>Osa10LNT0068600.1

CTATTGTACCCCAAAGGCCTTCTGGATTTCAGCTATGACTCGGTCTGCGACATCGGGACCAAACATCCTCGGCAAATTTGAAGTCAGGTCAACCTCGATTGACTTGGACCTTACAATTTGGTCCCTCTTTATCATGTTTTCTCTCTCGCCTTCTTCCATCTCTGAAGTATGATCAGCACAACTATCAAGCCAAATTTGAAGAAGTGCCCTAGCAGCTGTTGCTAGTTGACCACGCACTATCTCTTCCAAGGTACCCTCTCCTCCTTGCCCACAGTCGATGCTCATCAGTATTGCTGTCAGTGAGAAGGCGCTGCGCACGAAGAGGGATCGCGATCAGTATGGACGGGCCTGCGGCAATTCTTCGACCTTCTCACGCTGTTTGTCCACCTGAGTATTTTCATAGTATCTCTCTATGTATTCGGGATGGAGCGCAAGGTCTTTCCGTGGGAGAAGGTCCAGAAGCACCACGATCGAAGTTGGGCTACCTTGTATAAATTCCATGAGGAAATGTGGAGCATCTGTCGAGGCGTTCAGAAAGATGAGAAGAGATGTAATGTCGATTGCGCCATTTGGGACTTTGCAGTGTAGTGAGGACTGGAGCATGAAATCAATCGTCGATCCCGGCGCGCCGCGGCGCACGTCGAGCGAGCCCACGGCGTTCCCGGCGCCGCCGCCGCCGCTGCGGAACTTGGCGACGTCGGGCGGCACGGCGGAGGGGAGCAGCCGCGCGCCCAGCCGCGCC

Explanation	CPC Score
noncoding	-1.14303

Transcript ID	Chromosome	Locus	Ref	Alt
Osa10LNT0068600.1	10	12879437	T	C
Osa10LNT0068600.1	10	12880049	T	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa10LNT0068600.1	osa-miR5797	Cleavage	4.0	17.803	1	21
Osa10LNT0068600.1	osa-miR397a	Translation	5.0	23.181	1	21
Osa10LNT0068600.1	osa-miR5160	Cleavage	5.0	14.645	1	22
Osa10LNT0068600.1	osa-miR5160	Cleavage	4.5	22.626	1	22

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa10LNT0068600.1	10	ssd10	Morphological trait	Panicle/flower	RG257	RZ583
Osa10LNT0068600.1	10	nan	Physiological trait	Sterility	C701	C16
Osa10LNT0068600.1	10	qSPB2-1	Morphological trait	Panicle/flower	C1633	RM239
Osa10LNT0068600.1	10	qSPBp10-2	Morphological trait	Panicle/flower	C1633	RM239
Osa10LNT0068600.1	10	nan	Resistance or Tolerance	Other stress resistance	R1933	R1629
Osa10LNT0068600.1	10	nan	Resistance or Tolerance	Other stress resistance	R1933	R1629

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus