© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0070700.1
CATAAAAATGTCTCTCTCTCAGGAGATCTTTCCTTCTATAGAAAGTGATATTACAATGGGGCCGCTTAAAAACATCATGAGTTGGAAATGTAAGAGGTAATCAACATTACAAGCCTCCCTTTCATGAGGCCACTACCCTAAGCCTGCTGGTGCTGGTGGTCCTTCCCCGAGGATCCGCTTTCGTCCATCCCTCCTCAAGTCCCACACACCATGGAAGAATGTTCCACCGCATGGGTGCTGAAGTTAACCATCTATTCGCGACCTAAGGTGTCACCGTCTGATTCTAGGCTTGCACCGGAATTCTGCCAAGAGTGCTATATGATCCGAAGACCATTCAGGAGAAGGAAGGGCCGTGTCTTTTCTTAAACTTTCCTCATCCAAAAGTTCCAACAACGACTCCACTGACAATGAATCCGCTGTGTAAAATATGTAATCAACCGTTCCAGTGAAATCTCGTGTGCAGTTTGTGAAAAGTGGTTCATTTGTTGCAGGGTCCATCCTCCTCCGCTGGTGCTCCAAATCATAGCCGACACCGACCATTCTTGCAAATGAAGAATATGCACTCACCAGAGGAAGCTGATGGGTTAACTTGCTCGCAGGGCGTAAAATTCCAAGGGGATCTATGGCCAGATCTGGATGCAATTGATCAACTTTGCCCATAGCAAGAAGTCCATGTGGAGAACTCCCAGGGACTGAATTGAAATCCCCACAGACCAACATTGGAATGTCCGCACTAACAGCTATTTTTTCCAACCCTTTTAGGAGAGTTTGAACCTCCCACAGCTTCACATCTTTGAGGTCTTGATGGACATTTACGTGTGTATTTGCCACACAAAGAAGCTGCCTTTTGCCAGGATTGTCAGTTCCATGGTTGCCGAATTTAGCTTCTAAAACCGCAATCAGTGCAACATTATCCTTAATCAATCGACTCAAAGCAACTCTTCTTTGGGTAGAGGGAATAATTGCGTCTGTCAATGATTGTGCAGCCTTATTGAACTCAACCTCATATTTTTTAACGTGTGAAAATTTGTCTCTACGGAAAAAGGTGGCACAGCCATCGATGGCATGAGGAGCTCCAGTATATACCTCTGTTGTCCTTTTCTTGTAAAGTGCCTGATATCCATGTTTATCAAGCTCGGGTGAAAAAAAATCTTCGAAGTGGTTCAGTTGCACCTCCTGAAGACAGATGATATCAGCATGATAACCAATAATCTCACGCATCAAGTTCTGTCTTCTGTATGTCCAAGAAAGTGCCCATGTTGGGCAGTAGCTATACGCGTCACTTGTAGCATATGCATCAGCAAGAATATTGTAGGACAGCACTGAGAATGTCCCGAAAGATGTTTGGCTGTCCAAATCTAAGTGACTCAAAACATCTCCATTCACTTGGATAAGGCGACGTGGAGTTGGAGTTGGTGCTGGAATCACACGGGATGTCATAATTGAAGTTGGAGGTCCAACAGGTACCTTTTTTTCAGCATCCACAGACACGCATTCAAATCTTAGAACATGTCCAATATCATCAGCAGTTGGTGTATATGTCCGTGTGCGCCCCACTTCATACCAAGTTTCACCCGAGTTCTTATCAGTGCCTGAAGGATATAAAGGCACGGGGCCATTATTCAAACCAGGACTCTGTCCAAGATTTGACATCGATCCAGAACCAGTAGTACTAAGAACCCCAGAACCAGTGCTACCAAATCTGCCAAATAGCTCCTCTTCTTCAGCTCCATTTTCGTTTAATGCACTACTAGCTCGCTCATGCAAGACCCTATGGTGCTGCCATGCATCAGAGAAGCACTTAGCAGAACAATGGTAGCTCTTAGCAACAGGTATTTTTGACTTGACGCAACCAAGGCACTGAATTGTTGCTTGTTCCATTGGATGTACACTGCAGATTGCGACTTTTCGATCACTTTGTATACGGTACCATCTGTACCGCATGAAGTAGCCATCCGCAGGGGCGGCCTCCGGGACATCGTCGGTGGAGACGACGCCGGTGGGCAGCCGCAGCAGCACGTAGGGCGTGATCTCGCAGCCCACGATCGGGATCTCCGAGGGCAGGTGCACCCGCACCACGCTCAGCATCCTCCCCTCCGCTGCTCTCCTCCTCTTCTCCCCAGCTCCGGCACCACCACCACCACCACCGCCTCCGCCTCCCTCCGCTCACAGACGCAAGCGCTAGATCCCCCACCGCCAGGCGGATCCGCCATCACCTGCGCGCCGCCAGCGTTGCCTCCCCCGCGCGATCCAAGCACGCTCTTCCTGGTGGTGGGGGGTGGGGGGTTGGAAGCTTCTGGAAGGTACTGGAGACGCGGGGCGGGGCGGGGGAGCTTGCTAGGGTTTTGGGCGTAGAACTCGAACTCTATCTCGCTCTCGCTCTCTCCCCTCTTCCGTGTCCCGTGTCTTCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0070700.1 | 10 | 14359205 | A | G |
| Osa10LNT0070700.1 | 10 | 14359485 | T | A |
| Osa10LNT0070700.1 | 10 | 14359502 | G | A |
| Osa10LNT0070700.1 | 10 | 14360362 | C | T |
| Osa10LNT0070700.1 | 10 | 14362007 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0070700.1 | osa-miR5799 | Translation | 4.5 | 14.075 | 1 | 24 |
| Osa10LNT0070700.1 | osa-miR167a-3p | Translation | 5.0 | 24.049 | 1 | 22 |
| Osa10LNT0070700.1 | osa-miR396a-3p | Translation | 3.5 | 15.716 | 1 | 20 |
| Osa10LNT0070700.1 | osa-miR396b-3p | Translation | 3.5 | 15.716 | 1 | 20 |
| Osa10LNT0070700.1 | osa-miR399d | Cleavage | 5.0 | 16.107 | 1 | 21 |
| Osa10LNT0070700.1 | osa-miR399j | Cleavage | 5.0 | 16.107 | 1 | 21 |
| Osa10LNT0070700.1 | osa-miR1865-3p | Cleavage | 5.0 | 17.354 | 1 | 24 |
| Osa10LNT0070700.1 | osa-miR2101-5p | Cleavage | 4.5 | 9.564 | 1 | 22 |
| Osa10LNT0070700.1 | osa-miR396f-5p | Translation | 4.5 | 23.806 | 1 | 22 |
| Osa10LNT0070700.1 | osa-miR2878-5p | Translation | 5.0 | 10.514 | 1 | 24 |
| Osa10LNT0070700.1 | osa-miR5491 | Cleavage | 4.0 | 15.793 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0070700.1 | 10 | Phyllochron | Morphological trait | Culm/leaf | R1629 | R2447 |
| Osa10LNT0070700.1 | 10 | ssd10 | Morphological trait | Panicle/flower | RG257 | RZ583 |
| Osa10LNT0070700.1 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Osa10LNT0070700.1 | 10 | nan | Resistance or Tolerance | Other soil stress tolerance | R1629 | R2447 |
| Osa10LNT0070700.1 | 10 | nan | Resistance or Tolerance | Drought tolerance | RZ892 | BCD386 |
| Osa10LNT0070700.1 | 10 | qSPB2-1 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0070700.1 | 10 | qSPBp10-2 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)