© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0070600.1
GAAAGAATTTCACTACTAACTGCATTCCCAGTTTCCAACTTTGTTTTTAACTAAAGGGCGTGTCCTAAGTAATTCTGCAGCCAACTGGATCAATGGCCTCTGCTAACATCGCCAACACAACATATCGGTGACAAAACACGAAAAATGGCTACAAAGCTACAAGCTTATACACACTCTCCTGTGGTCTGCCAGCAAAAGCATGTGATGTACAAAAACTTTACACAAAATGGGGGGGGCCAGGAAGGTAGGGGCGCTACTAGGGTTATGATCCTCCCGTTTTCTGCCGCTGCTTCATGCTAGCTCTCCGCGCTACGTCCCACGGCTTGTGCGGCACACCGACACCTTGCTGCGATGCAAAGAACGACTCGTATCCCGGGGAGTCGAAGGCGAACCCGGTGTGCTTCGAGCTCTCTCGGGGAAGCATGGAGATCGCATAGCTCCTTGCTTCTTCTGGGCTTAGATGGCTTGTCTCTGGAAGTTGTATCCTGCTGTACTCGTGGGGTTCATCCCTGTGCATCTCCTGGATTACTTGGTAGTCATAGGGGAAGAACCACCTTTGAATTGATAAATATAAGAAGTCGCCAAAGAGAGCGATGATTGGAACAAGCAATAGTGTGAGGTAGAAGAAAAACGTGCTCATCAAAACATAAATCACAAAATATACATTTTCCTGTCTGTCGAATGATGTCATTATTGCAGAGTAGATGAAGATGAACATAAACCAGGCTGTTATACTGCCAGCTACACTGATATAGTGCCATCTTGTTATAGAGTTGCATGACATTAGAAGTCGGAGATTCACAGTCACCACAACACAGGTGAAAGCCATTGTACTAACATCCCAAAGACCAAGAATCTTGCCGGATGAACCATGACCATACCGACTTGCAGCTGCAGTGAAGTAATAGAACACTATCGACTGATAGAAGGCAAAGAAAGCCCACACTGCTATCACCCTCCACTTGAAGAATGTATTCCTGATTCCTTCCTGGTAAAGCTTCGGATATTTTTTTGACAGAGACGCACTCACATCCTTATCAAACAATCCAACCATAATTACAGGTAGGGCCGTGAAAATGACATTATAAAGGGACTGGAACCAGTCATCATAAAATCGCTGACCGGAAAAACCAGTTTGGAAAGTGAACCAGAACTGAGTTAGCGTAAATGTCAGATTCTTGTAGAAAAAATATGTGATAACCTTGCACAATCTCAAATATGACCATCTTCCATGTACAAGGAGCAAGTCGGTAAGATATCGAAACTGAGCAATGGCAAAATCGCTAGCCATAACAGCTTGCATTCCTTCTTGTCCACTGATGCCAATCCCCACATGAGCAGCTTGAATCATACTCACATCATTAGCACCATCACCAATACTGAGAGTTATCTTATGGGCACCTTTCTTAACTAAGCTAGCAACCTGTGCTTTCTGCAATGGAGAAACCCGGCAACATACAACTGAGTGGCAAATTAAACTCAAACCAAGAAGATCTACACGCAGAGTTGGGTCTAGAGCATACATCAAGCATCTCCCATCAATAATGAGCGCCAATTTTTGTCCCGGTGTGCTAATTAGAGAACCGCGGGCTTCCTCATGGTAACTTTTAAGGCTCTGTTTTACTGATTCTTTTATAACACGTGCAATTTCCACTGGGTCTCCCCTGTCTTCAGCCTCTCTAATTACATCTGTCTCCGAGCTGATGATGAATTGTTTCATATCATTGTTCACCAGGCTGCAGGCATATGCTATATTAATTGCTGTTTCCATCTTATCTCCTGTTAAAACCCAAATTTTTATGCCAGCTGCAGAAAGAGTTTGAATGCAGGCAGGAACCCCTTCTTGCAGTTTGTCCTCAATAGCAGTACACCCTACCAATACAAGGTCTTTTTCAATCAACTCAGCCACCTCATCAAGCTTCTTATCACGATCACGTAAAGAAGATTTAGCTTGAATAAACTTCTCATTCCAGCTTTCATATTGCTCCCTGCTGAGATCTCGATAAGCGAGGCAAAGTGTGCGCAAGCCAGCAGAGCCAAATTGTTCTAGATGTTCTCTGCTGATCTTTTTAATGTCATTATTGCCATCAGCTAATCTTTCATAAACGACATTGTCAGCGCCCTTGCAATAGAGAACAAGCCTTCCATTTGGGAAACGGCAGACCACTGATTGACGCTTTCTTGTACTGTTGAATTCTAGAACATTCAGAATTTCATATGCAACGTCTTGTATGCTCCCCATCCTCTCAACATGTGATTCACGAACAATGACTGTAGTTGGTGTACGTCTATAAAAGAAGAAGCCAAAGTTCTTTGAAGCAGCCACAAGTGCAGCCTCATCAGGAGAAGCAGCTTGATAACTGATCTTTTCTGGTGTCTCCTCACCCTCAGGAAGAACCGTATGGCAGAGTGCAAGGCATCTGAAGAATTCCTTACAAGCTTCAGGATTAGGTTCATTTCTCCATGCACCACACATGATTCTGGCATCATCAAAGTTGAATCCTTTCTCGTGTACTGCAGCACCTGATCTTTTACCCTCATCACCGTCAATCTTGATTCCAGCTCGCTCAGCTCCACCTTTTTCGATCTCTGTGATGCCAGTTCCATATATCTCTCCAGCAATCGAACATTTAAAGAATTCCATCAAGTTTCTTGTAAGTGTTCCAGTTTTGTCAGAAAATATATATTCAACCTGCCCAAGTTCCTCGTTCAGATTAGAAGTTCGGGCCAAAGCTGGGGTGTTGCTCTCAGCATGGTACATATGCAGATCATTGTTAATGAACTGTGTGCACTGAATGAATTTGATCATCTCAATGGACACGTAAAGAGAAATAGGGATGATTGTTGAATATAGAGTTATTAGAGTAAACATGGTTAAAATGGTGACCACAAATTTGTTCTTAGGATTAAACTGGTCCTCCACTTTTCCACGCAAGCCAAGATAGAAATATTTCTCATTAATAAACACACCACTCCCAATAGCACCAATAACACACATTGTGAACAGGGTTGCAAATAGAGCAAGGATAAGTTTATCTAGCTTTTTTTCCAATGTACTTCTTTTGGAGGGAACATTCATGGAATTCATCATAACTTTTGTCTCATGACCTGTGAATATAACAACCCCCACAATGTACTCTGTGTTCCGAAGGCTACACCCTCTTAGTAGTACTTGATTTGGTGAGAGTGGCATGGTTTGCTTGTCCACAATAAGATTTCCAGTAAATGTATACAGTGAATTGTTTGGCTGCTCACACTGTATTTCACCTTTGAATTCAAAAGCCTTTTCAGGATTTTTGTAATCCCAGGTTTTCTCCAAAGCCTTCCTTATTTTCAGGTTGGTTTCCCCATCAAGATTTGCTGTCTCTATGTAGCAGACACCATCTGGGTTTGTGCTTGACAAGAAGAGCAAGTCTGCAGGGAAATAACCATCTTGTTTGATCCTCACAATATCTCCAACTTGTAGTCTTTTCCATGGAGTAGTTTCCCACTTTTGACCTTGTAACACATCGACATGTGCGTTATTAATTGACATGTCATTCTGGAAACGTTTCCAGTCCTCAAAAGCTTCCTTGATCAGAGAAACCAAAAGCACAAGACTAAGTGGAACAACATTGGTGACAGGATGAACTGGACTAATTGGTGTGGTCGACAATATAGAAATCATGAGAAAGTACAGATTTGCCACCCGCCTGAACTGTTCAAACAGCCCTTTAGGTAGAAAAGTCAGGACGTTATACTTTGTAGTCGACACAGAATTTCCCTTGTACCCGACGGGCGCGTTGGCCTCGCGGTCGTTGCAGCAGATGGTCCGCACGGACGGCGCCTGCGGCTGCGGCTGCCGCCTCAGGCTGGCCCCTCCGCCGCCGAGCCGCGCCGTCCTCGACGACTCCCCGCGGCCGAACGCGGAGTTCCCCGCGCCCCCACGCGGCGACGGCTCCCCGCCGAGCCGCGCGGTGGCGACCCGCACCATCTCCTTTATCCGCGAGCCCATCCTCCTCCCCCGCGGCGCCAAATCCGACGCGGAGGAGCCTCCGGCTCGCCGGGAGATCTCGGAACCACCACCCGCCGCCTCGGGGGGGCGGATCAACCGGGCGGCGGCCGAATCGAATCCGGCCGGGCTCGCGCGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0070600.1 | 10 | 14344254 | A | G |
| Osa10LNT0070600.1 | 10 | 14342139 | A | G |
| Osa10LNT0070600.1 | 10 | 14343424 | A | T |
| Osa10LNT0070600.1 | 10 | 14343760 | A | T |
| Osa10LNT0070600.1 | 10 | 14345293 | T | C |
| Osa10LNT0070600.1 | 10 | 14345655 | C | T |
| Osa10LNT0070600.1 | 10 | 14346322 | A | T |
| Osa10LNT0070600.1 | 10 | 14348174 | A | T |
| Osa10LNT0070600.1 | 10 | 14348389 | A | G |
| Osa10LNT0070600.1 | 10 | 14349798 | T | C |
| Osa10LNT0070600.1 | 10 | 14349824 | C | A |
| Osa10LNT0070600.1 | 10 | 14349830 | T | C |
| Osa10LNT0070600.1 | 10 | 14349966 | A | G |
| Osa10LNT0070600.1 | 10 | 14350277 | G | C |
| Osa10LNT0070600.1 | 10 | 14352354 | T | C |
| Osa10LNT0070600.1 | 10 | 14353134 | A | T |
| Osa10LNT0070600.1 | 10 | 14353136 | T | A |
| Osa10LNT0070600.1 | 10 | 14353157 | A | T |
| Osa10LNT0070600.1 | 10 | 14346380 | G | A |
| Osa10LNT0070600.1 | 10 | 14349362 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0070600.1 | osa-miR5836 | Cleavage | 5.0 | 13.822 | 1 | 21 |
| Osa10LNT0070600.1 | osa-miR5516b | Cleavage | 4.5 | 15.828 | 1 | 21 |
| Osa10LNT0070600.1 | osa-miR6247 | Translation | 5.0 | 14.224 | 1 | 21 |
| Osa10LNT0070600.1 | osa-miR818f | Cleavage | 5.0 | 12.141 | 1 | 21 |
| Osa10LNT0070600.1 | osa-miR393a | Translation | 4.5 | 16.476 | 1 | 21 |
| Osa10LNT0070600.1 | osa-miR172a | Cleavage | 4.5 | 10.518 | 1 | 21 |
| Osa10LNT0070600.1 | osa-miR172d-3p | Cleavage | 4.5 | 10.518 | 1 | 21 |
| Osa10LNT0070600.1 | osa-miR437 | Translation | 4.0 | 16.571 | 1 | 21 |
| Osa10LNT0070600.1 | osa-miR395w | Translation | 5.0 | 15.199 | 1 | 22 |
| Osa10LNT0070600.1 | osa-miR2092-5p | Cleavage | 5.0 | 11.268 | 1 | 21 |
| Osa10LNT0070600.1 | osa-miR2095-5p | Cleavage | 5.0 | 13.517 | 1 | 22 |
| Osa10LNT0070600.1 | osa-miR2105 | Translation | 5.0 | 7.736 | 1 | 20 |
| Osa10LNT0070600.1 | osa-miR2118f | Translation | 4.5 | 22.717 | 1 | 22 |
| Osa10LNT0070600.1 | osa-miR2118i | Translation | 4.5 | 22.717 | 1 | 22 |
| Osa10LNT0070600.1 | osa-miR2118j | Translation | 4.5 | 22.717 | 1 | 22 |
| Osa10LNT0070600.1 | osa-miR2118m | Translation | 4.5 | 22.717 | 1 | 22 |
| Osa10LNT0070600.1 | osa-miR2866 | Cleavage | 4.5 | 18.043 | 1 | 20 |
| Osa10LNT0070600.1 | osa-miR2866 | Cleavage | 5.0 | 13.781 | 1 | 20 |
| Osa10LNT0070600.1 | osa-miR3980a-3p | Cleavage | 5.0 | 14.593 | 1 | 21 |
| Osa10LNT0070600.1 | osa-miR3980b-3p | Cleavage | 5.0 | 14.593 | 1 | 21 |
| Osa10LNT0070600.1 | osa-miR5151 | Cleavage | 2.5 | 7.736 | 1 | 22 |
| Osa10LNT0070600.1 | osa-miR5497 | Cleavage | 5.0 | 20.295 | 1 | 21 |
| Osa10LNT0070600.1 | osa-miR5516a | Cleavage | 4.5 | 15.828 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0070600.1 | 10 | qSPB2-1 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0070600.1 | 10 | qSPBp10-2 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0070600.1 | 10 | Phyllochron | Morphological trait | Culm/leaf | R1629 | R2447 |
| Osa10LNT0070600.1 | 10 | ssd10 | Morphological trait | Panicle/flower | RG257 | RZ583 |
| Osa10LNT0070600.1 | 10 | nan | Resistance or Tolerance | Drought tolerance | RZ892 | BCD386 |
| Osa10LNT0070600.1 | 10 | nan | Resistance or Tolerance | Other soil stress tolerance | R1629 | R2447 |
| Osa10LNT0070600.1 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)