© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0068200.1
GCCAGTCAAAACACACATAAACATATATATAGACAAACATTTGACAGTTACATTACAGAAGAAATCTATCTGAAGAAACATACAAACAGCATGGCACTCGAAATTTTAAAAAGACAATATTTTTCACCGACACTCTGACTATAGCATCTTTCAGAGATGACAGCAGCATCACACACAAGACCCTTAATCGTCCTTGTACTAATGTGATTGGTTGATCAGGCAAGATGCAAAGTAGCCTTGATCTTCTCGAGTAACTGCATCAGCTTCAATCAGCAGACTTGACACCTGAAAGATACACCCGAGATTGTATGACACTAGTCCCAATCAAGAACCCAGGCATCACCATTAGGCCAACTTTAGGCCTCTCTGCACCTTCATCTAGGATGATGTTCTTGACAACACTTTCCATGTGAATTTCGGAGAAGTCACTCCCCTTCTTCACTTGAAAGACCTTGACTTTTGGATCAAAGGAGTATGCCAGCCTGTGCAGTAACCATATCGACTTCGCTAACTTCAGAAATGCTTGATAGAAAGGTGTCCTCGGATGGCCACCGCTCATTACATAGTTTCTCTGATCCATGTTACCAAAGAAAGAGCCTTCCATTTTTGGGTGCACAAGTAATAGGTACTTGCTTCTGCAAAACTTCCCAAAAACCGAATCAGGATTTTGGCTCAAGACATCCAAAGGATCCATGGCTCGTACTGCAAGGAACTGATGGAAGAAAGCCTCATTGGAAACAGTAATGTTAGCAGCCTTAACAGAAAAGCTCTCTTCTTGGAAACCACCAAACATTCTTTGGCAAATATATGACTCGAAAGCATACTTTTTGTGAGCCCTCCTTGTGTAAACCACAGCAGGTTCAATTGCATTAGCAGCAGCATCAAGATCCCACCCTGCAGCTTTCATCATGTTGATCAAAGGCTTTGAAAAATCATGTATAGATTGGTATGCATTATCAACAGCAGATGTAAATAAACTTGGTGTCAACTCGATGGAAAAGTAGTTGTCTTCATCATCAGATTCCTCAGATTCCTTGTTGAGTAAGCCCCTTTGTTTCAGTTTCTTCTCAAGCTTTGATTTCCGAAGTTTAGCCTCATCGATTTGCTGCTGTAAATGTGTTATCTCAGTATCTCTAGTCTGGATTTGGGACTGGAACTTCTTTACCATGACCTCATATGTCTTCAGCAAGTTCTGTTGCTCTTGTATTTCAGAAAGCAGCCGTGCATCTTGAGGTGTTGCCGCTACAGGCTTAGGATTCTTTTCTCTGTAAGCATGCTTGAGCTCTGAGAGCTTCGTGAGCTCCTCTATGACAAGCTGATCTGCAGCCTGGATCTTGTCTGGGTCATATGGGGTGTGAGCTTCCTGCAGCTGAATGTATGCAGACTTTAAAGAGGATATATTGTTGAATATCCTTCCAATCATGGTGTCCATTGAGCCCATGTTCTGATTCATGTTTTCGTCAATTGGTTGAGGATGAACCTTCTGGTTGTTGCTATCATAATTTTGAGACTCCTTAGAGCCTGGCAGTACCATTACTTCTTCCCCACAGGATCAGCTAAATTAGTTGTTTTTAACCGACCAACCGATTGGCATCCACCTTTCGATTCGAACCAGATGGGGGAGCAGGTCGGCCGCGTCGCGCCCCCCTCCGAAACCAGCTCGCCTTCGTCGCCGTCGCAGTCGTCGTCGGCCGTGCGCGCGGGGTAACCGCAGGCCCAGGCCACGCGGGAAGGAAGGGAGGAGGAGGAGGAGGCCACTCTCTCGGCGGTGGCGGCGGCGCGCGCGGGGAAGGACGCTCCGAGCTCGCGCGCCCGCAGATCGGGGGGGAAGACGGAGGCGAGTACGGCGTGTGGAGTGGAGAGGGAGGAGAGGGGAAAGAGGAGGAGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0068200.1 | 10 | 12114799 | A | G |
| Osa10LNT0068200.1 | 10 | 12115425 | A | G |
| Osa10LNT0068200.1 | 10 | 12116120 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0068200.1 | osa-miR5534b | Cleavage | 5.0 | 17.893 | 1 | 21 |
| Osa10LNT0068200.1 | osa-miR172a | Cleavage | 3.5 | 17.107 | 1 | 21 |
| Osa10LNT0068200.1 | osa-miR172b | Cleavage | 2.5 | 17.107 | 1 | 21 |
| Osa10LNT0068200.1 | osa-miR172c | Cleavage | 3.5 | 17.107 | 1 | 21 |
| Osa10LNT0068200.1 | osa-miR172d-5p | Translation | 3.5 | 20.218 | 1 | 20 |
| Osa10LNT0068200.1 | osa-miR172d-3p | Cleavage | 3.5 | 17.107 | 1 | 21 |
| Osa10LNT0068200.1 | osa-miR418 | Translation | 5.0 | 9.321 | 1 | 21 |
| Osa10LNT0068200.1 | osa-miR1429-3p | Cleavage | 4.5 | 11.768 | 1 | 21 |
| Osa10LNT0068200.1 | osa-miR5161 | Cleavage | 4.5 | 14.216 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0068200.1 | 10 | qSPB2-1 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0068200.1 | 10 | qSPBp10-2 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0068200.1 | 10 | nan | Resistance or Tolerance | Other stress resistance | R1933 | R1629 |
| Osa10LNT0068200.1 | 10 | nan | Resistance or Tolerance | Other stress resistance | R1933 | R1629 |
| Osa10LNT0068200.1 | 10 | ssd10 | Morphological trait | Panicle/flower | RG257 | RZ583 |
| Osa10LNT0068200.1 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)