© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0071100.1
GGGATCAGATCAGCAAATCAATTAGCACTTCAAGTACAGTTCATTCGGCAAATACTGCAACCTTGCAATCACAATGCAATGCACCATCCAAAACAAAAGGCACAGCAAAACCAAGCCGGTTAATGGAGGCGAAAATAGGATGGTCCTATGAGGTGAGAAACTATATGCTAAATATATATAGTTAGGTATCACCAGTGCTATCCCATGAAGGAAAAAAACACCGATGAGTTCAACCGCGTTTGGCAGGAGAACGGTTTGCAGGAGTGGTCGATGGGCACGTGCAGAACAAGGAACCCCTCTTACGAGGGTTTACCGAGCTGGGGCTTGGGTTGGGAGGGCATAGATGGGCAATTCATGGTGGTGAGGCCTGGGAGGCTCGCAGTGTAGTTAAGGATCCACCACATCTTTGCAACAAGAGGGCCTCTAGTTTGCCTTTCACTACAATAGCCAACCTTGATTCCACCCACCAATGGCAATGCATTGCCCTTTGCTGGTCCAAGAGCAGCGATGGATTCCTCCCATGACACTATATTTGATATACATGTGGCAAACATAGCTAGAAACTGCAAAAGTGAATGGAAAACTCTGTAAATTATGATAAGATGTAGAGAACCGAACTCAAAATAAATTATCTTCTAGCTTCTGAGAGAAAAACCAATGTTCAGAGATTCTGTCTGAAAGTGAGGATAGAAACATGAACTCACTAACAAAGATACTACGGAAAAGGATGGCCAGGAAAGCTAAGTGCAAGCAATCATACTGAGTTGATAATAGGAATCTGATATCAAACAATATCTGATACACGAGACACTACACAAGGTACTGCCACTATACACATAACTTCCATGACCATGCAGAGGTCAAGTCTCCCAAGGATCTGAAACCAATCCTTATATAGGAAGACAACCAGGCTTCATGATCTACTAGTAGCTTGTACAGCCCCACCACTATGAAACAATGACGCAACCGATCTTGCTAGTGGAGTTGGTTGTCGTATGCATTTAATTTGGACCTATACAAAGAAATGGATCTTGCATTGCTTAACAATTAAACACCCTGTTTTTAAGTAAAAATTACTACCAAATGGAGTTAGAGTGAACTTGTCAGTCATGATGACTAATGCAAGACTACGATGACGAAGAACTCCGATGAGAACACATGCAGGTCAATACAAAGCAGGTGAAAGTTGTTGAGGCGGTAGGTGTGTGTTGATCAAATCATATGGTAATTGAAACTGACATAATTTGCAATTTGGAGCATGTTTTCAATTGTTAGCATATAGGAGTAGAACAACTCAAAGCAAAGAAACTATAATGAATAAAAAAAACTAATGATTTGATGCCATGACATAAGCTGCAACAAGCGTAGCTGTCTAGCACACACTCTCTGCAAAATATACTAACTAACAACTATTGATGAAAGAGATTTGTGTTTGAACATCTGTATAGTATTGTGGGATTCAAGACATATTACATATGTTAGTTTTTTTTACATGATGATAGAGATATTGTAGAGATTTTTTTTTGTGAGCATTTGAAATTTGAACACAGATCAAAGAAACAATCCAAAATGAGTGCACAGCTTATGTGGTCTAGAGAAATTAGTTAGAAGTGCAATGTGTAAACAAAATTTAATGCCCATCGATGTTTCTATGTATGACATGAAGGTGTGATTGAACTAAATTTCTCATGATTTATGGTAGTTGGATACAATGTGAACCATCTACATTCAGAATTCAGTGAACAGGGAATCATGGCTGAAAAGAAAAAAAAAGGCATAATACATATAGTGTAATTAGCAAAAGATTAGGACAAATCGAGTCCATGACATTACATTACAATACAGCATAACCAGTCAATCCATGTGTTGCACAAATCCAAGAAAGATGACTAAGACTACCACAGTTCAGGGAGAATCGGAACCTTGCTCGGCAAAGGTCCAATATATTTAATTTTTCCCAATCTTTCATGGACCCCAATATCACAACTAAAGTTGATTCATTTACCTAATCCCCAAAGCTGGGTGACAAATGAAAATCAGTGTTGATGTGCTTTTGAATAAAGCAACACTTTTATATAAGAAATTTCTGGATAATTATGAAATGGCAAGCATTTGGTAGCCATATTTTCGATGACATGTTAGGCTTTTAGAGAGTAAACATATTCAAGAACAAATTCATATTTCAGTAACACGACCTTTACAAAGTAAATACAAGTTGATCATTTCCAGGTAATAAGACCCCTTGCAAACTTGCTCATGATCCTGATAGAAGTTTCATACAGTGGTTGTTTTGTAAGCTATGGATTTGTGTCAAAATAGGGGGGGAAATATAGGGAATACATCCATAAATTACACTTCAATAGGCATATGTACCGTTTATCTGGCTATCCTAAACCAGATCTGTTACTAAGGTGTAACACATTTTCCCCAATTTGTCATCCCAACCAACCACAAATCCTGAACGCAGACTCATTGCACTGTAACAAGGTCCTAAAACAAAATCTCATTGATAATGTGAACCACACATGACAAAACTCCTTAATTAGCACCGGAAGGCCCAAGGGTTTGCTTAATCCATATTGATCCATGGGCTATTGCTAGAGAACAAACATTGCTACCGAAGAACGCATCAAAAGCACAATCAAGAATAGACGCCATCAACCCATTTGCTATGACTCATGAGAGCAACCACGGCCCAGCCTGAGTCATCCACCACACCACAGCAACAATTGGGTGTGTTTGGTTGCTTGCATTTTCCTAGCCTGGCTCATCTCTTTCATCCTGGTTGAGTCTAGCCCAGATGAAGAGATACACATGCAACTGTTTTGGTTGTTTGCATCGGTTTAGCCCGGCTGAGATGAGATTTTGTTTGGTTGAGTGCATGAGAGATGCGGTTTGGAAAATATTTTGTTTGGTTGGTTGGATAGATTTGAGTCTGGTTACCTCTTCATTTAATTGGGTGAGGTTACCTCTATAATATCCCATACAAAAATTTCAAATCTAGACAATAGGTATAAACAATTTTTCACATACAAAGAATAATATTGGTATTAAAAATCAGCCAGCATTCTTTGCACCAAAGCGAAATTTGTTGAGTTCTCAAAAAAAAAAAGTCACCAAAATTTCCCCACCATTTGACTGCAAAGCGCTGGAAAAAAAAAGAAAAGAAAGATAGAAGCGTTTGTCCTCCTCATTGTCGTCGAGGAGAGGAGTTCTTGCCTCATCGCTGCCAGCCGTTCCCGGCTCCTCTGCCGCCGGCCGGCCAGTACCACGCTCCTCCGTCGCTGGCCTCTCATACGGATCTGCCACGCGCGCTCCTCCGCTCTTCTCTCAATTGAAAATAGAAAAGAGAAAACAAAAAAAAATCCCCTCAATCTCATCGTTGACTTGCTTCACCGGCGCTCCCAGCTGCTCCTAGCTGCTCAACGCCACCATGGTCGCCGGATCTGGTGGCCTGGCGGTCGGAGAAGGCGATTGTGGCGACAGAAAAGAGAGGCGGCGCCGGCAATGGCGAGGAAGCCGGCGATGGAGATGGCAAGGGATGTAATAGCGGCTGCAGCTTCTCCACCGGGGTCGGCCGAGGGAGCTCGAGGTCGGCCGCCAGTCCACCATCGGAGAAGACGCCGAACGAGTGGTGGTGACCGTAGGGGATTTGGTGGAGGCGGCGGCGGCAAGGGAGAGAGGGAAGAGGAGAGCAGTTGAGAAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0071100.1 | 10 | 14519299 | A | G |
| Osa10LNT0071100.1 | 10 | 14513443 | T | A |
| Osa10LNT0071100.1 | 10 | 14514356 | C | T |
| Osa10LNT0071100.1 | 10 | 14514757 | T | C |
| Osa10LNT0071100.1 | 10 | 14515705 | G | C |
| Osa10LNT0071100.1 | 10 | 14515839 | G | A |
| Osa10LNT0071100.1 | 10 | 14515878 | T | G |
| Osa10LNT0071100.1 | 10 | 14517527 | A | G |
| Osa10LNT0071100.1 | 10 | 14517931 | C | T |
| Osa10LNT0071100.1 | 10 | 14518823 | A | C |
| Osa10LNT0071100.1 | 10 | 14519243 | A | G |
| Osa10LNT0071100.1 | 10 | 14520125 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0071100.1 | osa-miR5534b | Cleavage | 5.0 | 20.851 | 1 | 21 |
| Osa10LNT0071100.1 | osa-miR160a-3p | Translation | 5.0 | 20.277 | 1 | 21 |
| Osa10LNT0071100.1 | osa-miR160b-3p | Translation | 5.0 | 20.277 | 1 | 21 |
| Osa10LNT0071100.1 | osa-miR160c-3p | Translation | 4.5 | 19.81 | 1 | 21 |
| Osa10LNT0071100.1 | osa-miR167a-3p | Cleavage | 5.0 | 18.496 | 1 | 22 |
| Osa10LNT0071100.1 | osa-miR1424 | Cleavage | 4.5 | 18.943 | 1 | 21 |
| Osa10LNT0071100.1 | osa-miR1440a | Cleavage | 5.0 | 12.588 | 1 | 20 |
| Osa10LNT0071100.1 | osa-miR1853-5p | Cleavage | 3.5 | 21.359 | 1 | 24 |
| Osa10LNT0071100.1 | osa-miR1319a | Translation | 4.5 | 13.958 | 1 | 24 |
| Osa10LNT0071100.1 | osa-miR2101-5p | Cleavage | 5.0 | 15.264 | 1 | 22 |
| Osa10LNT0071100.1 | osa-miR2101-5p | Cleavage | 5.0 | 14.279 | 1 | 22 |
| Osa10LNT0071100.1 | osa-miR2101-5p | Translation | 5.0 | 11.392 | 1 | 22 |
| Osa10LNT0071100.1 | osa-miR2118l | Cleavage | 5.0 | 15.285 | 1 | 22 |
| Osa10LNT0071100.1 | osa-miR2876-3p | Cleavage | 5.0 | 10.957 | 1 | 21 |
| Osa10LNT0071100.1 | osa-miR2876-3p | Translation | 5.0 | 13.358 | 1 | 21 |
| Osa10LNT0071100.1 | osa-miR2876-3p | Cleavage | 4.5 | 16.878 | 1 | 21 |
| Osa10LNT0071100.1 | osa-miR1863b | Translation | 5.0 | 12.331 | 1 | 24 |
| Osa10LNT0071100.1 | osa-miR1863b.2 | Cleavage | 4.0 | 16.449 | 1 | 23 |
| Osa10LNT0071100.1 | osa-miR2924 | Translation | 4.0 | 16.164 | 1 | 21 |
| Osa10LNT0071100.1 | osa-miR3979-5p | Cleavage | 4.5 | 13.042 | 1 | 20 |
| Osa10LNT0071100.1 | osa-miR5157a-3p | Cleavage | 4.0 | 16.115 | 1 | 24 |
| Osa10LNT0071100.1 | osa-miR5157b-3p | Cleavage | 4.0 | 16.115 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0071100.1 | 10 | qSPB2-1 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0071100.1 | 10 | qSPBp10-2 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0071100.1 | 10 | ssd10 | Morphological trait | Panicle/flower | RG257 | RZ583 |
| Osa10LNT0071100.1 | 10 | Phyllochron | Morphological trait | Culm/leaf | R1629 | R2447 |
| Osa10LNT0071100.1 | 10 | nan | Resistance or Tolerance | Other soil stress tolerance | R1629 | R2447 |
| Osa10LNT0071100.1 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Osa10LNT0071100.1 | 10 | nan | Resistance or Tolerance | Drought tolerance | RZ892 | BCD386 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)