© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0069700.1
ACTATTTAATCAAGCATTGCATTTTTTAGTTCAGATCCAACCAAGATGATTATTAACGCATATGTAAACCGGAATACAGATCTGATCGCTCCATAGGAGCGGAATACAGGAGGTAAGAAAAGGAAACAGAAACAATTACAAGTTCGAACACCCACCAGGATTCAGCTAGATGGTACTACTTATTACCGCACGAGAATCAACTGAGAAGCGGCTCGCGTCACCCCCTGGCTCCTAATATACGTTGCCATTAAATATAATGGTGATGCTGCCGCCACTAGTATGTACAAGAGTGCCATGAAGGGCTTCTTTTTTGTTGTTGTTTCTGAATCTAAGCTAGAATCACCCGCGTCCATGGAAGGGGCCGCACGGATGCAAACTATTGCCTCAATAACTCTCCTCGAAATAATCGCAGCCTCAAATTATGTGATAAGGCTGCTTTGGATGCGCTTGAGGCTTGGACAAACCACACGCAGTCTGCTAAAGTCCAGCACATTTATCTTTGGACAAGAGTGCACATTGAGAATCTCCAATGCACTGCAGCGCGATATTGCAGATTCTAGTTCCTCATCTTGCAACATGGTGCATGCCAGAAGTTGGAGATTTGTCAGTCTTGGGCAATCAAGCTTCAGAACCTCCAGGGAGCTACAATTGCTCAGGTTCAAAGTATAAAGATTGGAGCATGTCAAATCCACTTCCTTTAAATTTGTGGACAGATTAAGATTGATTTTAGACAGGCGTAGATAGGTTGTCATTGAAGGGATGATGACTTTCTTAATATTTGGACAACCAGTACAATTCAGAACTTCAAGCAGACGATCAGACCTTTCACTGATCTCTTCACTCCTCACTGGTGCTGAATCAGGTGGACAAACATCAACAGGCATGTCACCAGAACTGCAGTCATCTGACCCACACACCAACTGATGCAGGTTTGTGCATCCATTCAGATTCACATTAACCAAATTTGTACAACATGAAAGAAGCTCCTCGATTGCAGTCTGCCCAATGGATGAGTAGGACAGATCTAGCTCAACCAACATAGGAAGAGCACCCTCTCTGTATAGGGCATCTAATGATGAATCACTGAGATACTTGCAAGCCGAAAGTTTTAAGATCTTTAACTGTGGGCAACTGTCAAAAACAGGCTTCAAGTTGGTCAAAAATGTGTATGACAGGTCAAGCAAGGCCAGCTTATGAAGGCAATGCAAAGAGGACAATCCATTGAGGTCAATTGATACACATGATGACAGGATAAGATTTTCAATTAGCGGGCACGCCTCTGCTGTTTGAGACAGTGAATCATCCATTAGTTTCCTGCAGAATGAGGCATCTAAGGATGTCAAGCGAGGGCAATTTATTGATGCCTGGGAAAGAACACCACAACCCTTCAGCTCCAATAGAGACATCTTTGGGGCCTCAATGTGAAGATCACTTAATTTTGGACATATTCCAAGGTTTAGGGATTCAAGACCAACTGGACAAAATGACGCCCTTTCGAGGTGATCACAGCCATCAAGATTCACATTTTGCAGATTTGGGCATGAAAGTTTTAGTAATGTCATGGAGCGGCAACCAGCAAGAGAGAGATTGACCATGGAACTACTATTCAGTTCAACAGTGCTCAGACTCTCACAGTTGTCAAGAATCAATGATCTGAGCAATGGGCAACCACCTCCATCACTGAAAACTTCGCAAACTGCATTTGTTAATGATTCGCAGTCACTAAGATCGACATCGATCAAGTTGTTGCATAACAATGACAAACTTGATAGGCTCTCTTGCTTTTGCAACACCAATTTCTGAAGAGCATTTGATGTTATGCTAACACGATGAAGTACTGAGCATCTGGAAACTTTAATGTAAGAAAGAACAGGACTTCGCAAAGTCAACTCAGCAAACTTGCGCAGGTGAACAAGACTTATGTTCTTGAGATGTGGCAGATCCAAAGACACAGATGTCAACAAACTGCAGTTATCAAGTTGTAATGCCTCAAGCAGACGACTGTAAGCTATTGCAGCCATGGAAGCAGACGTGATCCCCTCACAACTTAGTAGTCTCAGGTCTACCAACATAGGAAGCCTTACCGACTCAAATGAAATGTTTGGGCAGTTAGATGCATCAAGAACAGAGAGATTCGGACATGAATTAGCTATCTCACGCAGTGTCTCATCAGTAACACATGAGCAAGATGACATATCTAGTGATGCTAACAGCGGACAAGCTGTAGCAGCTTGGCGAATGGCATTATCAGAAAGTTTATGGCAGGACTGAAAATCCAATTCAACCAACTGGGGACAGTTGAGTGATACATGAGCCATGCCAGTTCGCCTCAATGAGAGTATTTGAAGCTGGGAACATCTGACAGATATTCTGAGTGCACGACACTTCAAAATTTGAAGTTCACGTAATCCATCGTGATTAACAGTTACTTCTTGAATGCCACTCCCGAGGGATGCATCACTAACTGTCAGAGTAGTCAGTAATGGGCACTCAGACAACAACTGAAAAAATGCTTCTCCCAGCTGCCCTTTGCCCATTATTAGTGTCTTGAGATGCCTTAAGCATGTTATCGCTTCCATCACCAGTAATTCTGCATGTGGGACACCAGACAGATTTAGGTATGTCACATTTTGGTAACGATGGCAAATGTCAACAAAGTTTTGCAGAGATATCCTAGTATTCTCAAACTTCAAGCATTTCCAGAAGTCCTCATGCATACTTGCAGAGCGCCACTGTTTACAGGAGGCACCTGCTTTGCATAGATCCCTCTGACCCAAGAAAGAGAATATCAGGTGCAATAGATCATCAGATAGATCCATTCTTATTTCAACATCTTCAGAATTTTCTCCACCTGAGATTTCTACATCACCAACATTGCCATCCCCTGGGTTCTCATTAACACCATCATTTGGGAAAAGCGACAAACCAAAATCTAATTCATTTTCTGGACAGTGTGAGAGCTTGAAATGGCCATGTTCATCAGAACCAGGGAAATGTGTTGATTCCAAGCCAAAGAAGGAAGCATTTACACCAGAATGTTGTGGGCTTTCTTCGCCGAAGCCGCGCACTTTGGGCCGTTTACTCTGCAGATCCCTGTCTCCATCCTCATCTCCCTCCTCGTCCTCCTCGTCTCCCTCCTCCGCGCCCTCTATAGCGCCCCCTGCATCATTGTCTCCGTGCCAAATGTCGCGACACCTAAGCGGAGGGACGTGTGTCGCAGCCCGCGAGCTCCCGGCTGCGTCGTGGTCCCATGAATGAGGAGGCATCGTCCACCTCATAGCCGCGGGCGGGGGCGGCGGCTCGCGCCGCGCTGCCGGCAAATGCCACCCTCGCCGCCCCAGCGACAGCGCGAGCTCCAGCTCCTCCCGTGCCTCCCCGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0069700.1 | 10 | 13302997 | C | T |
| Osa10LNT0069700.1 | 10 | 13295349 | G | A |
| Osa10LNT0069700.1 | 10 | 13295568 | A | T |
| Osa10LNT0069700.1 | 10 | 13295711 | A | G |
| Osa10LNT0069700.1 | 10 | 13295975 | G | A |
| Osa10LNT0069700.1 | 10 | 13296801 | T | C |
| Osa10LNT0069700.1 | 10 | 13298019 | T | A |
| Osa10LNT0069700.1 | 10 | 13299694 | A | G |
| Osa10LNT0069700.1 | 10 | 13300270 | C | G |
| Osa10LNT0069700.1 | 10 | 13300435 | G | A |
| Osa10LNT0069700.1 | 10 | 13300644 | A | G |
| Osa10LNT0069700.1 | 10 | 13300990 | T | C |
| Osa10LNT0069700.1 | 10 | 13301063 | A | G |
| Osa10LNT0069700.1 | 10 | 13301175 | T | C |
| Osa10LNT0069700.1 | 10 | 13302181 | G | A |
| Osa10LNT0069700.1 | 10 | 13303136 | A | G |
| Osa10LNT0069700.1 | 10 | 13300542 | A | G |
| Osa10LNT0069700.1 | 10 | 13295160 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0069700.1 | osa-miR5788 | Cleavage | 3.5 | 14.489 | 1 | 21 |
| Osa10LNT0069700.1 | osa-miR5788 | Cleavage | 5.0 | 20.645 | 1 | 21 |
| Osa10LNT0069700.1 | osa-miR5516b | Translation | 5.0 | 16.079 | 1 | 21 |
| Osa10LNT0069700.1 | osa-miR319a-3p.2-3p | Translation | 4.5 | 18.491 | 1 | 20 |
| Osa10LNT0069700.1 | osa-miR319b | Translation | 4.5 | 18.491 | 1 | 20 |
| Osa10LNT0069700.1 | osa-miR160f-3p | Translation | 5.0 | 12.256 | 1 | 21 |
| Osa10LNT0069700.1 | osa-miR817 | Cleavage | 3.5 | 16.926 | 1 | 21 |
| Osa10LNT0069700.1 | osa-miR1435 | Translation | 4.0 | 12.732 | 1 | 20 |
| Osa10LNT0069700.1 | osa-miR2866 | Translation | 4.5 | 14.582 | 1 | 20 |
| Osa10LNT0069700.1 | osa-miR5144-5p | Translation | 4.5 | 14.352 | 1 | 21 |
| Osa10LNT0069700.1 | osa-miR5516a | Translation | 5.0 | 16.079 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0069700.1 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Osa10LNT0069700.1 | 10 | nan | Resistance or Tolerance | Other soil stress tolerance | R1629 | R2447 |
| Osa10LNT0069700.1 | 10 | qSPB2-1 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0069700.1 | 10 | qSPBp10-2 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0069700.1 | 10 | Phyllochron | Morphological trait | Culm/leaf | R1629 | R2447 |
| Osa10LNT0069700.1 | 10 | ssd10 | Morphological trait | Panicle/flower | RG257 | RZ583 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)