGATTTTGTATCTTTCTGTGGACTGCACAAACTGAGCCTGAGGGTTCATATATGATTCTTCCGAAATAACGCCTTCATTTTTCATCTTATCTAAACAAACATTCAACCTTTTCGAACCCTTGACTTTATGCCTGGTATAAAAATCTTCTACTATATCTTCCAACTGAGCTCTTGACAGATTAACCAGAAATTCATCAGGCTGTCCAATCTTATCTTTTAAGATAGTAGGGTATGATGCATATTCTCTTTTATACAAGGACTCAACTGATGATAGTGTCGCGTAATATGAACACGTCCCAGAAGTTTGTTGCCTCACTGGAGGGAGAATTAATCTGTTATGAAACTTCCTTGTTCTCCAACTAAAACAGAGATCAGTGCTGTGCTCTTTCAAACTCTCAAAAGCATATGCATCGGCATTGAAGCTCCCCTCTATAAACTGGTTTGAGACAATGGGCACAACTTCAGATAGACCATACATTTGAGTCATTTTGTCAACTTTAGCACGGATGTCACCAAGGAAATTGATTATCTGTGTAGACTTCTCCATAATAGTTTGTTGATATCTAGCAAAGCGAACAAGGCATCTCACTTTGCCATTAAAGATACTTCCAAACTCTCTCATTTCAGAATTAATTCCATCGATAAGTTTCAAATGTCTGGTGGAATTATTCATGAACAGTTCAACAATTTGAAGTGTCTTGATCATTTCATATACTGCACAACTGGTTACTTCACCTGGAGCAAACTCAGCTATATCGACCTTCAGCTGCAAAACTTCATCTTCTAATTTTCCTATTTCTGAGGAGGTATCCATGATTTTTCTGAATGAAGCCTGCAAATTTGAGCCTAACTGTGACACCCAGACTTCTTCATCTTGTACTCTTAAATTTAACTTCTGAAGCATCTGGTGCAAACTGGATGATAAATCCATCGCAGACGTGTTCTCCTTATCGAGTTTCTTGACTTGTGAATCCAGACGAACATAGGCAATTGAACTAAACCGTGGTTCCTCAATCATCAACTCCAAATAATTATTAAGACACCTCAAAGCACAGTTATTATGTTCAGCAGTTTCAACTGATTGTCGAATAGATGGTCCATATTTGTTGTTGAAGTCTGTCAGATGTTGAATCTGAGCCTTTTCCAATTTGCCTTCCATCTTCCAAATTCGTTTTTTACCTTTGTTTATTTTTTGTCTCACAGTGGCCAAATCAAGTAATACTGACTCAAGCAATTTTGCCAACTTATCAATAACTCTGAACATTGATTCACGAAACCATTTCCTAGACACACTGTGACGTAGACACCAAATATGAGGAATCTTTTGTCGGTAGAGCCTTGTGCTTGACCTGGTTATCTTGGTGGAACATTTCTTGCTTTTTCGTTCATCCAATTCTCTGATGAAGATACTTTTTTTGTCTGAAGACACAGCCATATTTTGCCTTTGTATTTCTGCAAGATATTGAGAGTAGGATCCCAGAAAATTATGATGAACACCTAAATTCAAGGAGATATGTTCATCTTCAACAATCTTTCTGTCTTTCTGAAGGAACATTCTACATAGAGACTTGTAGGCCTGTGGTAAATTCAGTTCATCATTCTGTTCTATCAAATATTCGTACATCATCAACCCACTTCTTGTACCGCATGGTGTTTGGCCTTCATGAAACTCTAAACAGAGTTTCACGCCCAAGATAGATGTGCCTGTCTGTATTCTGCAAGCATCAACGCACTTCCAATATCCATTCTTTGCCTTTCTGAAAACATTGTTCTCGTCATCATAGCATAGCTGGTTATCAGGCCAATTCAAGAACCAAAGGGTTCCAGGGGAGTCCCGTGGATCAATCATAGTAAGGTCAACCCCCACCAGTATGTTCTGTGGAAGAGGATCCCATGTTTTTCTCTCAGCCAAGAACATGATGATTTCAGTATCAGACCAAGAGTCCCCCATAGCAATGCCAAGTGGTGGTAGTACCCGGAGAGGCATAATCTGCGAAGAAGCCGAGGCTCGATGTCGACGACGAAACTGACGAACACCCTGGGGTCGCCGTCGGAGCAGAGGAAGGAGGTGCAGTAGGGTAACCAAGCACAGAAATCCACGTACTCTACGGCGGCGGTGATCCTTCGCCCTAGGGAGGCCAGAAATGGAGGAGCGGCGCGGTGCCGGCGGCGGTGCCCGGATGCAGAGGATCGAGTGGATTGGGAAGGTCGCGGGTCGCCGGTGGCCTCCGGCGAGGGGAGCCCGGCCTCGCCGGCGCCGACGATGACTTCCCGCGGCCTCCTCGCCGCGCCTTGGCGGAGAAGGGAGAGGAGGGGACACAAACT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0068000.1 | 10 | 11808911 | C | T |
| Osa10LNT0068000.1 | 10 | 11815249 | T | C |
| Osa10LNT0068000.1 | 10 | 11808285 | G | T |
| Osa10LNT0068000.1 | 10 | 11808440 | A | G |
| Osa10LNT0068000.1 | 10 | 11809495 | C | T |
| Osa10LNT0068000.1 | 10 | 11810037 | A | G |
| Osa10LNT0068000.1 | 10 | 11810361 | A | C |
| Osa10LNT0068000.1 | 10 | 11811701 | A | G |
| Osa10LNT0068000.1 | 10 | 11812123 | A | G |
| Osa10LNT0068000.1 | 10 | 11812664 | T | A |
| Osa10LNT0068000.1 | 10 | 11812810 | C | G |
| Osa10LNT0068000.1 | 10 | 11809445 | A | G |
| Osa10LNT0068000.1 | 10 | 11813081 | G | C |
| Osa10LNT0068000.1 | 10 | 11813112 | G | A |
| Osa10LNT0068000.1 | 10 | 11813947 | A | G |
| Osa10LNT0068000.1 | 10 | 11814044 | T | C |
| Osa10LNT0068000.1 | 10 | 11814948 | G | A |
| Osa10LNT0068000.1 | 10 | 11815812 | A | G |
| Osa10LNT0068000.1 | 10 | 11815859 | C | T |
| Osa10LNT0068000.1 | 10 | 11816590 | A | T |
| Osa10LNT0068000.1 | 10 | 11817161 | A | G |
| Osa10LNT0068000.1 | 10 | 11817802 | G | T |
| Osa10LNT0068000.1 | 10 | 11807318 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0068000.1 | osa-miR166a-5p | Cleavage | 4.5 | 12.448 | 1 | 21 |
| Osa10LNT0068000.1 | osa-miR166c-5p | Cleavage | 5.0 | 12.448 | 1 | 20 |
| Osa10LNT0068000.1 | osa-miR166e-5p | Cleavage | 4.5 | 12.448 | 1 | 21 |
| Osa10LNT0068000.1 | osa-miR159d | Cleavage | 4.0 | 15.573 | 1 | 21 |
| Osa10LNT0068000.1 | osa-miR159e | Cleavage | 4.0 | 15.573 | 1 | 21 |
| Osa10LNT0068000.1 | osa-miR1850.1 | Cleavage | 4.5 | 13.925 | 1 | 21 |
| Osa10LNT0068000.1 | osa-miR1854-5p | Translation | 4.0 | 5.778 | 1 | 21 |
| Osa10LNT0068000.1 | osa-miR2923 | Translation | 3.5 | 8.223 | 1 | 22 |
| Osa10LNT0068000.1 | osa-miR5523 | Cleavage | 3.5 | 13.701 | 1 | 22 |
| Osa10LNT0068000.1 | osa-miR812o-5p | Cleavage | 4.5 | 15.585 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0068000.1 | 10 | nan | Physiological trait | Sterility | R2309 | RG257 |
| Osa10LNT0068000.1 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Osa10LNT0068000.1 | 10 | qSPB2-1 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0068000.1 | 10 | qSPBp10-2 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0068000.1 | 10 | nan | Resistance or Tolerance | Other stress resistance | R1933 | R1629 |
| Osa10LNT0068000.1 | 10 | nan | Resistance or Tolerance | Other stress resistance | R1933 | R1629 |
| Osa10LNT0068000.1 | 10 | trdw10.1 | Resistance or Tolerance | Drought tolerance | RG257 | R1261 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)